RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 HERVK_113P61574 105 aa9.34□□□□□ -0.91
PTPRK-208ENST00000392449 S100A12P80511 92 aa9.34□□□□□ -0.91
PTPRK-208ENST00000392449 MIEN1Q9BRT3 115 aa9.34□□□□□ -0.91
PTPRK-208ENST00000392449 SPINK1P00995 79 aa9.33□□□□□ -0.92
PTPRK-208ENST00000392449 ADAMTSL4-AS1Q5T5F5 129 aa9.33□□□□□ -0.92
PTPRK-208ENST00000392449 SLC7A5P1Q8MH63 180 aa9.33□□□□□ -0.92
PTPRK-208ENST00000392449 IGLV6-57P01721 117 aa9.32□□□□□ -0.92
PTPRK-208ENST00000392449 NMUP48645 174 aa9.32□□□□□ -0.92
PTPRK-208ENST00000392449 S100A7L2Q5SY68 101 aa9.32□□□□□ -0.92
PTPRK-208ENST00000392449 COLCA2A8K830 154 aa9.31□□□□□ -0.92
PTPRK-208ENST00000392449 TRAV23DV6A0A075B6W5 121 aa9.3□□□□□ -0.92
PTPRK-208ENST00000392449 A0A0J9YXY3 114 aa9.3□□□□□ -0.92
PTPRK-208ENST00000392449 NDUFC2O95298 119 aa9.29□□□□□ -0.92
PTPRK-208ENST00000392449 Q8N377 158 aa9.29□□□□□ -0.92
PTPRK-208ENST00000392449 ST20-AS1Q8NBB2 130 aa9.29□□□□□ -0.92
PTPRK-208ENST00000392449 KRTAP4-1Q9BYQ7 146 aa9.28□□□□□ -0.92
PTPRK-208ENST00000392449 E9PLD3 99 aa9.27□□□□□ -0.93
PTPRK-208ENST00000392449 ZNF73O43830 326 aaPredicted RBP9.27□□□□□ -0.93
PTPRK-208ENST00000392449 SSBP3-AS1Q7Z2R9 100 aa9.27□□□□□ -0.93
PTPRK-208ENST00000392449 C9orf153Q5TBE3 101 aa9.26□□□□□ -0.93
PTPRK-208ENST00000392449 KRTAP4-8Q9BYQ9 185 aa9.26□□□□□ -0.93
PTPRK-208ENST00000392449 ASB16-AS1Q495Z4 193 aa9.25□□□□□ -0.93
PTPRK-208ENST00000392449 LITAFQ99732 161 aa9.24□□□□□ -0.93
PTPRK-208ENST00000392449 JOSD1Q15040 202 aaPredicted RBP9.23□□□□□ -0.93
PTPRK-208ENST00000392449 SYS1-DBNDD2H3BUS1 97 aa9.22□□□□□ -0.93
PTPRK-208ENST00000392449 RPS29P62273 56 aaKnown RBP9.22□□□□□ -0.93
PTPRK-208ENST00000392449 LINC00308Q8TCZ7 52 aa9.21□□□□□ -0.93
PTPRK-208ENST00000392449 TTTY13Q9BZ97 58 aa9.21□□□□□ -0.93
PTPRK-208ENST00000392449 SLC25A20O43772 301 aa9.21□□□□□ -0.94
PTPRK-208ENST00000392449 HIST1H2BKO60814 126 aa9.2□□□□□ -0.94
PTPRK-208ENST00000392449 HIST1H2BJP06899 126 aa9.2□□□□□ -0.94
PTPRK-208ENST00000392449 HIST1H2BOP23527 126 aa9.2□□□□□ -0.94
PTPRK-208ENST00000392449 HIST1H2BBP33778 126 aa9.2□□□□□ -0.94
PTPRK-208ENST00000392449 HIST1H2BDP58876 126 aa9.2□□□□□ -0.94
PTPRK-208ENST00000392449 HIST1H2BCP62807 126 aa9.2□□□□□ -0.94
PTPRK-208ENST00000392449 HIST2H2BEQ16778 126 aa9.2□□□□□ -0.94
PTPRK-208ENST00000392449 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.2□□□□□ -0.94
PTPRK-208ENST00000392449 OR13C6PQ8NH95 151 aa9.2□□□□□ -0.94
PTPRK-208ENST00000392449 HIST1H2BHQ93079 126 aa9.2□□□□□ -0.94
PTPRK-208ENST00000392449 HIST1H2BNQ99877 126 aa9.2□□□□□ -0.94
PTPRK-208ENST00000392449 HIST1H2BMQ99879 126 aa9.2□□□□□ -0.94
PTPRK-208ENST00000392449 SPANXCQ9NY87 97 aa9.19□□□□□ -0.94
PTPRK-208ENST00000392449 LINC01545Q5VT33 79 aa9.18□□□□□ -0.94
PTPRK-208ENST00000392449 ZNF815PA8K554 130 aa9.17□□□□□ -0.94
PTPRK-208ENST00000392449 SEC61BP60468 96 aaKnown RBP9.17□□□□□ -0.94
PTPRK-208ENST00000392449 HRCT1Q6UXD1 115 aa9.17□□□□□ -0.94
PTPRK-208ENST00000392449 TIMM17BO60830 172 aa9.15□□□□□ -0.94
PTPRK-208ENST00000392449 HINT1P49773 126 aaPredicted RBP9.15□□□□□ -0.94
PTPRK-208ENST00000392449 SPRR1BP22528 89 aa9.14□□□□□ -0.95
PTPRK-208ENST00000392449 C3orf79P0CE67 100 aa9.13□□□□□ -0.95
PTPRK-208ENST00000392449 PET117Q6UWS5 81 aa9.13□□□□□ -0.95
PTPRK-208ENST00000392449 SPANXDQ9BXN6 97 aa9.13□□□□□ -0.95
PTPRK-208ENST00000392449 C6orf99Q4VX62 202 aa9.12□□□□□ -0.95
PTPRK-208ENST00000392449 DHRS4-AS1Q9P1J3 65 aa9.12□□□□□ -0.95
PTPRK-208ENST00000392449 C5orf52A6NGY3 159 aa9.11□□□□□ -0.95
PTPRK-208ENST00000392449 CBY1Q9Y3M2 126 aa9.11□□□□□ -0.95
PTPRK-208ENST00000392449 COX7BP24311 80 aa9.1□□□□□ -0.95
PTPRK-208ENST00000392449 LINC01547P58512 204 aaPredicted RBP9.1□□□□□ -0.95
PTPRK-208ENST00000392449 ELOF1P60002 83 aaKnown RBP9.1□□□□□ -0.95
PTPRK-208ENST00000392449 Q1RN00 199 aa9.1□□□□□ -0.95
PTPRK-208ENST00000392449 DEFB105AQ8NG35 78 aa9.1□□□□□ -0.95
PTPRK-208ENST00000392449 KRTDAPP60985 99 aa9.09□□□□□ -0.95
PTPRK-208ENST00000392449 KRTAP9-6A0A140TA67 174 aa9.08□□□□□ -0.96
PTPRK-208ENST00000392449 C9orf92A6NGG3 77 aa9.08□□□□□ -0.96
PTPRK-208ENST00000392449 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.08□□□□□ -0.96
PTPRK-208ENST00000392449 LAMTOR3Q9UHA4 124 aa9.08□□□□□ -0.96
PTPRK-208ENST00000392449 ANKRD39Q53RE8 183 aa9.07□□□□□ -0.96
PTPRK-208ENST00000392449 SLC25A34Q6PIV7 304 aa9.07□□□□□ -0.96
PTPRK-208ENST00000392449 H7C2G1 150 aa9.06□□□□□ -0.96
PTPRK-208ENST00000392449 TAL2Q16559 108 aa9.06□□□□□ -0.96
PTPRK-208ENST00000392449 SCGB1D4Q6XE38 83 aa9.06□□□□□ -0.96
PTPRK-208ENST00000392449 LINC00518Q8N0U6 118 aa9.06□□□□□ -0.96
PTPRK-208ENST00000392449 ATOH7Q8N100 152 aa9.06□□□□□ -0.96
PTPRK-208ENST00000392449 LIMD2Q9BT23 127 aa9.06□□□□□ -0.96
PTPRK-208ENST00000392449 A0A0G2JQZ4 141 aa9.05□□□□□ -0.96
PTPRK-208ENST00000392449 S100A1P23297 94 aa9.04□□□□□ -0.96
PTPRK-208ENST00000392449 PCOTHQ58A44 107 aa9.03□□□□□ -0.96
PTPRK-208ENST00000392449 COA6Q5JTJ3 125 aaKnown RBP9.02□□□□□ -0.96
PTPRK-208ENST00000392449 SMIM29Q86T20 159 aa9.02□□□□□ -0.96
PTPRK-208ENST00000392449 TEX49A0A1B0GTD5 131 aa9.02□□□□□ -0.97
PTPRK-208ENST00000392449 A6NDN8 102 aa9.02□□□□□ -0.97
PTPRK-208ENST00000392449 PCP2Q8IVA1 136 aa9.02□□□□□ -0.97
PTPRK-208ENST00000392449 KRTAP19-2Q3LHN2 52 aa9.01□□□□□ -0.97
PTPRK-208ENST00000392449 MUSTN1Q8IVN3 82 aa9.01□□□□□ -0.97
PTPRK-208ENST00000392449 PRO1933Q9H354 126 aa9□□□□□ -0.97
PTPRK-208ENST00000392449 TRBV7-6A0A0J9YX20 115 aa8.99□□□□□ -0.97
PTPRK-208ENST00000392449 IGLV8-61A0A075B6I0 122 aa8.98□□□□□ -0.97
PTPRK-208ENST00000392449 A0A1B0GWB2 263 aa8.98□□□□□ -0.97
PTPRK-208ENST00000392449 C20orf202A1L168 122 aa8.97□□□□□ -0.97
PTPRK-208ENST00000392449 IFITM1P13164 125 aa8.97□□□□□ -0.97
PTPRK-208ENST00000392449 CD164Q04900 197 aa8.97□□□□□ -0.97
PTPRK-208ENST00000392449 IGLV5-48A0A075B6I7 105 aa8.96□□□□□ -0.97
PTPRK-208ENST00000392449 AKR1D1P51857 326 aa8.96□□□□□ -0.98
PTPRK-208ENST00000392449 C1orf195Q5TG92 126 aa8.95□□□□□ -0.98
PTPRK-208ENST00000392449 SMIM11BQ8TCY0 68 aa8.95□□□□□ -0.98
PTPRK-208ENST00000392449 COPS9Q8WXC6 57 aa8.95□□□□□ -0.98
PTPRK-208ENST00000392449 KRTAP4-12Q9BQ66 201 aa8.94□□□□□ -0.98
PTPRK-208ENST00000392449 Q6ZVH6 145 aa8.93□□□□□ -0.98
PTPRK-208ENST00000392449 MT1HP80294 61 aa8.92□□□□□ -0.98
PTPRK-208ENST00000392449 Q5XG85 94 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms