RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 ADAMTSL4-AS1Q5T5F5 129 aa11.26□□□□□ -0.61
UPK3B-203ENST00000394849 S100A12P80511 92 aa11.25□□□□□ -0.61
UPK3B-203ENST00000394849 PRLHP81277 87 aa11.25□□□□□ -0.61
UPK3B-203ENST00000394849 ANKRD39Q53RE8 183 aa11.25□□□□□ -0.61
UPK3B-203ENST00000394849 TIMM17BO60830 172 aa11.24□□□□□ -0.61
UPK3B-203ENST00000394849 TRBV10-3A0A0K0K1G6 114 aa11.23□□□□□ -0.61
UPK3B-203ENST00000394849 PRYO14603 147 aa11.23□□□□□ -0.61
UPK3B-203ENST00000394849 SCGB1D4Q6XE38 83 aa11.23□□□□□ -0.61
UPK3B-203ENST00000394849 SPANXB1Q9NS25 103 aaPredicted RBP11.23□□□□□ -0.61
UPK3B-203ENST00000394849 TRBV10-2A0A0K0K1G8 114 aa11.22□□□□□ -0.61
UPK3B-203ENST00000394849 NDUFC2O95298 119 aa11.22□□□□□ -0.61
UPK3B-203ENST00000394849 SEC61BP60468 96 aaKnown RBP11.22□□□□□ -0.61
UPK3B-203ENST00000394849 SOSTDC1Q6X4U4 206 aa11.22□□□□□ -0.61
UPK3B-203ENST00000394849 C4orf48Q5BLP8 95 aa11.21□□□□□ -0.61
UPK3B-203ENST00000394849 LITAFQ99732 161 aa11.21□□□□□ -0.61
UPK3B-203ENST00000394849 C5orf52A6NGY3 159 aa11.2□□□□□ -0.62
UPK3B-203ENST00000394849 HSBP1L1C9JCN9 74 aa11.2□□□□□ -0.62
UPK3B-203ENST00000394849 DDTP30046 118 aa11.2□□□□□ -0.62
UPK3B-203ENST00000394849 KRTAP13-3Q3SY46 172 aa11.2□□□□□ -0.62
UPK3B-203ENST00000394849 S100A7L2Q5SY68 101 aa11.2□□□□□ -0.62
UPK3B-203ENST00000394849 LINC00308Q8TCZ7 52 aa11.2□□□□□ -0.62
UPK3B-203ENST00000394849 KCNQ1DNQ9H478 68 aa11.19□□□□□ -0.62
UPK3B-203ENST00000394849 ETDCA0A1B0GVM5 59 aa11.18□□□□□ -0.62
UPK3B-203ENST00000394849 EIF4EBP3O60516 100 aaPredicted RBP11.18□□□□□ -0.62
UPK3B-203ENST00000394849 C3orf22Q8N5N4 141 aa11.18□□□□□ -0.62
UPK3B-203ENST00000394849 HIGD2AQ9BW72 106 aa11.18□□□□□ -0.62
UPK3B-203ENST00000394849 SCGB1D1O95968 90 aa11.17□□□□□ -0.62
UPK3B-203ENST00000394849 PCP2Q8IVA1 136 aa11.17□□□□□ -0.62
UPK3B-203ENST00000394849 SPANXCQ9NY87 97 aa11.16□□□□□ -0.62
UPK3B-203ENST00000394849 SPRR1AP35321 89 aa11.15□□□□□ -0.62
UPK3B-203ENST00000394849 SPANXDQ9BXN6 97 aa11.14□□□□□ -0.63
UPK3B-203ENST00000394849 IGLV6-57P01721 117 aa11.13□□□□□ -0.63
UPK3B-203ENST00000394849 COPS9Q8WXC6 57 aa11.13□□□□□ -0.63
UPK3B-203ENST00000394849 OR13C6PQ8NH95 151 aa11.12□□□□□ -0.63
UPK3B-203ENST00000394849 ZNF706Q9Y5V0 76 aaPredicted RBP11.12□□□□□ -0.63
UPK3B-203ENST00000394849 TRAV23DV6A0A075B6W5 121 aa11.11□□□□□ -0.63
UPK3B-203ENST00000394849 KRTAP4-1Q9BYQ7 146 aa11.11□□□□□ -0.63
UPK3B-203ENST00000394849 CBY1Q9Y3M2 126 aa11.11□□□□□ -0.63
UPK3B-203ENST00000394849 KRTAP4-16G5E9R7 235 aaPredicted RBP11.1□□□□□ -0.63
UPK3B-203ENST00000394849 SPINK1P00995 79 aa11.1□□□□□ -0.63
UPK3B-203ENST00000394849 IFITM1P13164 125 aa11.1□□□□□ -0.63
UPK3B-203ENST00000394849 Q6ZVH6 145 aa11.1□□□□□ -0.63
UPK3B-203ENST00000394849 LINC00518Q8N0U6 118 aa11.09□□□□□ -0.63
UPK3B-203ENST00000394849 SPRR4Q96PI1 79 aa11.09□□□□□ -0.63
UPK3B-203ENST00000394849 B5MCH6 92 aa11.08□□□□□ -0.64
UPK3B-203ENST00000394849 SMCR5Q8TEV8 140 aa11.07□□□□□ -0.64
UPK3B-203ENST00000394849 ZNF73O43830 326 aaPredicted RBP11.06□□□□□ -0.64
UPK3B-203ENST00000394849 HINT1P49773 126 aaPredicted RBP11.06□□□□□ -0.64
UPK3B-203ENST00000394849 MUSTN1Q8IVN3 82 aa11.06□□□□□ -0.64
UPK3B-203ENST00000394849 Q8NBF4 154 aa11.06□□□□□ -0.64
UPK3B-203ENST00000394849 Q6ZRX8 168 aa11.05□□□□□ -0.64
UPK3B-203ENST00000394849 JOSD1Q15040 202 aaPredicted RBP11.04□□□□□ -0.64
UPK3B-203ENST00000394849 RPS29P62273 56 aaKnown RBP11.02□□□□□ -0.65
UPK3B-203ENST00000394849 CFC1BP0CG36 223 aa11.01□□□□□ -0.65
UPK3B-203ENST00000394849 TMA7Q9Y2S6 64 aaKnown RBP11.01□□□□□ -0.65
UPK3B-203ENST00000394849 A6NDN8 102 aa11□□□□□ -0.65
UPK3B-203ENST00000394849 Q9BRP9 147 aa11□□□□□ -0.65
UPK3B-203ENST00000394849 COX8AP10176 69 aa10.99□□□□□ -0.65
UPK3B-203ENST00000394849 XP32Q5T750 250 aa10.99□□□□□ -0.65
UPK3B-203ENST00000394849 PAM16Q9Y3D7 125 aa10.99□□□□□ -0.65
UPK3B-203ENST00000394849 ERC2-IT1O76042 136 aa10.98□□□□□ -0.65
UPK3B-203ENST00000394849 LCE2CQ5TA81 110 aa10.98□□□□□ -0.65
UPK3B-203ENST00000394849 VAMP8Q9BV40 100 aa10.98□□□□□ -0.65
UPK3B-203ENST00000394849 SPATA45Q537H7 98 aa10.97□□□□□ -0.65
UPK3B-203ENST00000394849 GAGE2AQ6NT46 116 aa10.97□□□□□ -0.65
UPK3B-203ENST00000394849 TRAV13-2A0A0B4J235 113 aa10.96□□□□□ -0.65
UPK3B-203ENST00000394849 C6orf99Q4VX62 202 aa10.96□□□□□ -0.65
UPK3B-203ENST00000394849 SLC25A20O43772 301 aa10.95□□□□□ -0.66
UPK3B-203ENST00000394849 COX7BP24311 80 aa10.95□□□□□ -0.66
UPK3B-203ENST00000394849 C14orf144Q96I85 54 aa10.95□□□□□ -0.66
UPK3B-203ENST00000394849 DLEU1O43261 78 aa10.94□□□□□ -0.66
UPK3B-203ENST00000394849 Q8N377 158 aa10.94□□□□□ -0.66
UPK3B-203ENST00000394849 HIST1H4GQ99525 98 aa10.94□□□□□ -0.66
UPK3B-203ENST00000394849 LINC00483Q53H64 154 aa10.93□□□□□ -0.66
UPK3B-203ENST00000394849 A4D1N5 150 aa10.92□□□□□ -0.66
UPK3B-203ENST00000394849 SSBP3-AS1Q7Z2R9 100 aa10.92□□□□□ -0.66
UPK3B-203ENST00000394849 DHRS4-AS1Q9P1J3 65 aa10.92□□□□□ -0.66
UPK3B-203ENST00000394849 ELOF1P60002 83 aaKnown RBP10.91□□□□□ -0.66
UPK3B-203ENST00000394849 MT1HP80294 61 aa10.9□□□□□ -0.66
UPK3B-203ENST00000394849 SLC25A34Q6PIV7 304 aa10.9□□□□□ -0.66
UPK3B-203ENST00000394849 ST20-AS1Q8NBB2 130 aa10.89□□□□□ -0.67
UPK3B-203ENST00000394849 TRBV7-6A0A0J9YX20 115 aa10.88□□□□□ -0.67
UPK3B-203ENST00000394849 A0A1B0GWB2 263 aa10.88□□□□□ -0.67
UPK3B-203ENST00000394849 KRTAP19-2Q3LHN2 52 aa10.88□□□□□ -0.67
UPK3B-203ENST00000394849 IGLV9-49A0A0B4J1Y8 123 aa10.87□□□□□ -0.67
UPK3B-203ENST00000394849 PYY3Q5JQD4 70 aa10.87□□□□□ -0.67
UPK3B-203ENST00000394849 SMIM11BQ8TCY0 68 aa10.87□□□□□ -0.67
UPK3B-203ENST00000394849 MOBPQ13875 183 aa10.86□□□□□ -0.67
UPK3B-203ENST00000394849 C12orf57Q99622 126 aa10.86□□□□□ -0.67
UPK3B-203ENST00000394849 HIGD1BQ9P298 99 aa10.86□□□□□ -0.67
UPK3B-203ENST00000394849 LORP23490 312 aaPredicted RBP10.82□□□□□ -0.68
UPK3B-203ENST00000394849 VAMP3Q15836 100 aa10.82□□□□□ -0.68
UPK3B-203ENST00000394849 TAL2Q16559 108 aa10.82□□□□□ -0.68
UPK3B-203ENST00000394849 C9orf153Q5TBE3 101 aa10.82□□□□□ -0.68
UPK3B-203ENST00000394849 C2orf91Q6ZV80 131 aa10.82□□□□□ -0.68
UPK3B-203ENST00000394849 NHP2Q9NX24 153 aaKnown RBP10.81□□□□□ -0.68
UPK3B-203ENST00000394849 DEFB105AQ8NG35 78 aa10.8□□□□□ -0.68
UPK3B-203ENST00000394849 SPRR1BP22528 89 aa10.79□□□□□ -0.68
UPK3B-203ENST00000394849 KRTAP10-6P60371 365 aaPredicted RBP10.79□□□□□ -0.68
UPK3B-203ENST00000394849 IGLV8-61A0A075B6I0 122 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms