RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 IGHV4-30-4P0DP06 118 aa6□□□□□ -1.45
RTN4-206ENST00000394611 LINC00208Q96KT6 92 aa5.99□□□□□ -1.45
RTN4-206ENST00000394611 VWFP04275 2813 aa5.99□□□□□ -1.45
RTN4-206ENST00000394611 CHKB-CPT1BH3BT56 60 aa5.99□□□□□ -1.45
RTN4-206ENST00000394611 CMC4P56277 68 aaPredicted RBP5.99□□□□□ -1.45
RTN4-206ENST00000394611 IL17DQ8TAD2 202 aa5.99□□□□□ -1.45
RTN4-206ENST00000394611 PMAIP1Q13794 54 aa5.99□□□□□ -1.45
RTN4-206ENST00000394611 Q6ZRU5 148 aa5.98□□□□□ -1.45
RTN4-206ENST00000394611 FAM229BQ4G0N7 80 aa5.98□□□□□ -1.45
RTN4-206ENST00000394611 C16orf95Q9H693 158 aa5.98□□□□□ -1.45
RTN4-206ENST00000394611 SEC61GP60059 68 aa5.97□□□□□ -1.45
RTN4-206ENST00000394611 KRTAP10-3P60369 221 aa5.97□□□□□ -1.45
RTN4-206ENST00000394611 ESRGQ1W209 222 aa5.97□□□□□ -1.45
RTN4-206ENST00000394611 MP68P56378 58 aa5.97□□□□□ -1.45
RTN4-206ENST00000394611 PCOTHQ58A44 107 aa5.97□□□□□ -1.45
RTN4-206ENST00000394611 C6orf48Q9UBA6 75 aa5.97□□□□□ -1.45
RTN4-206ENST00000394611 APOC4P55056 127 aa5.96□□□□□ -1.45
RTN4-206ENST00000394611 ST20-AS1Q8NBB2 130 aa5.96□□□□□ -1.45
RTN4-206ENST00000394611 GIG44P09565 113 aaPredicted RBP5.96□□□□□ -1.46
RTN4-206ENST00000394611 PDE6GP18545 87 aa5.96□□□□□ -1.46
RTN4-206ENST00000394611 LYPD5Q6UWN5 251 aa5.96□□□□□ -1.46
RTN4-206ENST00000394611 PKD1L1Q8TDX9 2849 aa5.96□□□□□ -1.46
RTN4-206ENST00000394611 A6NED7 52 aa5.96□□□□□ -1.46
RTN4-206ENST00000394611 KIAA0087Q14695 138 aa5.96□□□□□ -1.46
RTN4-206ENST00000394611 OXLD1Q5BKU9 147 aa5.96□□□□□ -1.46
RTN4-206ENST00000394611 C1orf137Q5JT78 98 aa5.96□□□□□ -1.46
RTN4-206ENST00000394611 RPL37AP61513 92 aaKnown RBP5.95□□□□□ -1.46
RTN4-206ENST00000394611 KPRPQ5T749 579 aaPredicted RBP5.95□□□□□ -1.46
RTN4-206ENST00000394611 PRR15LQ9BU68 103 aa5.94□□□□□ -1.46
RTN4-206ENST00000394611 IGLV1-51P01701 117 aa5.94□□□□□ -1.46
RTN4-206ENST00000394611 SYCNQ0VAF6 134 aa5.94□□□□□ -1.46
RTN4-206ENST00000394611 FP248Q71RG6 208 aaPredicted RBP5.94□□□□□ -1.46
RTN4-206ENST00000394611 MDFIQ99750 246 aa5.94□□□□□ -1.46
RTN4-206ENST00000394611 A0A087WSZ3 146 aa5.93□□□□□ -1.46
RTN4-206ENST00000394611 PRLHP81277 87 aa5.93□□□□□ -1.46
RTN4-206ENST00000394611 PLAC8L1A1L4L8 177 aa5.93□□□□□ -1.46
RTN4-206ENST00000394611 Q6ZTC4 211 aa5.93□□□□□ -1.46
RTN4-206ENST00000394611 STAB2Q8WWQ8 2551 aa5.93□□□□□ -1.46
RTN4-206ENST00000394611 TRRAPQ9Y4A5 3859 aa5.93□□□□□ -1.46
RTN4-206ENST00000394611 A8MUN3 132 aa5.92□□□□□ -1.46
RTN4-206ENST00000394611 FAM168BA1KXE4 195 aa5.92□□□□□ -1.46
RTN4-206ENST00000394611 M0R378 163 aa5.92□□□□□ -1.46
RTN4-206ENST00000394611 NDUFC1O43677 76 aa5.92□□□□□ -1.46
RTN4-206ENST00000394611 COX17Q14061 63 aa5.92□□□□□ -1.46
RTN4-206ENST00000394611 KLK9Q2XQG4 91 aa5.92□□□□□ -1.46
RTN4-206ENST00000394611 IGKV4-1P06312 121 aa5.91□□□□□ -1.46
RTN4-206ENST00000394611 UBE2DNLQ8IWF7 75 aa5.91□□□□□ -1.46
RTN4-206ENST00000394611 MRPL55Q7Z7F7 128 aaKnown RBP5.9□□□□□ -1.46
RTN4-206ENST00000394611 A0A1B0GUV1 79 aa5.9□□□□□ -1.47
RTN4-206ENST00000394611 LELP1Q5T871 98 aa5.9□□□□□ -1.47
RTN4-206ENST00000394611 SPINK6Q6UWN8 80 aa5.9□□□□□ -1.47
RTN4-206ENST00000394611 K7EQZ3 153 aa5.89□□□□□ -1.47
RTN4-206ENST00000394611 CXCL6P80162 114 aa5.89□□□□□ -1.47
RTN4-206ENST00000394611 C9orf66Q5T8R8 295 aa5.89□□□□□ -1.47
RTN4-206ENST00000394611 X6R8D5 127 aa5.88□□□□□ -1.47
RTN4-206ENST00000394611 DEFB131BA0A096LNP1 70 aa5.88□□□□□ -1.47
RTN4-206ENST00000394611 LYRM9A8MSI8 78 aa5.88□□□□□ -1.47
RTN4-206ENST00000394611 UBE2AP49459 152 aa5.88□□□□□ -1.47
RTN4-206ENST00000394611 KLKP1Q107X0 134 aa5.88□□□□□ -1.47
RTN4-206ENST00000394611 OBSCN-AS1Q96MR7 158 aa5.88□□□□□ -1.47
RTN4-206ENST00000394611 CDK2AP2O75956 126 aa5.87□□□□□ -1.47
RTN4-206ENST00000394611 Q6ZRP5 223 aa5.87□□□□□ -1.47
RTN4-206ENST00000394611 C7orf33Q8WU49 177 aa5.87□□□□□ -1.47
RTN4-206ENST00000394611 IGLV9-49A0A0B4J1Y8 123 aa5.87□□□□□ -1.47
RTN4-206ENST00000394611 C1orf64Q8NEQ6 169 aa5.87□□□□□ -1.47
RTN4-206ENST00000394611 RETNLBQ9BQ08 111 aa5.87□□□□□ -1.47
RTN4-206ENST00000394611 ANK2Q01484 3957 aa5.87□□□□□ -1.47
RTN4-206ENST00000394611 LINC01600Q96MT4 127 aa5.87□□□□□ -1.47
RTN4-206ENST00000394611 SERTAD4-AS1Q5TG53 156 aa5.86□□□□□ -1.47
RTN4-206ENST00000394611 DMBT1Q9UGM3 2413 aaPredicted RBP5.85□□□□□ -1.47
RTN4-206ENST00000394611 CSNK1G2-AS1Q8NCQ2 148 aa5.85□□□□□ -1.47
RTN4-206ENST00000394611 DNHD1Q96M86 4753 aa5.85□□□□□ -1.47
RTN4-206ENST00000394611 LOC110117498A0A087WWA1 95 aa5.85□□□□□ -1.47
RTN4-206ENST00000394611 ELOF1P60002 83 aaKnown RBP5.85□□□□□ -1.47
RTN4-206ENST00000394611 CMYA5Q8N3K9 4069 aa5.84□□□□□ -1.47
RTN4-206ENST00000394611 IGLV6-57P01721 117 aa5.84□□□□□ -1.47
RTN4-206ENST00000394611 SPAG11AQ6PDA7 123 aa5.84□□□□□ -1.47
RTN4-206ENST00000394611 C11orf45Q8TAV5 145 aa5.84□□□□□ -1.47
RTN4-206ENST00000394611 ATP5EP56381 51 aaPredicted RBP5.84□□□□□ -1.48
RTN4-206ENST00000394611 TENM3Q9P273 2699 aa5.84□□□□□ -1.48
RTN4-206ENST00000394611 EGFEM1PQ0D2K5 195 aa5.83□□□□□ -1.48
RTN4-206ENST00000394611 TRBV7-4A0A0J9YYF1 115 aa5.82□□□□□ -1.48
RTN4-206ENST00000394611 H0Y9P7 68 aa5.82□□□□□ -1.48
RTN4-206ENST00000394611 VPREB1P12018 145 aa5.82□□□□□ -1.48
RTN4-206ENST00000394611 HCG22E2RYF7 251 aa5.82□□□□□ -1.48
RTN4-206ENST00000394611 A8MU10 97 aa5.81□□□□□ -1.48
RTN4-206ENST00000394611 C19orf73Q9NVV2 129 aa5.81□□□□□ -1.48
RTN4-206ENST00000394611 ERC2-IT1O76042 136 aa5.81□□□□□ -1.48
RTN4-206ENST00000394611 LINC00167Q96N53 147 aa5.81□□□□□ -1.48
RTN4-206ENST00000394611 TRAV22A0A0B4J277 110 aa5.81□□□□□ -1.48
RTN4-206ENST00000394611 WIPF1O43516 503 aa5.8□□□□□ -1.48
RTN4-206ENST00000394611 CASC2Q6XLA1 102 aa5.8□□□□□ -1.48
RTN4-206ENST00000394611 Q8N377 158 aa5.8□□□□□ -1.48
RTN4-206ENST00000394611 SRRM2Q9UQ35 2752 aaKnown RBP5.8□□□□□ -1.48
RTN4-206ENST00000394611 NDUFB1O75438 58 aa5.79□□□□□ -1.48
RTN4-206ENST00000394611 CASC10Q5T4H9 136 aa5.79□□□□□ -1.48
RTN4-206ENST00000394611 B9D2Q9BPU9 175 aa5.79□□□□□ -1.48
RTN4-206ENST00000394611 CHTF8P0CG12 524 aa5.79□□□□□ -1.48
RTN4-206ENST00000394611 LINC00476Q8WZB0 136 aa5.79□□□□□ -1.48
RTN4-206ENST00000394611 LINC00528Q8N1L1 170 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms