RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 PLA2G2DQ9UNK4 145 aa8.21□□□□□ -1.1
CHD3-203ENST00000380358 PKD1L2Q7Z442 2459 aa8.2□□□□□ -1.1
CHD3-203ENST00000380358 A0A1B0GVX0 72 aa8.2□□□□□ -1.1
CHD3-203ENST00000380358 H3BNG1 76 aa8.2□□□□□ -1.1
CHD3-203ENST00000380358 A0A087WTM6 91 aa8.19□□□□□ -1.1
CHD3-203ENST00000380358 LOC110117498A0A087WWA1 95 aa8.19□□□□□ -1.1
CHD3-203ENST00000380358 PRR15Q8IV56 129 aa8.19□□□□□ -1.1
CHD3-203ENST00000380358 PIEZO1Q92508 2521 aa8.18□□□□□ -1.1
CHD3-203ENST00000380358 TLX1NBP0CAT3 122 aa8.18□□□□□ -1.1
CHD3-203ENST00000380358 CENPFP49454 3210 aa8.18□□□□□ -1.1
CHD3-203ENST00000380358 EP400Q96L91 3159 aa8.18□□□□□ -1.1
CHD3-203ENST00000380358 PSORS1C2Q9UIG4 136 aa8.16□□□□□ -1.1
CHD3-203ENST00000380358 LINC00483Q53H64 154 aa8.15□□□□□ -1.1
CHD3-203ENST00000380358 CASC10Q5T4H9 136 aa8.14□□□□□ -1.11
CHD3-203ENST00000380358 IGLV7-43P04211 117 aa8.14□□□□□ -1.11
CHD3-203ENST00000380358 PRR26Q8N8Z3 221 aa8.14□□□□□ -1.11
CHD3-203ENST00000380358 USP9XQ93008 2570 aaPredicted RBP8.14□□□□□ -1.11
CHD3-203ENST00000380358 FAM104AQ969W3 186 aa8.14□□□□□ -1.11
CHD3-203ENST00000380358 COX8CQ7Z4L0 72 aa8.14□□□□□ -1.11
CHD3-203ENST00000380358 IGLV7-46A0A075B6I9 117 aa8.11□□□□□ -1.11
CHD3-203ENST00000380358 MUC22E2RYF6 1773 aaPredicted RBP8.11□□□□□ -1.11
CHD3-203ENST00000380358 Q8N377 158 aa8.1□□□□□ -1.11
CHD3-203ENST00000380358 POLQO75417 2590 aa8.09□□□□□ -1.11
CHD3-203ENST00000380358 CD164Q04900 197 aa8.09□□□□□ -1.11
CHD3-203ENST00000380358 ANKRD17O75179 2603 aaKnown RBP8.08□□□□□ -1.12
CHD3-203ENST00000380358 ERC2-IT1O76042 136 aa8.07□□□□□ -1.12
CHD3-203ENST00000380358 CR1P17927 2039 aa8.06□□□□□ -1.12
CHD3-203ENST00000380358 A0A1B0GW54 56 aa8.06□□□□□ -1.12
CHD3-203ENST00000380358 KRTAP10-3P60369 221 aa8.06□□□□□ -1.12
CHD3-203ENST00000380358 SPTBN4Q9H254 2564 aa8.05□□□□□ -1.12
CHD3-203ENST00000380358 KCNQ1DNQ9H478 68 aa8.05□□□□□ -1.12
CHD3-203ENST00000380358 BPTFQ12830 3046 aa8.05□□□□□ -1.12
CHD3-203ENST00000380358 CYP4F30PQ9H0H9 118 aa8.05□□□□□ -1.12
CHD3-203ENST00000380358 TNP2Q05952 138 aa8.04□□□□□ -1.12
CHD3-203ENST00000380358 LINC00612Q8N6U2 182 aa8.04□□□□□ -1.12
CHD3-203ENST00000380358 EIF4EBP3O60516 100 aaPredicted RBP8.02□□□□□ -1.13
CHD3-203ENST00000380358 MTORP42345 2549 aa8.02□□□□□ -1.13
CHD3-203ENST00000380358 PCSK5Q92824 1860 aa8.02□□□□□ -1.13
CHD3-203ENST00000380358 C9orf163Q8N9P6 203 aa8.01□□□□□ -1.13
CHD3-203ENST00000380358 USP24Q9UPU5 2620 aa8.01□□□□□ -1.13
CHD3-203ENST00000380358 LINC01546A6NGU7 62 aa8.01□□□□□ -1.13
CHD3-203ENST00000380358 RPS28P62857 69 aaKnown RBP8□□□□□ -1.13
CHD3-203ENST00000380358 PRO0461Q9UI25 63 aa8□□□□□ -1.13
CHD3-203ENST00000380358 FLG2Q5D862 2391 aaPredicted RBP8□□□□□ -1.13
CHD3-203ENST00000380358 Q5VSD8 79 aa7.99□□□□□ -1.13
CHD3-203ENST00000380358 SPRR4Q96PI1 79 aa7.99□□□□□ -1.13
CHD3-203ENST00000380358 COL4A2P08572 1712 aa7.98□□□□□ -1.13
CHD3-203ENST00000380358 Q1T7F1 81 aa7.98□□□□□ -1.13
CHD3-203ENST00000380358 LCA10Q71F78 164 aa7.96□□□□□ -1.13
CHD3-203ENST00000380358 KTN1-AS1Q86SY8 53 aa7.96□□□□□ -1.14
CHD3-203ENST00000380358 S4R3F8 94 aa7.96□□□□□ -1.14
CHD3-203ENST00000380358 LITAFQ99732 161 aa7.96□□□□□ -1.14
CHD3-203ENST00000380358 A0A1B0GU33 70 aa7.94□□□□□ -1.14
CHD3-203ENST00000380358 CHD8Q9HCK8 2581 aa7.93□□□□□ -1.14
CHD3-203ENST00000380358 C19orf73Q9NVV2 129 aa7.92□□□□□ -1.14
CHD3-203ENST00000380358 FASNP49327 2511 aaKnown RBP7.91□□□□□ -1.14
CHD3-203ENST00000380358 DNAH12Q6ZR08 3092 aa7.91□□□□□ -1.14
CHD3-203ENST00000380358 R4GN34 69 aa7.89□□□□□ -1.15
CHD3-203ENST00000380358 ANKRD11Q6UB99 2663 aaPredicted RBP7.89□□□□□ -1.15
CHD3-203ENST00000380358 SPINK7P58062 85 aa7.88□□□□□ -1.15
CHD3-203ENST00000380358 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.87□□□□□ -1.15
CHD3-203ENST00000380358 USP9YO00507 2555 aaPredicted RBP7.87□□□□□ -1.15
CHD3-203ENST00000380358 H1FX-AS1Q4G0G2 97 aa7.87□□□□□ -1.15
CHD3-203ENST00000380358 A0A1W2PNM2 257 aa7.87□□□□□ -1.15
CHD3-203ENST00000380358 HRES1P13985 223 aa7.86□□□□□ -1.15
CHD3-203ENST00000380358 CSAG1Q6PB30 78 aa7.85□□□□□ -1.15
CHD3-203ENST00000380358 GIG44P09565 113 aaPredicted RBP7.85□□□□□ -1.15
CHD3-203ENST00000380358 PRAC1Q96KF2 57 aa7.85□□□□□ -1.15
CHD3-203ENST00000380358 PRR34Q9NV39 138 aa7.84□□□□□ -1.15
CHD3-203ENST00000380358 CEP350Q5VT06 3117 aa7.84□□□□□ -1.15
CHD3-203ENST00000380358 H7BZZ5 65 aa7.83□□□□□ -1.16
CHD3-203ENST00000380358 PLAC4Q8WY50 150 aa7.82□□□□□ -1.16
CHD3-203ENST00000380358 A0A0A0MQY5 61 aa7.78□□□□□ -1.16
CHD3-203ENST00000380358 Q8N9P0 234 aaPredicted RBP7.77□□□□□ -1.17
CHD3-203ENST00000380358 KLKP1Q107X0 134 aa7.77□□□□□ -1.17
CHD3-203ENST00000380358 M0QZ58 72 aa7.76□□□□□ -1.17
CHD3-203ENST00000380358 MGAM2Q2M2H8 2515 aa7.75□□□□□ -1.17
CHD3-203ENST00000380358 CNBPP62633 177 aaKnown RBP7.75□□□□□ -1.17
CHD3-203ENST00000380358 LAMA3Q16787 3333 aa7.74□□□□□ -1.17
CHD3-203ENST00000380358 BRCA2P51587 3418 aa7.74□□□□□ -1.17
CHD3-203ENST00000380358 H3BS24 57 aa7.73□□□□□ -1.17
CHD3-203ENST00000380358 ZCCHC13Q8WW36 166 aaKnown RBP7.72□□□□□ -1.17
CHD3-203ENST00000380358 DMAC1Q96GE9 116 aa7.7□□□□□ -1.18
CHD3-203ENST00000380358 SPANXA2-OT1Q8N9U9 137 aa7.68□□□□□ -1.18
CHD3-203ENST00000380358 SEC61BP60468 96 aaKnown RBP7.68□□□□□ -1.18
CHD3-203ENST00000380358 EPG5Q9HCE0 2579 aa7.68□□□□□ -1.18
CHD3-203ENST00000380358 FAM229BQ4G0N7 80 aa7.67□□□□□ -1.18
CHD3-203ENST00000380358 ADM2Q7Z4H4 148 aa7.65□□□□□ -1.19
CHD3-203ENST00000380358 C10orf142B7Z368 130 aa7.64□□□□□ -1.19
CHD3-203ENST00000380358 CEP295Q9C0D2 2601 aa7.64□□□□□ -1.19
CHD3-203ENST00000380358 C5orf42Q9H799 3197 aa7.64□□□□□ -1.19
CHD3-203ENST00000380358 LAMA2P24043 3122 aaKnown RBP7.63□□□□□ -1.19
CHD3-203ENST00000380358 SPATA8Q6RVD6 105 aa7.62□□□□□ -1.19
CHD3-203ENST00000380358 PRRC2CQ9Y520 2896 aaKnown RBP7.62□□□□□ -1.19
CHD3-203ENST00000380358 Q5W150 140 aa7.6□□□□□ -1.19
CHD3-203ENST00000380358 ATRQ13535 2644 aa7.58□□□□□ -1.2
CHD3-203ENST00000380358 MKI67P46013 3256 aaKnown RBP7.57□□□□□ -1.2
CHD3-203ENST00000380358 OCR1Q9BZK8 76 aa7.57□□□□□ -1.2
CHD3-203ENST00000380358 A0A096LNT2 108 aa7.57□□□□□ -1.2
CHD3-203ENST00000380358 FP248Q71RG6 208 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms