RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 ANKRD26Q9UPS8 1709 aa-0.72□□□□□ -2.53
RNU6-440P-201ENST00000390882 NF1P21359 2839 aa-0.73□□□□□ -2.53
RNU6-440P-201ENST00000390882 HERC2O95714 4834 aa-0.73□□□□□ -2.53
RNU6-440P-201ENST00000390882 S100PP25815 95 aa-0.73□□□□□ -2.53
RNU6-440P-201ENST00000390882 FAUP35544 74 aaKnown RBP-0.73□□□□□ -2.53
RNU6-440P-201ENST00000390882 C14orf144Q96I85 54 aa-0.73□□□□□ -2.53
RNU6-440P-201ENST00000390882 POLR1AO95602 1720 aaPredicted RBP-0.73□□□□□ -2.53
RNU6-440P-201ENST00000390882 UBR4Q5T4S7 5183 aa-0.73□□□□□ -2.53
RNU6-440P-201ENST00000390882 RGPD3A6NKT7 1758 aaPredicted RBP-0.73□□□□□ -2.53
RNU6-440P-201ENST00000390882 RGPD4Q7Z3J3 1758 aa-0.73□□□□□ -2.53
RNU6-440P-201ENST00000390882 ANKRD50Q9ULJ7 1429 aa-0.73□□□□□ -2.53
RNU6-440P-201ENST00000390882 ATP10BO94823 1461 aa-0.73□□□□□ -2.53
RNU6-440P-201ENST00000390882 ATP7BP35670 1465 aa-0.73□□□□□ -2.53
RNU6-440P-201ENST00000390882 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.73□□□□□ -2.53
RNU6-440P-201ENST00000390882 PLXNC1O60486 1568 aa-0.74□□□□□ -2.53
RNU6-440P-201ENST00000390882 NESP48681 1621 aa-0.74□□□□□ -2.53
RNU6-440P-201ENST00000390882 UBR1Q8IWV7 1749 aa-0.74□□□□□ -2.53
RNU6-440P-201ENST00000390882 USH2AO75445 5202 aa-0.74□□□□□ -2.53
RNU6-440P-201ENST00000390882 C9orf92A6NGG3 77 aa-0.74□□□□□ -2.53
RNU6-440P-201ENST00000390882 NDUFA3O95167 84 aa-0.74□□□□□ -2.53
RNU6-440P-201ENST00000390882 DPY30Q9C005 99 aa-0.74□□□□□ -2.53
RNU6-440P-201ENST00000390882 PKHD1L1Q86WI1 4243 aa-0.74□□□□□ -2.53
RNU6-440P-201ENST00000390882 TGP01266 2768 aa-0.74□□□□□ -2.53
RNU6-440P-201ENST00000390882 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-440P-201ENST00000390882 SPG11Q96JI7 2443 aa-0.75□□□□□ -2.53
RNU6-440P-201ENST00000390882 A0A1B0GUT8 65 aa-0.75□□□□□ -2.53
RNU6-440P-201ENST00000390882 FAT3Q8TDW7 4589 aa-0.75□□□□□ -2.53
RNU6-440P-201ENST00000390882 USP32Q8NFA0 1604 aa-0.75□□□□□ -2.53
RNU6-440P-201ENST00000390882 LTN1O94822 1766 aa-0.75□□□□□ -2.53
RNU6-440P-201ENST00000390882 SCN11AQ9UI33 1791 aa-0.75□□□□□ -2.53
RNU6-440P-201ENST00000390882 STARD9Q9P2P6 4700 aa-0.76□□□□□ -2.53
RNU6-440P-201ENST00000390882 PLGLAQ15195 96 aa-0.76□□□□□ -2.53
RNU6-440P-201ENST00000390882 GAFA1Q96PS6 74 aa-0.76□□□□□ -2.53
RNU6-440P-201ENST00000390882 NWD1Q149M9 1564 aa-0.76□□□□□ -2.53
RNU6-440P-201ENST00000390882 AKAP12Q02952 1782 aa-0.76□□□□□ -2.53
RNU6-440P-201ENST00000390882 EPG5Q9HCE0 2579 aa-0.76□□□□□ -2.53
RNU6-440P-201ENST00000390882 IQCF6A8MYZ5 107 aa-0.77□□□□□ -2.53
RNU6-440P-201ENST00000390882 HMGN2P05204 90 aaKnown RBP-0.77□□□□□ -2.53
RNU6-440P-201ENST00000390882 RBP2P50120 134 aa-0.77□□□□□ -2.53
RNU6-440P-201ENST00000390882 ACBD7Q8N6N7 88 aa-0.77□□□□□ -2.53
RNU6-440P-201ENST00000390882 TEP1Q99973 2627 aaKnown RBP-0.77□□□□□ -2.53
RNU6-440P-201ENST00000390882 MAP3K1Q13233 1512 aa-0.78□□□□□ -2.53
RNU6-440P-201ENST00000390882 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.78□□□□□ -2.53
RNU6-440P-201ENST00000390882 CEP162Q5TB80 1403 aa-0.78□□□□□ -2.53
RNU6-440P-201ENST00000390882 PDE4DIPQ5VU43 2346 aa-0.78□□□□□ -2.53
RNU6-440P-201ENST00000390882 ATP6V1G2-DDX39BF2Z307 99 aa-0.78□□□□□ -2.53
RNU6-440P-201ENST00000390882 CYB5AP00167 134 aa-0.78□□□□□ -2.53
RNU6-440P-201ENST00000390882 SMIM11AP58511 58 aa-0.78□□□□□ -2.53
RNU6-440P-201ENST00000390882 MUC17Q685J3 4493 aa-0.78□□□□□ -2.53
RNU6-440P-201ENST00000390882 DNAH3Q8TD57 4116 aa-0.79□□□□□ -2.54
RNU6-440P-201ENST00000390882 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.79□□□□□ -2.54
RNU6-440P-201ENST00000390882 PEA15Q15121 130 aa-0.79□□□□□ -2.54
RNU6-440P-201ENST00000390882 PRO3102Q9H379 93 aa-0.79□□□□□ -2.54
RNU6-440P-201ENST00000390882 DOT1LQ8TEK3 1739 aa-0.79□□□□□ -2.54
RNU6-440P-201ENST00000390882 CUBNO60494 3623 aa-0.79□□□□□ -2.54
RNU6-440P-201ENST00000390882 WIZO95785 1651 aa-0.79□□□□□ -2.54
RNU6-440P-201ENST00000390882 TMEM131LA2VDJ0 1609 aa-0.79□□□□□ -2.54
RNU6-440P-201ENST00000390882 DEPDC5O75140 1603 aa-0.79□□□□□ -2.54
RNU6-440P-201ENST00000390882 REV3LO60673 3130 aa-0.8□□□□□ -2.54
RNU6-440P-201ENST00000390882 ANK3Q12955 4377 aaKnown RBP-0.8□□□□□ -2.54
RNU6-440P-201ENST00000390882 LYSTQ99698 3801 aa-0.8□□□□□ -2.54
RNU6-440P-201ENST00000390882 NBPF19A0A087WUL8 3843 aa-0.8□□□□□ -2.54
RNU6-440P-201ENST00000390882 GYPAP02724 150 aa-0.8□□□□□ -2.54
RNU6-440P-201ENST00000390882 C3orf79P0CE67 100 aa-0.8□□□□□ -2.54
RNU6-440P-201ENST00000390882 NCMAPQ5T1S8 102 aa-0.8□□□□□ -2.54
RNU6-440P-201ENST00000390882 NEXMIFQ5QGS0 1516 aa-0.8□□□□□ -2.54
RNU6-440P-201ENST00000390882 DNAH9Q9NYC9 4486 aa-0.8□□□□□ -2.54
RNU6-440P-201ENST00000390882 AKAP13Q12802 2813 aa-0.81□□□□□ -2.54
RNU6-440P-201ENST00000390882 TNRC18O15417 2968 aaPredicted RBP-0.81□□□□□ -2.54
RNU6-440P-201ENST00000390882 WFDC9Q8NEX5 89 aa-0.81□□□□□ -2.54
RNU6-440P-201ENST00000390882 MAGI3Q5TCQ9 1506 aa-0.81□□□□□ -2.54
RNU6-440P-201ENST00000390882 ABCC10Q5T3U5 1492 aa-0.81□□□□□ -2.54
RNU6-440P-201ENST00000390882 TRAV21A0A0B4J279 112 aa-0.82□□□□□ -2.54
RNU6-440P-201ENST00000390882 M0R143 59 aa-0.82□□□□□ -2.54
RNU6-440P-201ENST00000390882 LINC00158P58513 81 aa-0.82□□□□□ -2.54
RNU6-440P-201ENST00000390882 VPS8Q8N3P4 1428 aa-0.82□□□□□ -2.54
RNU6-440P-201ENST00000390882 PLIN4Q96Q06 1357 aa-0.83□□□□□ -2.54
RNU6-440P-201ENST00000390882 VPS13BQ7Z7G8 4022 aa-0.83□□□□□ -2.54
RNU6-440P-201ENST00000390882 HIVEP1P15822 2718 aa-0.83□□□□□ -2.54
RNU6-440P-201ENST00000390882 ZNF831Q5JPB2 1677 aa-0.83□□□□□ -2.54
RNU6-440P-201ENST00000390882 C20orf78Q9BR46 151 aa-0.83□□□□□ -2.54
RNU6-440P-201ENST00000390882 AKAP9Q99996 3911 aa-0.83□□□□□ -2.54
RNU6-440P-201ENST00000390882 DDX60LQ5H9U9 1706 aaKnown RBP-0.84□□□□□ -2.54
RNU6-440P-201ENST00000390882 VPS13DQ5THJ4 4388 aa-0.84□□□□□ -2.54
RNU6-440P-201ENST00000390882 MYMXA0A1B0GTQ4 84 aa-0.84□□□□□ -2.54
RNU6-440P-201ENST00000390882 PRLHP81277 87 aa-0.84□□□□□ -2.54
RNU6-440P-201ENST00000390882 S4R3F8 94 aa-0.84□□□□□ -2.54
RNU6-440P-201ENST00000390882 URB2Q14146 1524 aaKnown RBP-0.84□□□□□ -2.54
RNU6-440P-201ENST00000390882 HECTD1Q9ULT8 2610 aa-0.85□□□□□ -2.54
RNU6-440P-201ENST00000390882 MAP3K4Q9Y6R4 1608 aa-0.85□□□□□ -2.55
RNU6-440P-201ENST00000390882 ARFGEF2Q9Y6D5 1785 aa-0.85□□□□□ -2.55
RNU6-440P-201ENST00000390882 HTTP42858 3142 aa-0.85□□□□□ -2.55
RNU6-440P-201ENST00000390882 LCE6AA0A183 80 aa-0.85□□□□□ -2.55
RNU6-440P-201ENST00000390882 NDUFB1O75438 58 aa-0.85□□□□□ -2.55
RNU6-440P-201ENST00000390882 DIP2BQ9P265 1576 aa-0.85□□□□□ -2.55
RNU6-440P-201ENST00000390882 TRANK1O15050 2925 aa-0.85□□□□□ -2.55
RNU6-440P-201ENST00000390882 CCDC88BA6NC98 1476 aa-0.86□□□□□ -2.55
RNU6-440P-201ENST00000390882 NCOA2Q15596 1464 aa-0.86□□□□□ -2.55
RNU6-440P-201ENST00000390882 FASNP49327 2511 aaKnown RBP-0.86□□□□□ -2.55
RNU6-440P-201ENST00000390882 TACC2O95359 2948 aa-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms