RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 NPC2P61916 151 aa5.58□□□□□ -1.52
HMGN1-202ENST00000380747 HIST1H2BLQ99880 126 aa5.58□□□□□ -1.52
HMGN1-202ENST00000380747 MIEN1Q9BRT3 115 aa5.58□□□□□ -1.52
HMGN1-202ENST00000380747 AKR1D1P51857 326 aa5.57□□□□□ -1.52
HMGN1-202ENST00000380747 FAM19A1Q7Z5A9 133 aa5.57□□□□□ -1.52
HMGN1-202ENST00000380747 KRTAP4-11Q9BYQ6 195 aa5.57□□□□□ -1.52
HMGN1-202ENST00000380747 TTTY13Q9BZ97 58 aa5.57□□□□□ -1.52
HMGN1-202ENST00000380747 TMEM126AQ9H061 195 aa5.57□□□□□ -1.52
HMGN1-202ENST00000380747 SNRPEP62304 92 aaKnown RBP5.56□□□□□ -1.52
HMGN1-202ENST00000380747 ADAMTSL4-AS1Q5T5F5 129 aa5.56□□□□□ -1.52
HMGN1-202ENST00000380747 LOC107984156A0A0G2JMH3 177 aa5.55□□□□□ -1.52
HMGN1-202ENST00000380747 KRTAP10-8P60410 259 aa5.55□□□□□ -1.52
HMGN1-202ENST00000380747 PRLHP81277 87 aa5.55□□□□□ -1.52
HMGN1-202ENST00000380747 SOSTDC1Q6X4U4 206 aa5.55□□□□□ -1.52
HMGN1-202ENST00000380747 ARL17AQ8IVW1 177 aa5.55□□□□□ -1.52
HMGN1-202ENST00000380747 PRR26Q8N8Z3 221 aa5.55□□□□□ -1.52
HMGN1-202ENST00000380747 TRBV10-3A0A0K0K1G6 114 aa5.54□□□□□ -1.52
HMGN1-202ENST00000380747 TIMM17BO60830 172 aa5.54□□□□□ -1.52
HMGN1-202ENST00000380747 KRTAP1-4P0C5Y4 121 aa5.54□□□□□ -1.52
HMGN1-202ENST00000380747 KRTAP13-1Q8IUC0 172 aa5.54□□□□□ -1.52
HMGN1-202ENST00000380747 LITAFQ99732 161 aa5.54□□□□□ -1.52
HMGN1-202ENST00000380747 KRTAP9-3Q9BYQ3 159 aa5.54□□□□□ -1.52
HMGN1-202ENST00000380747 SPANXB1Q9NS25 103 aaPredicted RBP5.54□□□□□ -1.52
HMGN1-202ENST00000380747 S100A12P80511 92 aa5.53□□□□□ -1.52
HMGN1-202ENST00000380747 SCGB1D4Q6XE38 83 aa5.53□□□□□ -1.52
HMGN1-202ENST00000380747 LINC00308Q8TCZ7 52 aa5.53□□□□□ -1.52
HMGN1-202ENST00000380747 TRBV10-2A0A0K0K1G8 114 aa5.52□□□□□ -1.53
HMGN1-202ENST00000380747 ETDCA0A1B0GVM5 59 aa5.52□□□□□ -1.53
HMGN1-202ENST00000380747 C5orf52A6NGY3 159 aa5.52□□□□□ -1.53
HMGN1-202ENST00000380747 HSBP1L1C9JCN9 74 aa5.52□□□□□ -1.53
HMGN1-202ENST00000380747 NDUFC2O95298 119 aa5.52□□□□□ -1.53
HMGN1-202ENST00000380747 SCGB1D1O95968 90 aa5.52□□□□□ -1.53
HMGN1-202ENST00000380747 DDTP30046 118 aa5.52□□□□□ -1.53
HMGN1-202ENST00000380747 S100A7L2Q5SY68 101 aa5.52□□□□□ -1.53
HMGN1-202ENST00000380747 HIGD2AQ9BW72 106 aa5.52□□□□□ -1.53
HMGN1-202ENST00000380747 KCNQ1DNQ9H478 68 aa5.52□□□□□ -1.53
HMGN1-202ENST00000380747 PCP2Q8IVA1 136 aa5.51□□□□□ -1.53
HMGN1-202ENST00000380747 SPRR1AP35321 89 aa5.5□□□□□ -1.53
HMGN1-202ENST00000380747 RPL13AP40429 203 aaKnown RBP5.5□□□□□ -1.53
HMGN1-202ENST00000380747 LINC00337Q8N6G1 96 aa5.5□□□□□ -1.53
HMGN1-202ENST00000380747 SPANXCQ9NY87 97 aa5.5□□□□□ -1.53
HMGN1-202ENST00000380747 ANAPC11Q9NYG5 84 aa5.5□□□□□ -1.53
HMGN1-202ENST00000380747 LPAP08519 4548 aa5.49□□□□□ -1.53
HMGN1-202ENST00000380747 IGLV6-57P01721 117 aa5.49□□□□□ -1.53
HMGN1-202ENST00000380747 OR13C6PQ8NH95 151 aa5.49□□□□□ -1.53
HMGN1-202ENST00000380747 SPANXDQ9BXN6 97 aa5.49□□□□□ -1.53
HMGN1-202ENST00000380747 MUC2Q02817 5179 aa5.49□□□□□ -1.53
HMGN1-202ENST00000380747 TRAV23DV6A0A075B6W5 121 aa5.48□□□□□ -1.53
HMGN1-202ENST00000380747 CRYGAP11844 174 aa5.48□□□□□ -1.53
HMGN1-202ENST00000380747 A0A087X002 238 aa5.47□□□□□ -1.53
HMGN1-202ENST00000380747 KRTAP4-16G5E9R7 235 aaPredicted RBP5.47□□□□□ -1.53
HMGN1-202ENST00000380747 TYMSOSQ8TAI1 123 aa5.47□□□□□ -1.53
HMGN1-202ENST00000380747 SMCR5Q8TEV8 140 aa5.47□□□□□ -1.53
HMGN1-202ENST00000380747 COPS9Q8WXC6 57 aa5.47□□□□□ -1.53
HMGN1-202ENST00000380747 FAT4Q6V0I7 4981 aa5.46□□□□□ -1.54
HMGN1-202ENST00000380747 IFITM1P13164 125 aa5.46□□□□□ -1.54
HMGN1-202ENST00000380747 Q6ZVH6 145 aa5.46□□□□□ -1.54
HMGN1-202ENST00000380747 MUSTN1Q8IVN3 82 aa5.46□□□□□ -1.54
HMGN1-202ENST00000380747 LINC00518Q8N0U6 118 aa5.46□□□□□ -1.54
HMGN1-202ENST00000380747 CBY1Q9Y3M2 126 aa5.46□□□□□ -1.54
HMGN1-202ENST00000380747 ZNF706Q9Y5V0 76 aaPredicted RBP5.46□□□□□ -1.54
HMGN1-202ENST00000380747 ZNF73O43830 326 aaPredicted RBP5.45□□□□□ -1.54
HMGN1-202ENST00000380747 KRTAP15-1Q3LI76 137 aa5.45□□□□□ -1.54
HMGN1-202ENST00000380747 FAM229BQ4G0N7 80 aa5.45□□□□□ -1.54
HMGN1-202ENST00000380747 SPRR4Q96PI1 79 aa5.45□□□□□ -1.54
HMGN1-202ENST00000380747 HINT1P49773 126 aaPredicted RBP5.44□□□□□ -1.54
HMGN1-202ENST00000380747 JOSD1Q15040 202 aaPredicted RBP5.44□□□□□ -1.54
HMGN1-202ENST00000380747 KRTAP13-2Q52LG2 175 aa5.44□□□□□ -1.54
HMGN1-202ENST00000380747 Q6ZRX8 168 aa5.44□□□□□ -1.54
HMGN1-202ENST00000380747 PPDPFQ9H3Y8 114 aa5.44□□□□□ -1.54
HMGN1-202ENST00000380747 A6NDN8 102 aa5.43□□□□□ -1.54
HMGN1-202ENST00000380747 ERC2-IT1O76042 136 aa5.43□□□□□ -1.54
HMGN1-202ENST00000380747 TSPAN13O95857 204 aa5.42□□□□□ -1.54
HMGN1-202ENST00000380747 COX8AP10176 69 aa5.42□□□□□ -1.54
HMGN1-202ENST00000380747 SPATA45Q537H7 98 aa5.42□□□□□ -1.54
HMGN1-202ENST00000380747 GAGE2AQ6NT46 116 aa5.42□□□□□ -1.54
HMGN1-202ENST00000380747 Q9BRP9 147 aa5.42□□□□□ -1.54
HMGN1-202ENST00000380747 PAM16Q9Y3D7 125 aa5.42□□□□□ -1.54
HMGN1-202ENST00000380747 C6orf99Q4VX62 202 aa5.41□□□□□ -1.54
HMGN1-202ENST00000380747 C3orf22Q8N5N4 141 aa5.41□□□□□ -1.54
HMGN1-202ENST00000380747 VAMP8Q9BV40 100 aa5.41□□□□□ -1.54
HMGN1-202ENST00000380747 COX7BP24311 80 aa5.4□□□□□ -1.54
HMGN1-202ENST00000380747 C14orf144Q96I85 54 aa5.4□□□□□ -1.54
HMGN1-202ENST00000380747 HIST1H4GQ99525 98 aa5.4□□□□□ -1.54
HMGN1-202ENST00000380747 TRAV13-2A0A0B4J235 113 aa5.39□□□□□ -1.55
HMGN1-202ENST00000380747 A4D1N5 150 aa5.39□□□□□ -1.55
HMGN1-202ENST00000380747 DLEU1O43261 78 aa5.39□□□□□ -1.55
HMGN1-202ENST00000380747 LINC00483Q53H64 154 aa5.39□□□□□ -1.55
HMGN1-202ENST00000380747 LINC00304Q8N9R0 145 aa5.39□□□□□ -1.55
HMGN1-202ENST00000380747 A0A0A0MQY5 61 aa5.38□□□□□ -1.55
HMGN1-202ENST00000380747 ELOF1P60002 83 aaKnown RBP5.38□□□□□ -1.55
HMGN1-202ENST00000380747 LCE5AQ5TCM9 118 aa5.38□□□□□ -1.55
HMGN1-202ENST00000380747 ST20-AS1Q8NBB2 130 aa5.38□□□□□ -1.55
HMGN1-202ENST00000380747 DHRS4-AS1Q9P1J3 65 aa5.38□□□□□ -1.55
HMGN1-202ENST00000380747 IGLV9-49A0A0B4J1Y8 123 aa5.37□□□□□ -1.55
HMGN1-202ENST00000380747 SLC25A34Q6PIV7 304 aa5.37□□□□□ -1.55
HMGN1-202ENST00000380747 C12orf57Q99622 126 aa5.37□□□□□ -1.55
HMGN1-202ENST00000380747 A0A1B0GWB2 263 aa5.36□□□□□ -1.55
HMGN1-202ENST00000380747 MOBPQ13875 183 aa5.36□□□□□ -1.55
HMGN1-202ENST00000380747 PRR4Q16378 134 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms