RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 Q6ZTC4 211 aa8.94□□□□□ -0.98
NFKB1-202ENST00000394820 LELP1Q5T871 98 aa8.93□□□□□ -0.98
NFKB1-202ENST00000394820 COX17Q14061 63 aa8.93□□□□□ -0.98
NFKB1-202ENST00000394820 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.93□□□□□ -0.98
NFKB1-202ENST00000394820 SYCNQ0VAF6 134 aa8.92□□□□□ -0.98
NFKB1-202ENST00000394820 KIAA0087Q14695 138 aa8.92□□□□□ -0.98
NFKB1-202ENST00000394820 TMEM254Q8TBM7 123 aa8.91□□□□□ -0.98
NFKB1-202ENST00000394820 FAM19A3Q7Z5A8 133 aa8.91□□□□□ -0.98
NFKB1-202ENST00000394820 PSPHP1O15172 72 aa8.9□□□□□ -0.98
NFKB1-202ENST00000394820 PDE6GP18545 87 aa8.9□□□□□ -0.98
NFKB1-202ENST00000394820 DEFB131BA0A096LNP1 70 aa8.9□□□□□ -0.99
NFKB1-202ENST00000394820 TRBV7-6A0A0J9YX20 115 aa8.9□□□□□ -0.99
NFKB1-202ENST00000394820 OXTP01178 125 aa8.9□□□□□ -0.99
NFKB1-202ENST00000394820 M0R378 163 aa8.89□□□□□ -0.99
NFKB1-202ENST00000394820 LYPD5Q6UWN5 251 aa8.89□□□□□ -0.99
NFKB1-202ENST00000394820 KMT2BQ9UMN6 2715 aaPredicted RBP8.88□□□□□ -0.99
NFKB1-202ENST00000394820 NDUFC2-KCTD14E9PQ53 114 aa8.88□□□□□ -0.99
NFKB1-202ENST00000394820 LINC00336Q6ZUF6 198 aa8.87□□□□□ -0.99
NFKB1-202ENST00000394820 SERP1Q9Y6X1 66 aa8.87□□□□□ -0.99
NFKB1-202ENST00000394820 UBE2DNLQ8IWF7 75 aa8.86□□□□□ -0.99
NFKB1-202ENST00000394820 ST20-AS1Q8NBB2 130 aa8.86□□□□□ -0.99
NFKB1-202ENST00000394820 LINC01600Q96MT4 127 aa8.86□□□□□ -0.99
NFKB1-202ENST00000394820 SMIM26A0A096LP01 95 aa8.85□□□□□ -0.99
NFKB1-202ENST00000394820 SMIM29Q86T20 159 aa8.85□□□□□ -0.99
NFKB1-202ENST00000394820 Q8NAQ8 132 aa8.85□□□□□ -0.99
NFKB1-202ENST00000394820 C11orf45Q8TAV5 145 aa8.85□□□□□ -0.99
NFKB1-202ENST00000394820 NDUFS5O43920 106 aa8.84□□□□□ -0.99
NFKB1-202ENST00000394820 C1orf137Q5JT78 98 aa8.84□□□□□ -0.99
NFKB1-202ENST00000394820 H7BZZ5 65 aa8.83□□□□□ -1
NFKB1-202ENST00000394820 RPS28P62857 69 aaKnown RBP8.83□□□□□ -1
NFKB1-202ENST00000394820 SPTSSBQ8NFR3 76 aa8.83□□□□□ -1
NFKB1-202ENST00000394820 FAM168BA1KXE4 195 aa8.83□□□□□ -1
NFKB1-202ENST00000394820 H0Y9J4 135 aa8.82□□□□□ -1
NFKB1-202ENST00000394820 TENM3Q9P273 2699 aa8.82□□□□□ -1
NFKB1-202ENST00000394820 PRYO14603 147 aa8.82□□□□□ -1
NFKB1-202ENST00000394820 PRLHP81277 87 aa8.81□□□□□ -1
NFKB1-202ENST00000394820 ESRGQ1W209 222 aa8.81□□□□□ -1
NFKB1-202ENST00000394820 Q6ZRP5 223 aa8.81□□□□□ -1
NFKB1-202ENST00000394820 LINC00612Q8N6U2 182 aa8.8□□□□□ -1
NFKB1-202ENST00000394820 EGFEM1PQ0D2K5 195 aa8.79□□□□□ -1
NFKB1-202ENST00000394820 C7orf33Q8WU49 177 aa8.79□□□□□ -1
NFKB1-202ENST00000394820 IGLV6-57P01721 117 aa8.78□□□□□ -1
NFKB1-202ENST00000394820 LINC00208Q96KT6 92 aa8.78□□□□□ -1
NFKB1-202ENST00000394820 OBSCN-AS1Q96MR7 158 aa8.78□□□□□ -1
NFKB1-202ENST00000394820 CSMD3Q7Z407 3707 aa8.77□□□□□ -1.01
NFKB1-202ENST00000394820 A0A087WSZ3 146 aa8.77□□□□□ -1.01
NFKB1-202ENST00000394820 KRTAP10-11P60412 298 aa8.77□□□□□ -1.01
NFKB1-202ENST00000394820 SERTAD4-AS1Q5TG53 156 aa8.77□□□□□ -1.01
NFKB1-202ENST00000394820 MP68P56378 58 aa8.76□□□□□ -1.01
NFKB1-202ENST00000394820 STAB2Q8WWQ8 2551 aa8.76□□□□□ -1.01
NFKB1-202ENST00000394820 VPREB1P12018 145 aa8.75□□□□□ -1.01
NFKB1-202ENST00000394820 ELOF1P60002 83 aaKnown RBP8.75□□□□□ -1.01
NFKB1-202ENST00000394820 RPL37AP61513 92 aaKnown RBP8.75□□□□□ -1.01
NFKB1-202ENST00000394820 KRTAP24-1Q3LI83 254 aa8.75□□□□□ -1.01
NFKB1-202ENST00000394820 CXCL6P80162 114 aa8.75□□□□□ -1.01
NFKB1-202ENST00000394820 LOC110117498A0A087WWA1 95 aa8.74□□□□□ -1.01
NFKB1-202ENST00000394820 UBE2AP49459 152 aa8.74□□□□□ -1.01
NFKB1-202ENST00000394820 C1orf195Q5TG92 126 aa8.74□□□□□ -1.01
NFKB1-202ENST00000394820 NDUFC1O43677 76 aa8.73□□□□□ -1.01
NFKB1-202ENST00000394820 Q5XG85 94 aa8.72□□□□□ -1.01
NFKB1-202ENST00000394820 LINC00167Q96N53 147 aa8.72□□□□□ -1.01
NFKB1-202ENST00000394820 TENM2Q9NT68 2774 aa8.71□□□□□ -1.02
NFKB1-202ENST00000394820 H3BQ85 93 aa8.7□□□□□ -1.02
NFKB1-202ENST00000394820 CASC10Q5T4H9 136 aa8.7□□□□□ -1.02
NFKB1-202ENST00000394820 PRO0628Q9UI54 55 aa8.7□□□□□ -1.02
NFKB1-202ENST00000394820 PCOTHQ58A44 107 aa8.7□□□□□ -1.02
NFKB1-202ENST00000394820 K7EQZ3 153 aa8.69□□□□□ -1.02
NFKB1-202ENST00000394820 FAM229BQ4G0N7 80 aa8.68□□□□□ -1.02
NFKB1-202ENST00000394820 IGLV9-49A0A0B4J1Y8 123 aa8.68□□□□□ -1.02
NFKB1-202ENST00000394820 LINC00528Q8N1L1 170 aa8.68□□□□□ -1.02
NFKB1-202ENST00000394820 Q8N377 158 aa8.68□□□□□ -1.02
NFKB1-202ENST00000394820 TRBV7-4A0A0J9YYF1 115 aa8.67□□□□□ -1.02
NFKB1-202ENST00000394820 KLKP1Q107X0 134 aa8.67□□□□□ -1.02
NFKB1-202ENST00000394820 ERC2-IT1O76042 136 aa8.67□□□□□ -1.02
NFKB1-202ENST00000394820 CDK2AP2O75956 126 aa8.67□□□□□ -1.02
NFKB1-202ENST00000394820 SPINK6Q6UWN8 80 aa8.67□□□□□ -1.02
NFKB1-202ENST00000394820 IGKV4-1P06312 121 aa8.66□□□□□ -1.02
NFKB1-202ENST00000394820 C15orf56Q8N910 161 aa8.66□□□□□ -1.02
NFKB1-202ENST00000394820 DHRS4-AS1Q9P1J3 65 aa8.66□□□□□ -1.02
NFKB1-202ENST00000394820 CHKB-CPT1BH3BT56 60 aa8.66□□□□□ -1.02
NFKB1-202ENST00000394820 V9GYY9 64 aa8.65□□□□□ -1.02
NFKB1-202ENST00000394820 MRPL55Q7Z7F7 128 aaKnown RBP8.65□□□□□ -1.02
NFKB1-202ENST00000394820 CHTF8P0CG12 524 aa8.64□□□□□ -1.03
NFKB1-202ENST00000394820 FP248Q71RG6 208 aaPredicted RBP8.64□□□□□ -1.03
NFKB1-202ENST00000394820 PRR34Q9NV39 138 aa8.64□□□□□ -1.03
NFKB1-202ENST00000394820 REG3GQ6UW15 175 aa8.61□□□□□ -1.03
NFKB1-202ENST00000394820 A0A1W2PNM2 257 aa8.61□□□□□ -1.03
NFKB1-202ENST00000394820 LINC00476Q8WZB0 136 aa8.61□□□□□ -1.03
NFKB1-202ENST00000394820 Q9BRP9 147 aa8.6□□□□□ -1.03
NFKB1-202ENST00000394820 Q6ZRX8 168 aa8.6□□□□□ -1.03
NFKB1-202ENST00000394820 HCG22E2RYF7 251 aa8.6□□□□□ -1.03
NFKB1-202ENST00000394820 PMAIP1Q13794 54 aa8.6□□□□□ -1.03
NFKB1-202ENST00000394820 PRR15LQ9BU68 103 aa8.6□□□□□ -1.03
NFKB1-202ENST00000394820 A6NED7 52 aa8.59□□□□□ -1.03
NFKB1-202ENST00000394820 A8MUN3 132 aa8.59□□□□□ -1.03
NFKB1-202ENST00000394820 NDUFB1O75438 58 aa8.59□□□□□ -1.03
NFKB1-202ENST00000394820 ATP5EP56381 51 aaPredicted RBP8.59□□□□□ -1.03
NFKB1-202ENST00000394820 Q8NBF4 154 aa8.58□□□□□ -1.04
NFKB1-202ENST00000394820 C1orf64Q8NEQ6 169 aa8.58□□□□□ -1.04
NFKB1-202ENST00000394820 CASC2Q6XLA1 102 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms