RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 BAHCC1Q9P281 2608 aa4.74□□□□□ -1.65
SMAD1-202ENST00000394092 TENM3Q9P273 2699 aa4.73□□□□□ -1.65
SMAD1-202ENST00000394092 Q6ZRP5 223 aa4.73□□□□□ -1.65
SMAD1-202ENST00000394092 UBL5Q9BZL1 73 aa4.73□□□□□ -1.65
SMAD1-202ENST00000394092 PLA2G2DQ9UNK4 145 aa4.73□□□□□ -1.65
SMAD1-202ENST00000394092 FBN1P35555 2871 aaKnown RBP4.73□□□□□ -1.65
SMAD1-202ENST00000394092 PKD1L1Q8TDX9 2849 aa4.72□□□□□ -1.65
SMAD1-202ENST00000394092 USP17L23D6RBM5 183 aa4.72□□□□□ -1.65
SMAD1-202ENST00000394092 ATOX1O00244 68 aa4.72□□□□□ -1.65
SMAD1-202ENST00000394092 PRB2P02812 416 aaPredicted RBP4.72□□□□□ -1.65
SMAD1-202ENST00000394092 Q6ZQT0 140 aa4.72□□□□□ -1.65
SMAD1-202ENST00000394092 KRTAP4-11Q9BYQ6 195 aa4.72□□□□□ -1.65
SMAD1-202ENST00000394092 KCNQ1DNQ9H478 68 aa4.71□□□□□ -1.66
SMAD1-202ENST00000394092 IGLV5-37A0A075B6J1 123 aa4.7□□□□□ -1.66
SMAD1-202ENST00000394092 PRYO14603 147 aa4.7□□□□□ -1.66
SMAD1-202ENST00000394092 HIST1H4AP62805 103 aaKnown RBP4.7□□□□□ -1.66
SMAD1-202ENST00000394092 IGKV3D-7A0A0C4DH55 119 aa4.7□□□□□ -1.66
SMAD1-202ENST00000394092 LOC107984640A0A0U1RRK4 108 aa4.7□□□□□ -1.66
SMAD1-202ENST00000394092 CCDC179H3BU77 68 aa4.7□□□□□ -1.66
SMAD1-202ENST00000394092 NOTCH1P46531 2555 aa4.69□□□□□ -1.66
SMAD1-202ENST00000394092 HUWE1Q7Z6Z7 4374 aaKnown RBP4.69□□□□□ -1.66
SMAD1-202ENST00000394092 TRBV7-4A0A0J9YYF1 115 aa4.69□□□□□ -1.66
SMAD1-202ENST00000394092 UQCRQO14949 82 aa4.69□□□□□ -1.66
SMAD1-202ENST00000394092 C7orf33Q8WU49 177 aa4.69□□□□□ -1.66
SMAD1-202ENST00000394092 DHRS4-AS1Q9P1J3 65 aa4.69□□□□□ -1.66
SMAD1-202ENST00000394092 COL6A5A8TX70 2615 aa4.68□□□□□ -1.66
SMAD1-202ENST00000394092 B5MCH6 92 aa4.68□□□□□ -1.66
SMAD1-202ENST00000394092 SERTAD4-AS1Q5TG53 156 aa4.68□□□□□ -1.66
SMAD1-202ENST00000394092 KRTAP4-5Q9BYR2 181 aa4.68□□□□□ -1.66
SMAD1-202ENST00000394092 ETDCA0A1B0GVM5 59 aa4.67□□□□□ -1.66
SMAD1-202ENST00000394092 TNP2Q05952 138 aa4.67□□□□□ -1.66
SMAD1-202ENST00000394092 UBE2DNLQ8IWF7 75 aa4.67□□□□□ -1.66
SMAD1-202ENST00000394092 C3orf22Q8N5N4 141 aa4.67□□□□□ -1.66
SMAD1-202ENST00000394092 KRTAP17-1Q9BYP8 105 aa4.67□□□□□ -1.66
SMAD1-202ENST00000394092 IGLV1-50A0A075B6I6 118 aa4.67□□□□□ -1.66
SMAD1-202ENST00000394092 COX7CP15954 63 aa4.67□□□□□ -1.66
SMAD1-202ENST00000394092 C14orf177Q52M58 125 aa4.67□□□□□ -1.66
SMAD1-202ENST00000394092 PKIGQ9Y2B9 76 aa4.67□□□□□ -1.66
SMAD1-202ENST00000394092 DNAH1Q9P2D7 4330 aa4.66□□□□□ -1.66
SMAD1-202ENST00000394092 PSCAO43653 123 aa4.66□□□□□ -1.66
SMAD1-202ENST00000394092 CXCL6P80162 114 aa4.66□□□□□ -1.66
SMAD1-202ENST00000394092 CASC10Q5T4H9 136 aa4.66□□□□□ -1.66
SMAD1-202ENST00000394092 C9orf153Q5TBE3 101 aa4.66□□□□□ -1.66
SMAD1-202ENST00000394092 Q6ZRX8 168 aa4.66□□□□□ -1.66
SMAD1-202ENST00000394092 B9D2Q9BPU9 175 aa4.66□□□□□ -1.66
SMAD1-202ENST00000394092 SPRR1AP35321 89 aa4.65□□□□□ -1.66
SMAD1-202ENST00000394092 Q6ZVQ6 151 aa4.65□□□□□ -1.66
SMAD1-202ENST00000394092 MRPL55Q7Z7F7 128 aaKnown RBP4.65□□□□□ -1.66
SMAD1-202ENST00000394092 NBEAL1Q6ZS30 2694 aa4.65□□□□□ -1.67
SMAD1-202ENST00000394092 A0A087WVE0 104 aa4.64□□□□□ -1.67
SMAD1-202ENST00000394092 CNBPP62633 177 aaKnown RBP4.64□□□□□ -1.67
SMAD1-202ENST00000394092 FAM19A5Q7Z5A7 132 aaPredicted RBP4.64□□□□□ -1.67
SMAD1-202ENST00000394092 SERP2Q8N6R1 65 aa4.64□□□□□ -1.67
SMAD1-202ENST00000394092 A0A1B0GW54 56 aa4.64□□□□□ -1.67
SMAD1-202ENST00000394092 BCE1O60756 84 aa4.64□□□□□ -1.67
SMAD1-202ENST00000394092 LINC01547P58512 204 aaPredicted RBP4.64□□□□□ -1.67
SMAD1-202ENST00000394092 MDFIQ99750 246 aa4.64□□□□□ -1.67
SMAD1-202ENST00000394092 APLNQ9ULZ1 77 aa4.64□□□□□ -1.67
SMAD1-202ENST00000394092 FAM168BA1KXE4 195 aa4.63□□□□□ -1.67
SMAD1-202ENST00000394092 NUPR2A6NF83 97 aa4.63□□□□□ -1.67
SMAD1-202ENST00000394092 RPL37AP8A6NKH3 93 aa4.63□□□□□ -1.67
SMAD1-202ENST00000394092 C16orf90A8MZG2 172 aa4.63□□□□□ -1.67
SMAD1-202ENST00000394092 KRTAP4-16G5E9R7 235 aaPredicted RBP4.63□□□□□ -1.67
SMAD1-202ENST00000394092 HAMPP81172 84 aa4.63□□□□□ -1.67
SMAD1-202ENST00000394092 SS18L2Q9UHA2 77 aa4.63□□□□□ -1.67
SMAD1-202ENST00000394092 IGLV5-48A0A075B6I7 105 aa4.62□□□□□ -1.67
SMAD1-202ENST00000394092 M0R2N4 97 aa4.62□□□□□ -1.67
SMAD1-202ENST00000394092 CRYGAP11844 174 aa4.62□□□□□ -1.67
SMAD1-202ENST00000394092 REG3GQ6UW15 175 aa4.62□□□□□ -1.67
SMAD1-202ENST00000394092 SMIM20Q8N5G0 67 aa4.62□□□□□ -1.67
SMAD1-202ENST00000394092 FUSP35637 526 aaKnown RBP eCLIP4.61□□□□□ -1.67
SMAD1-202ENST00000394092 FAM19A1Q7Z5A9 133 aa4.61□□□□□ -1.67
SMAD1-202ENST00000394092 Q8N377 158 aa4.61□□□□□ -1.67
SMAD1-202ENST00000394092 DEFB105AQ8NG35 78 aa4.61□□□□□ -1.67
SMAD1-202ENST00000394092 Q9BRP9 147 aa4.61□□□□□ -1.67
SMAD1-202ENST00000394092 MGAM2Q2M2H8 2515 aa4.61□□□□□ -1.67
SMAD1-202ENST00000394092 UBE2BP63146 152 aa4.61□□□□□ -1.67
SMAD1-202ENST00000394092 LCE4AQ5TA78 99 aa4.61□□□□□ -1.67
SMAD1-202ENST00000394092 KRTAP1-5Q9BYS1 174 aa4.61□□□□□ -1.67
SMAD1-202ENST00000394092 DNAH9Q9NYC9 4486 aa4.6□□□□□ -1.67
SMAD1-202ENST00000394092 KRTAP7-1Q8IUC3 87 aa4.6□□□□□ -1.67
SMAD1-202ENST00000394092 DYNC2H1Q8NCM8 4307 aaKnown RBP4.6□□□□□ -1.67
SMAD1-202ENST00000394092 A0A096LNI7 61 aa4.59□□□□□ -1.67
SMAD1-202ENST00000394092 NREPQ16612 68 aa4.59□□□□□ -1.67
SMAD1-202ENST00000394092 IGKV2-24A0A0C4DH68 120 aa4.58□□□□□ -1.68
SMAD1-202ENST00000394092 NBDYA0A0U1RRE5 68 aa4.58□□□□□ -1.68
SMAD1-202ENST00000394092 F8WEM9 126 aa4.58□□□□□ -1.68
SMAD1-202ENST00000394092 C1orf137Q5JT78 98 aa4.58□□□□□ -1.68
SMAD1-202ENST00000394092 LINC00474Q9P2X8 69 aa4.58□□□□□ -1.68
SMAD1-202ENST00000394092 STAB2Q8WWQ8 2551 aa4.58□□□□□ -1.68
SMAD1-202ENST00000394092 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.57□□□□□ -1.68
SMAD1-202ENST00000394092 TRAV7A0A075B6U4 112 aa4.57□□□□□ -1.68
SMAD1-202ENST00000394092 Q8NBF4 154 aa4.57□□□□□ -1.68
SMAD1-202ENST00000394092 C3orf84H3BNL1 204 aa4.56□□□□□ -1.68
SMAD1-202ENST00000394092 BPY2O14599 106 aa4.56□□□□□ -1.68
SMAD1-202ENST00000394092 TMEM258P61165 79 aa4.56□□□□□ -1.68
SMAD1-202ENST00000394092 C9orf163Q8N9P6 203 aa4.56□□□□□ -1.68
SMAD1-202ENST00000394092 ST20-AS1Q8NBB2 130 aa4.56□□□□□ -1.68
SMAD1-202ENST00000394092 H0Y9J4 135 aa4.55□□□□□ -1.68
SMAD1-202ENST00000394092 SCXQ7RTU7 201 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms