RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 PHF5AQ7RTV0 110 aaKnown RBP11□□□□□ -0.65
SNX9-201ENST00000392185 MXRA5Q9NR99 2828 aa11□□□□□ -0.65
SNX9-201ENST00000392185 FAM168BA1KXE4 195 aa11□□□□□ -0.65
SNX9-201ENST00000392185 DEFB116Q30KQ4 102 aa10.99□□□□□ -0.65
SNX9-201ENST00000392185 FAM19A3Q7Z5A8 133 aa10.99□□□□□ -0.65
SNX9-201ENST00000392185 A0A087WSZ3 146 aa10.99□□□□□ -0.65
SNX9-201ENST00000392185 ZFHX4Q86UP3 3567 aa10.99□□□□□ -0.65
SNX9-201ENST00000392185 CIRBP-AS1Q8TBR5 109 aa10.98□□□□□ -0.65
SNX9-201ENST00000392185 IGKV4-1P06312 121 aa10.97□□□□□ -0.65
SNX9-201ENST00000392185 C15orf56Q8N910 161 aa10.97□□□□□ -0.65
SNX9-201ENST00000392185 VPREB1P12018 145 aa10.96□□□□□ -0.65
SNX9-201ENST00000392185 CASC10Q5T4H9 136 aa10.96□□□□□ -0.65
SNX9-201ENST00000392185 Q6JHZ5 121 aa10.96□□□□□ -0.65
SNX9-201ENST00000392185 SMIM20Q8N5G0 67 aa10.96□□□□□ -0.65
SNX9-201ENST00000392185 IMUPQ9GZP8 106 aa10.96□□□□□ -0.65
SNX9-201ENST00000392185 SERTAD4-AS1Q5TG53 156 aa10.95□□□□□ -0.66
SNX9-201ENST00000392185 WWC2-AS2Q96NR7 200 aa10.95□□□□□ -0.66
SNX9-201ENST00000392185 CDIP1Q9H305 208 aa10.94□□□□□ -0.66
SNX9-201ENST00000392185 UQCRQO14949 82 aa10.94□□□□□ -0.66
SNX9-201ENST00000392185 FAM104AQ969W3 186 aa10.93□□□□□ -0.66
SNX9-201ENST00000392185 Q6ZVQ6 151 aa10.92□□□□□ -0.66
SNX9-201ENST00000392185 RTL8CO15255 209 aa10.92□□□□□ -0.66
SNX9-201ENST00000392185 ST20-AS1Q8NBB2 130 aa10.92□□□□□ -0.66
SNX9-201ENST00000392185 SNURFQ9Y675 71 aa10.92□□□□□ -0.66
SNX9-201ENST00000392185 ELOF1P60002 83 aaKnown RBP10.91□□□□□ -0.66
SNX9-201ENST00000392185 C16orf90A8MZG2 172 aa10.91□□□□□ -0.66
SNX9-201ENST00000392185 WIPF1O43516 503 aa10.91□□□□□ -0.66
SNX9-201ENST00000392185 Q8N9L7 120 aa10.9□□□□□ -0.66
SNX9-201ENST00000392185 CCDC179H3BU77 68 aa10.89□□□□□ -0.67
SNX9-201ENST00000392185 SERP2Q8N6R1 65 aa10.89□□□□□ -0.67
SNX9-201ENST00000392185 Q6ZRX8 168 aa10.88□□□□□ -0.67
SNX9-201ENST00000392185 IGLV6-57P01721 117 aa10.87□□□□□ -0.67
SNX9-201ENST00000392185 FAM30AQ9NZY2 134 aa10.86□□□□□ -0.67
SNX9-201ENST00000392185 PRR4Q16378 134 aa10.86□□□□□ -0.67
SNX9-201ENST00000392185 EPM2AB3EWF7 344 aa10.84□□□□□ -0.67
SNX9-201ENST00000392185 C9orf129Q5T035 196 aaKnown RBP10.83□□□□□ -0.68
SNX9-201ENST00000392185 APLNQ9ULZ1 77 aa10.83□□□□□ -0.68
SNX9-201ENST00000392185 LINC01547P58512 204 aaPredicted RBP10.83□□□□□ -0.68
SNX9-201ENST00000392185 Q6Q795 121 aa10.82□□□□□ -0.68
SNX9-201ENST00000392185 COX7CP15954 63 aa10.82□□□□□ -0.68
SNX9-201ENST00000392185 IGHV6-1A0A0B4J1U7 121 aa10.8□□□□□ -0.68
SNX9-201ENST00000392185 MOBPQ13875 183 aa10.8□□□□□ -0.68
SNX9-201ENST00000392185 TRBV7-6A0A0J9YX20 115 aa10.8□□□□□ -0.68
SNX9-201ENST00000392185 TMEM258P61165 79 aa10.79□□□□□ -0.68
SNX9-201ENST00000392185 CHKB-CPT1BH3BT56 60 aa10.78□□□□□ -0.68
SNX9-201ENST00000392185 LINC00476Q8WZB0 136 aa10.77□□□□□ -0.69
SNX9-201ENST00000392185 IGLV1-50A0A075B6I6 118 aa10.77□□□□□ -0.69
SNX9-201ENST00000392185 LINC00528Q8N1L1 170 aa10.76□□□□□ -0.69
SNX9-201ENST00000392185 A0A087WTM6 91 aa10.76□□□□□ -0.69
SNX9-201ENST00000392185 Q6ZQT0 140 aa10.76□□□□□ -0.69
SNX9-201ENST00000392185 KCNQ1DNQ9H478 68 aa10.76□□□□□ -0.69
SNX9-201ENST00000392185 C9orf163Q8N9P6 203 aa10.75□□□□□ -0.69
SNX9-201ENST00000392185 SMG1Q96Q15 3661 aaKnown RBP10.75□□□□□ -0.69
SNX9-201ENST00000392185 C5orf47Q569G3 176 aa10.74□□□□□ -0.69
SNX9-201ENST00000392185 FAM236DA0A1B0GTK5 79 aa10.73□□□□□ -0.69
SNX9-201ENST00000392185 FAM236CP0DP71 79 aa10.73□□□□□ -0.69
SNX9-201ENST00000392185 J3KT08 172 aa10.73□□□□□ -0.69
SNX9-201ENST00000392185 LINC00208Q96KT6 92 aa10.73□□□□□ -0.69
SNX9-201ENST00000392185 A0A1W2PNN7 141 aa10.72□□□□□ -0.69
SNX9-201ENST00000392185 CASC2Q6XLA1 102 aa10.72□□□□□ -0.69
SNX9-201ENST00000392185 Q8NBF4 154 aa10.72□□□□□ -0.69
SNX9-201ENST00000392185 TRAV7A0A075B6U4 112 aa10.71□□□□□ -0.69
SNX9-201ENST00000392185 BCE1O60756 84 aa10.71□□□□□ -0.69
SNX9-201ENST00000392185 A0A0G2JQZ4 141 aa10.7□□□□□ -0.7
SNX9-201ENST00000392185 TRBV7-7A0A0K0K1E9 115 aa10.69□□□□□ -0.7
SNX9-201ENST00000392185 RETNLBQ9BQ08 111 aa10.69□□□□□ -0.7
SNX9-201ENST00000392185 CELSR1Q9NYQ6 3014 aa10.67□□□□□ -0.7
SNX9-201ENST00000392185 SPACA4Q8TDM5 124 aa10.67□□□□□ -0.7
SNX9-201ENST00000392185 TLX1NBP0CAT3 122 aa10.66□□□□□ -0.7
SNX9-201ENST00000392185 LOC110117498A0A087WWA1 95 aa10.65□□□□□ -0.7
SNX9-201ENST00000392185 ERC2-IT1O76042 136 aa10.64□□□□□ -0.71
SNX9-201ENST00000392185 CXCL6P80162 114 aa10.64□□□□□ -0.71
SNX9-201ENST00000392185 Q8N377 158 aa10.64□□□□□ -0.71
SNX9-201ENST00000392185 MPLKIPQ8TAP9 179 aa10.64□□□□□ -0.71
SNX9-201ENST00000392185 HCG22E2RYF7 251 aa10.62□□□□□ -0.71
SNX9-201ENST00000392185 ANAPC11Q9NYG5 84 aa10.62□□□□□ -0.71
SNX9-201ENST00000392185 SMIM29Q86T20 159 aa10.61□□□□□ -0.71
SNX9-201ENST00000392185 RPL37AP61513 92 aaKnown RBP10.61□□□□□ -0.71
SNX9-201ENST00000392185 CNBPP62633 177 aaKnown RBP10.6□□□□□ -0.71
SNX9-201ENST00000392185 PCOTHQ58A44 107 aa10.6□□□□□ -0.71
SNX9-201ENST00000392185 SMR3BP02814 79 aaPredicted RBP10.59□□□□□ -0.71
SNX9-201ENST00000392185 TNP2Q05952 138 aa10.59□□□□□ -0.71
SNX9-201ENST00000392185 Q8NDZ9 215 aa10.59□□□□□ -0.71
SNX9-201ENST00000392185 CRYGAP11844 174 aa10.59□□□□□ -0.71
SNX9-201ENST00000392185 NDUFC1O43677 76 aa10.59□□□□□ -0.71
SNX9-201ENST00000392185 TENM1Q9UKZ4 2725 aa10.58□□□□□ -0.72
SNX9-201ENST00000392185 TMEM254Q8TBM7 123 aa10.58□□□□□ -0.72
SNX9-201ENST00000392185 KRTAP1-5Q9BYS1 174 aa10.57□□□□□ -0.72
SNX9-201ENST00000392185 OTOGQ6ZRI0 2925 aa10.57□□□□□ -0.72
SNX9-201ENST00000392185 PLA2G2DQ9UNK4 145 aa10.56□□□□□ -0.72
SNX9-201ENST00000392185 PSORS1C2Q9UIG4 136 aa10.55□□□□□ -0.72
SNX9-201ENST00000392185 IGFL1Q6UW32 110 aa10.55□□□□□ -0.72
SNX9-201ENST00000392185 H0Y9P7 68 aa10.54□□□□□ -0.72
SNX9-201ENST00000392185 TYMSOSQ8TAI1 123 aa10.54□□□□□ -0.72
SNX9-201ENST00000392185 ZNF861PO60384 105 aa10.52□□□□□ -0.72
SNX9-201ENST00000392185 PLA2G1BP04054 148 aaKnown RBP10.52□□□□□ -0.72
SNX9-201ENST00000392185 TRBV7-4A0A0J9YYF1 115 aa10.52□□□□□ -0.73
SNX9-201ENST00000392185 LIMD2Q9BT23 127 aa10.51□□□□□ -0.73
SNX9-201ENST00000392185 FBN1P35555 2871 aaKnown RBP10.51□□□□□ -0.73
SNX9-201ENST00000392185 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms