RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 SEC61BP60468 96 aaKnown RBP9.67□□□□□ -0.86
HMGN1-204ENST00000380749 NPC2P61916 151 aa9.67□□□□□ -0.86
HMGN1-204ENST00000380749 CBY1Q9Y3M2 126 aa9.67□□□□□ -0.86
HMGN1-204ENST00000380749 ZNF73O43830 326 aaPredicted RBP9.66□□□□□ -0.86
HMGN1-204ENST00000380749 LCE2DQ5TA82 110 aaPredicted RBP9.65□□□□□ -0.86
HMGN1-204ENST00000380749 A0A0J9YXY3 114 aa9.64□□□□□ -0.87
HMGN1-204ENST00000380749 SOSTDC1Q6X4U4 206 aa9.64□□□□□ -0.87
HMGN1-204ENST00000380749 E9PLD3 99 aa9.63□□□□□ -0.87
HMGN1-204ENST00000380749 HINT1P49773 126 aaPredicted RBP9.63□□□□□ -0.87
HMGN1-204ENST00000380749 C5orf52A6NGY3 159 aa9.62□□□□□ -0.87
HMGN1-204ENST00000380749 ADAMTSL4-AS1Q5T5F5 129 aa9.62□□□□□ -0.87
HMGN1-204ENST00000380749 EIF4EBP3O60516 100 aaPredicted RBP9.61□□□□□ -0.87
HMGN1-204ENST00000380749 LINC01547P58512 204 aaPredicted RBP9.6□□□□□ -0.87
HMGN1-204ENST00000380749 ST20-AS1Q8NBB2 130 aa9.6□□□□□ -0.87
HMGN1-204ENST00000380749 SPANXCQ9NY87 97 aa9.6□□□□□ -0.87
HMGN1-204ENST00000380749 SLC25A34Q6PIV7 304 aa9.58□□□□□ -0.88
HMGN1-204ENST00000380749 OR13C6PQ8NH95 151 aa9.58□□□□□ -0.88
HMGN1-204ENST00000380749 COLCA2A8K830 154 aa9.57□□□□□ -0.88
HMGN1-204ENST00000380749 LINC00308Q8TCZ7 52 aa9.57□□□□□ -0.88
HMGN1-204ENST00000380749 SYS1-DBNDD2H3BUS1 97 aa9.56□□□□□ -0.88
HMGN1-204ENST00000380749 TIMM17BO60830 172 aa9.56□□□□□ -0.88
HMGN1-204ENST00000380749 XP32Q5T750 250 aa9.56□□□□□ -0.88
HMGN1-204ENST00000380749 LIMD2Q9BT23 127 aa9.56□□□□□ -0.88
HMGN1-204ENST00000380749 DHRS4-AS1Q9P1J3 65 aa9.56□□□□□ -0.88
HMGN1-204ENST00000380749 LITAFQ99732 161 aa9.55□□□□□ -0.88
HMGN1-204ENST00000380749 SPANXDQ9BXN6 97 aa9.55□□□□□ -0.88
HMGN1-204ENST00000380749 KRTAP4-1Q9BYQ7 146 aa9.55□□□□□ -0.88
HMGN1-204ENST00000380749 SPRR1BP22528 89 aa9.53□□□□□ -0.88
HMGN1-204ENST00000380749 SLC7A5P1Q8MH63 180 aa9.53□□□□□ -0.88
HMGN1-204ENST00000380749 ZNF815PA8K554 130 aa9.52□□□□□ -0.88
HMGN1-204ENST00000380749 LINC01545Q5VT33 79 aa9.52□□□□□ -0.88
HMGN1-204ENST00000380749 LAMTOR3Q9UHA4 124 aa9.52□□□□□ -0.88
HMGN1-204ENST00000380749 KRTAP9-6A0A140TA67 174 aa9.5□□□□□ -0.89
HMGN1-204ENST00000380749 PET117Q6UWS5 81 aa9.5□□□□□ -0.89
HMGN1-204ENST00000380749 HIST1H2BKO60814 126 aa9.5□□□□□ -0.89
HMGN1-204ENST00000380749 HIST1H2BJP06899 126 aa9.5□□□□□ -0.89
HMGN1-204ENST00000380749 HIST1H2BOP23527 126 aa9.5□□□□□ -0.89
HMGN1-204ENST00000380749 COX7BP24311 80 aa9.5□□□□□ -0.89
HMGN1-204ENST00000380749 HIST1H2BBP33778 126 aa9.5□□□□□ -0.89
HMGN1-204ENST00000380749 HIST1H2BDP58876 126 aa9.5□□□□□ -0.89
HMGN1-204ENST00000380749 ELOF1P60002 83 aaKnown RBP9.5□□□□□ -0.89
HMGN1-204ENST00000380749 HIST1H2BCP62807 126 aa9.5□□□□□ -0.89
HMGN1-204ENST00000380749 HIST2H2BEQ16778 126 aa9.5□□□□□ -0.89
HMGN1-204ENST00000380749 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.5□□□□□ -0.89
HMGN1-204ENST00000380749 LINC00518Q8N0U6 118 aa9.5□□□□□ -0.89
HMGN1-204ENST00000380749 HIST1H2BHQ93079 126 aa9.5□□□□□ -0.89
HMGN1-204ENST00000380749 HIST1H2BNQ99877 126 aa9.5□□□□□ -0.89
HMGN1-204ENST00000380749 HIST1H2BMQ99879 126 aa9.5□□□□□ -0.89
HMGN1-204ENST00000380749 HRCT1Q6UXD1 115 aa9.49□□□□□ -0.89
HMGN1-204ENST00000380749 C6orf99Q4VX62 202 aa9.48□□□□□ -0.89
HMGN1-204ENST00000380749 TAL2Q16559 108 aa9.46□□□□□ -0.9
HMGN1-204ENST00000380749 COPS9Q8WXC6 57 aa9.45□□□□□ -0.9
HMGN1-204ENST00000380749 TTTY13Q9BZ97 58 aa9.45□□□□□ -0.9
HMGN1-204ENST00000380749 CD164Q04900 197 aa9.44□□□□□ -0.9
HMGN1-204ENST00000380749 Q1RN00 199 aa9.44□□□□□ -0.9
HMGN1-204ENST00000380749 SCGB1D4Q6XE38 83 aa9.44□□□□□ -0.9
HMGN1-204ENST00000380749 PRO1933Q9H354 126 aa9.44□□□□□ -0.9
HMGN1-204ENST00000380749 DEFB105AQ8NG35 78 aa9.43□□□□□ -0.9
HMGN1-204ENST00000380749 TRBV7-6A0A0J9YX20 115 aa9.42□□□□□ -0.9
HMGN1-204ENST00000380749 TEX49A0A1B0GTD5 131 aa9.42□□□□□ -0.9
HMGN1-204ENST00000380749 C9orf92A6NGG3 77 aa9.42□□□□□ -0.9
HMGN1-204ENST00000380749 C3orf79P0CE67 100 aa9.42□□□□□ -0.9
HMGN1-204ENST00000380749 A0A1B0GWB2 263 aa9.4□□□□□ -0.9
HMGN1-204ENST00000380749 C20orf202A1L168 122 aa9.4□□□□□ -0.9
HMGN1-204ENST00000380749 H7C2G1 150 aa9.4□□□□□ -0.9
HMGN1-204ENST00000380749 KRTDAPP60985 99 aa9.4□□□□□ -0.9
HMGN1-204ENST00000380749 PCOTHQ58A44 107 aa9.4□□□□□ -0.9
HMGN1-204ENST00000380749 IFITM1P13164 125 aa9.38□□□□□ -0.91
HMGN1-204ENST00000380749 IGLV8-61A0A075B6I0 122 aa9.37□□□□□ -0.91
HMGN1-204ENST00000380749 A6NDN8 102 aa9.37□□□□□ -0.91
HMGN1-204ENST00000380749 Q6ZVH6 145 aa9.37□□□□□ -0.91
HMGN1-204ENST00000380749 AKR1D1P51857 326 aa9.37□□□□□ -0.91
HMGN1-204ENST00000380749 IGLV5-48A0A075B6I7 105 aa9.36□□□□□ -0.91
HMGN1-204ENST00000380749 Q5XG85 94 aa9.36□□□□□ -0.91
HMGN1-204ENST00000380749 A4D1N5 150 aa9.35□□□□□ -0.91
HMGN1-204ENST00000380749 ANKRD39Q53RE8 183 aa9.35□□□□□ -0.91
HMGN1-204ENST00000380749 COA6Q5JTJ3 125 aaKnown RBP9.35□□□□□ -0.91
HMGN1-204ENST00000380749 NHP2Q9NX24 153 aaKnown RBP9.35□□□□□ -0.91
HMGN1-204ENST00000380749 FSIP2Q5CZC0 6907 aa9.34□□□□□ -0.91
HMGN1-204ENST00000380749 LCE2CQ5TA81 110 aa9.34□□□□□ -0.91
HMGN1-204ENST00000380749 SMIM29Q86T20 159 aa9.34□□□□□ -0.91
HMGN1-204ENST00000380749 TRAV13-2A0A0B4J235 113 aa9.31□□□□□ -0.92
HMGN1-204ENST00000380749 MUSTN1Q8IVN3 82 aa9.31□□□□□ -0.92
HMGN1-204ENST00000380749 ATOH7Q8N100 152 aa9.31□□□□□ -0.92
HMGN1-204ENST00000380749 KRTAP19-2Q3LHN2 52 aa9.3□□□□□ -0.92
HMGN1-204ENST00000380749 C1orf195Q5TG92 126 aa9.3□□□□□ -0.92
HMGN1-204ENST00000380749 PCP2Q8IVA1 136 aa9.3□□□□□ -0.92
HMGN1-204ENST00000380749 CFC1BP0CG36 223 aa9.28□□□□□ -0.92
HMGN1-204ENST00000380749 MT1HP80294 61 aa9.28□□□□□ -0.92
HMGN1-204ENST00000380749 A0A0G2JQZ4 141 aa9.27□□□□□ -0.93
HMGN1-204ENST00000380749 F8WEM9 126 aa9.27□□□□□ -0.93
HMGN1-204ENST00000380749 TCL1BO95988 128 aa9.27□□□□□ -0.93
HMGN1-204ENST00000380749 SMIM11BQ8TCY0 68 aa9.27□□□□□ -0.93
HMGN1-204ENST00000380749 FLGP20930 4061 aaPredicted RBP9.27□□□□□ -0.93
HMGN1-204ENST00000380749 RPL37P61927 97 aaKnown RBP9.25□□□□□ -0.93
HMGN1-204ENST00000380749 SNRPEP62304 92 aaKnown RBP9.24□□□□□ -0.93
HMGN1-204ENST00000380749 VAMP3Q15836 100 aa9.24□□□□□ -0.93
HMGN1-204ENST00000380749 CRCT1Q9UGL9 99 aa9.2□□□□□ -0.94
HMGN1-204ENST00000380749 HSBP1L1C9JCN9 74 aa9.18□□□□□ -0.94
HMGN1-204ENST00000380749 Q6JHZ5 121 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms