RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 IGKV2D-24A0A075B6R9 120 aa7.26□□□□□ -1.25
BRF1-204ENST00000392557 WFDC10BQ8IUB3 73 aa7.26□□□□□ -1.25
BRF1-204ENST00000392557 TRAV7A0A075B6U4 112 aa7.26□□□□□ -1.25
BRF1-204ENST00000392557 F8WEM9 126 aa7.26□□□□□ -1.25
BRF1-204ENST00000392557 OXTP01178 125 aa7.26□□□□□ -1.25
BRF1-204ENST00000392557 LYPD5Q6UWN5 251 aa7.26□□□□□ -1.25
BRF1-204ENST00000392557 IGLV6-57P01721 117 aa7.25□□□□□ -1.25
BRF1-204ENST00000392557 PDE6GP18545 87 aa7.25□□□□□ -1.25
BRF1-204ENST00000392557 NREPQ16612 68 aa7.24□□□□□ -1.25
BRF1-204ENST00000392557 C11orf45Q8TAV5 145 aa7.24□□□□□ -1.25
BRF1-204ENST00000392557 DEFB131BA0A096LNP1 70 aa7.24□□□□□ -1.25
BRF1-204ENST00000392557 NKAPP1Q8N9T2 125 aa7.24□□□□□ -1.25
BRF1-204ENST00000392557 LOC110117498A0A087WWA1 95 aa7.23□□□□□ -1.25
BRF1-204ENST00000392557 TM2D3Q9BRN9 247 aa7.23□□□□□ -1.25
BRF1-204ENST00000392557 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.23□□□□□ -1.25
BRF1-204ENST00000392557 Q6ZRU5 148 aa7.23□□□□□ -1.25
BRF1-204ENST00000392557 EGFEM1PQ0D2K5 195 aa7.22□□□□□ -1.25
BRF1-204ENST00000392557 MRPL55Q7Z7F7 128 aaKnown RBP7.21□□□□□ -1.26
BRF1-204ENST00000392557 PMAIP1Q13794 54 aa7.2□□□□□ -1.26
BRF1-204ENST00000392557 M0R378 163 aa7.2□□□□□ -1.26
BRF1-204ENST00000392557 BPY2O14599 106 aa7.2□□□□□ -1.26
BRF1-204ENST00000392557 ESRGQ1W209 222 aa7.2□□□□□ -1.26
BRF1-204ENST00000392557 SRRM2Q9UQ35 2752 aaKnown RBP7.19□□□□□ -1.26
BRF1-204ENST00000392557 Q5XG85 94 aa7.19□□□□□ -1.26
BRF1-204ENST00000392557 RPL37AP8A6NKH3 93 aa7.19□□□□□ -1.26
BRF1-204ENST00000392557 NDUFC2-KCTD14E9PQ53 114 aa7.19□□□□□ -1.26
BRF1-204ENST00000392557 H7BZZ5 65 aa7.19□□□□□ -1.26
BRF1-204ENST00000392557 CXCL6P80162 114 aa7.19□□□□□ -1.26
BRF1-204ENST00000392557 MPLKIPQ8TAP9 179 aa7.19□□□□□ -1.26
BRF1-204ENST00000392557 H3BQ85 93 aa7.19□□□□□ -1.26
BRF1-204ENST00000392557 ELOF1P60002 83 aaKnown RBP7.19□□□□□ -1.26
BRF1-204ENST00000392557 PRR34Q9NV39 138 aa7.18□□□□□ -1.26
BRF1-204ENST00000392557 VPREB1P12018 145 aa7.17□□□□□ -1.26
BRF1-204ENST00000392557 COL7A1Q02388 2944 aa7.17□□□□□ -1.26
BRF1-204ENST00000392557 SERP1Q9Y6X1 66 aa7.16□□□□□ -1.26
BRF1-204ENST00000392557 H3BS24 57 aa7.16□□□□□ -1.26
BRF1-204ENST00000392557 CMYA5Q8N3K9 4069 aa7.16□□□□□ -1.26
BRF1-204ENST00000392557 TRBV7-4A0A0J9YYF1 115 aa7.15□□□□□ -1.26
BRF1-204ENST00000392557 SYCNQ0VAF6 134 aa7.15□□□□□ -1.26
BRF1-204ENST00000392557 CD164Q04900 197 aa7.15□□□□□ -1.26
BRF1-204ENST00000392557 Q6ZRP5 223 aa7.15□□□□□ -1.26
BRF1-204ENST00000392557 TMEM254Q8TBM7 123 aa7.15□□□□□ -1.26
BRF1-204ENST00000392557 K7EIL1 84 aa7.15□□□□□ -1.27
BRF1-204ENST00000392557 FUSP35637 526 aaKnown RBP eCLIP7.14□□□□□ -1.272e-6■■■□□ 19.1
BRF1-204ENST00000392557 GVQW2A0A096LPI5 108 aaPredicted RBP7.14□□□□□ -1.27
BRF1-204ENST00000392557 ETDCA0A1B0GVM5 59 aa7.14□□□□□ -1.27
BRF1-204ENST00000392557 FAM30AQ9NZY2 134 aa7.13□□□□□ -1.27
BRF1-204ENST00000392557 KLKP1Q107X0 134 aa7.13□□□□□ -1.27
BRF1-204ENST00000392557 LRCOL1A6NCL2 159 aa7.12□□□□□ -1.27
BRF1-204ENST00000392557 UBE2BP63146 152 aa7.12□□□□□ -1.27
BRF1-204ENST00000392557 LINC00528Q8N1L1 170 aa7.12□□□□□ -1.27
BRF1-204ENST00000392557 LINC00474Q9P2X8 69 aa7.12□□□□□ -1.27
BRF1-204ENST00000392557 TRBV7-6A0A0J9YX20 115 aa7.12□□□□□ -1.27
BRF1-204ENST00000392557 H3BNG1 76 aa7.11□□□□□ -1.27
BRF1-204ENST00000392557 C15orf56Q8N910 161 aa7.11□□□□□ -1.27
BRF1-204ENST00000392557 C7orf33Q8WU49 177 aa7.1□□□□□ -1.27
BRF1-204ENST00000392557 HIGD2AQ9BW72 106 aa7.1□□□□□ -1.27
BRF1-204ENST00000392557 SMIM26A0A096LP01 95 aa7.1□□□□□ -1.27
BRF1-204ENST00000392557 SERTAD4-AS1Q5TG53 156 aa7.1□□□□□ -1.27
BRF1-204ENST00000392557 MDFIQ99750 246 aa7.1□□□□□ -1.27
BRF1-204ENST00000392557 NDUFC1O43677 76 aa7.09□□□□□ -1.27
BRF1-204ENST00000392557 BCE1O60756 84 aa7.09□□□□□ -1.27
BRF1-204ENST00000392557 FAM168BA1KXE4 195 aa7.08□□□□□ -1.28
BRF1-204ENST00000392557 PRR4Q16378 134 aa7.08□□□□□ -1.28
BRF1-204ENST00000392557 ST20-AS1Q8NBB2 130 aa7.08□□□□□ -1.28
BRF1-204ENST00000392557 LINC00588Q9Y4M8 146 aa7.08□□□□□ -1.28
BRF1-204ENST00000392557 PRYO14603 147 aa7.08□□□□□ -1.28
BRF1-204ENST00000392557 LINC01556Q5JQF7 62 aa7.08□□□□□ -1.28
BRF1-204ENST00000392557 C1orf137Q5JT78 98 aa7.08□□□□□ -1.28
BRF1-204ENST00000392557 IGKV4-1P06312 121 aa7.07□□□□□ -1.28
BRF1-204ENST00000392557 SMIM29Q86T20 159 aa7.07□□□□□ -1.28
BRF1-204ENST00000392557 DEFB116Q30KQ4 102 aa7.07□□□□□ -1.28
BRF1-204ENST00000392557 CASC10Q5T4H9 136 aa7.07□□□□□ -1.28
BRF1-204ENST00000392557 Q8N377 158 aa7.07□□□□□ -1.28
BRF1-204ENST00000392557 IGKV2-24A0A0C4DH68 120 aa7.05□□□□□ -1.28
BRF1-204ENST00000392557 A0A0G2JQZ4 141 aa7.05□□□□□ -1.28
BRF1-204ENST00000392557 A0A1W2PNN7 141 aa7.05□□□□□ -1.28
BRF1-204ENST00000392557 TGP01266 2768 aa7.05□□□□□ -1.28
BRF1-204ENST00000392557 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.04□□□□□ -1.28
BRF1-204ENST00000392557 KRTAP26-1Q6PEX3 210 aa7.04□□□□□ -1.28
BRF1-204ENST00000392557 DHRS4-AS1Q9P1J3 65 aa7.03□□□□□ -1.28
BRF1-204ENST00000392557 FP248Q71RG6 208 aaPredicted RBP7.03□□□□□ -1.28
BRF1-204ENST00000392557 UBE2DNLQ8IWF7 75 aa7.03□□□□□ -1.28
BRF1-204ENST00000392557 DNAH3Q8TD57 4116 aa7.02□□□□□ -1.29
BRF1-204ENST00000392557 DNAH10OSP0CZ25 163 aa7.02□□□□□ -1.29
BRF1-204ENST00000392557 KCNQ1DNQ9H478 68 aa7.02□□□□□ -1.29
BRF1-204ENST00000392557 LYSTQ99698 3801 aa7.02□□□□□ -1.29
BRF1-204ENST00000392557 HUWE1Q7Z6Z7 4374 aaKnown RBP7.01□□□□□ -1.29
BRF1-204ENST00000392557 ATP5EP56381 51 aaPredicted RBP7.01□□□□□ -1.29
BRF1-204ENST00000392557 Q6ZRX8 168 aa7.01□□□□□ -1.29
BRF1-204ENST00000392557 WFDC13Q8IUB5 93 aa7.01□□□□□ -1.29
BRF1-204ENST00000392557 A0A096LNI7 61 aa7.01□□□□□ -1.29
BRF1-204ENST00000392557 A0A1W2PNM2 257 aa7□□□□□ -1.29
BRF1-204ENST00000392557 FAM229BQ4G0N7 80 aa7□□□□□ -1.29
BRF1-204ENST00000392557 OCR1Q9BZK8 76 aa7□□□□□ -1.29
BRF1-204ENST00000392557 ERC2-IT1O76042 136 aa6.99□□□□□ -1.29
BRF1-204ENST00000392557 Q9BRP9 147 aa6.99□□□□□ -1.29
BRF1-204ENST00000392557 K7EQZ3 153 aa6.98□□□□□ -1.29
BRF1-204ENST00000392557 PSCAO43653 123 aa6.98□□□□□ -1.29
BRF1-204ENST00000392557 EPM2AB3EWF7 344 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms