RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 TRAV12-1A0A0B4J245 112 aa2.64□□□□□ -1.99
C9orf72-203ENST00000380003 KRTAP4-16G5E9R7 235 aaPredicted RBP2.64□□□□□ -1.99
C9orf72-203ENST00000380003 DDTP30046 118 aa2.64□□□□□ -1.99
C9orf72-203ENST00000380003 S100A7L2Q5SY68 101 aa2.64□□□□□ -1.99
C9orf72-203ENST00000380003 MYMXA0A1B0GTQ4 84 aa2.64□□□□□ -1.99
C9orf72-203ENST00000380003 DEFB105AQ8NG35 78 aa2.64□□□□□ -1.99
C9orf72-203ENST00000380003 OR13C6PQ8NH95 151 aa2.64□□□□□ -1.99
C9orf72-203ENST00000380003 IGKCP01834 107 aa2.63□□□□□ -1.99
C9orf72-203ENST00000380003 LGALS3P17931 250 aaKnown RBP2.63□□□□□ -1.99
C9orf72-203ENST00000380003 Q1RN00 199 aa2.63□□□□□ -1.99
C9orf72-203ENST00000380003 C9orf153Q5TBE3 101 aa2.63□□□□□ -1.99
C9orf72-203ENST00000380003 KCNQ1DNQ9H478 68 aa2.63□□□□□ -1.99
C9orf72-203ENST00000380003 B5MCH6 92 aa2.63□□□□□ -1.99
C9orf72-203ENST00000380003 HIST1H2BKO60814 126 aa2.63□□□□□ -1.99
C9orf72-203ENST00000380003 DPM2O94777 84 aa2.63□□□□□ -1.99
C9orf72-203ENST00000380003 HIST1H2BJP06899 126 aa2.63□□□□□ -1.99
C9orf72-203ENST00000380003 HIST1H2BOP23527 126 aa2.63□□□□□ -1.99
C9orf72-203ENST00000380003 HIST1H2BBP33778 126 aa2.63□□□□□ -1.99
C9orf72-203ENST00000380003 HIST1H2BDP58876 126 aa2.63□□□□□ -1.99
C9orf72-203ENST00000380003 HIST1H2BCP62807 126 aa2.63□□□□□ -1.99
C9orf72-203ENST00000380003 HIST2H2BEQ16778 126 aa2.63□□□□□ -1.99
C9orf72-203ENST00000380003 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.63□□□□□ -1.99
C9orf72-203ENST00000380003 HIST1H2BHQ93079 126 aa2.63□□□□□ -1.99
C9orf72-203ENST00000380003 HIST1H2BNQ99877 126 aa2.63□□□□□ -1.99
C9orf72-203ENST00000380003 HIST1H2BMQ99879 126 aa2.63□□□□□ -1.99
C9orf72-203ENST00000380003 A0A0J9YXY3 114 aa2.63□□□□□ -1.99
C9orf72-203ENST00000380003 C9orf92A6NGG3 77 aa2.62□□□□□ -1.99
C9orf72-203ENST00000380003 LEPROTO15243 131 aa2.62□□□□□ -1.99
C9orf72-203ENST00000380003 SPRR1AP35321 89 aa2.62□□□□□ -1.99
C9orf72-203ENST00000380003 FAM229BQ4G0N7 80 aa2.62□□□□□ -1.99
C9orf72-203ENST00000380003 TRAV23DV6A0A075B6W5 121 aa2.61□□□□□ -1.99
C9orf72-203ENST00000380003 PLNP26678 52 aa2.61□□□□□ -1.99
C9orf72-203ENST00000380003 KRTDAPP60985 99 aa2.61□□□□□ -1.99
C9orf72-203ENST00000380003 HERV-K104P63124 156 aa2.61□□□□□ -1.99
C9orf72-203ENST00000380003 Q6ZRX8 168 aa2.61□□□□□ -1.99
C9orf72-203ENST00000380003 LINC00337Q8N6G1 96 aa2.61□□□□□ -1.99
C9orf72-203ENST00000380003 HSPB8Q9UJY1 196 aa2.61□□□□□ -1.99
C9orf72-203ENST00000380003 MUC17Q685J3 4493 aa2.61□□□□□ -1.99
C9orf72-203ENST00000380003 SYS1-DBNDD2H3BUS1 97 aa2.61□□□□□ -1.99
C9orf72-203ENST00000380003 PRYO14603 147 aa2.61□□□□□ -1.99
C9orf72-203ENST00000380003 ZNF73O43830 326 aaPredicted RBP2.61□□□□□ -1.99
C9orf72-203ENST00000380003 NMUP48645 174 aa2.61□□□□□ -1.99
C9orf72-203ENST00000380003 TPRXLQ17RH7 258 aa2.61□□□□□ -1.99
C9orf72-203ENST00000380003 SVIPQ8NHG7 77 aa2.61□□□□□ -1.99
C9orf72-203ENST00000380003 ZNF815PA8K554 130 aa2.6□□□□□ -1.99
C9orf72-203ENST00000380003 IGLV6-57P01721 117 aa2.6□□□□□ -1.99
C9orf72-203ENST00000380003 C3orf79P0CE67 100 aa2.6□□□□□ -1.99
C9orf72-203ENST00000380003 KRTAP13-3Q3SY46 172 aa2.6□□□□□ -1.99
C9orf72-203ENST00000380003 LITAFQ99732 161 aa2.6□□□□□ -1.99
C9orf72-203ENST00000380003 HERVK_113P61574 105 aa2.6□□□□□ -1.99
C9orf72-203ENST00000380003 C6orf99Q4VX62 202 aa2.6□□□□□ -1.99
C9orf72-203ENST00000380003 SFTA2Q6UW10 78 aa2.6□□□□□ -1.99
C9orf72-203ENST00000380003 PCP2Q8IVA1 136 aa2.6□□□□□ -1.99
C9orf72-203ENST00000380003 LINC00308Q8TCZ7 52 aa2.6□□□□□ -1.99
C9orf72-203ENST00000380003 E9PLD3 99 aa2.59□□□□□ -1.99
C9orf72-203ENST00000380003 GHRHP01286 108 aa2.59□□□□□ -1.99
C9orf72-203ENST00000380003 Q8N377 158 aa2.59□□□□□ -1.99
C9orf72-203ENST00000380003 SPANXB1Q9NS25 103 aaPredicted RBP2.59□□□□□ -1.99
C9orf72-203ENST00000380003 ANKRD39Q53RE8 183 aa2.59□□□□□ -1.99
C9orf72-203ENST00000380003 SCGB1D4Q6XE38 83 aa2.59□□□□□ -2
C9orf72-203ENST00000380003 USH2AO75445 5202 aa2.59□□□□□ -2
C9orf72-203ENST00000380003 A6NDN8 102 aa2.58□□□□□ -2
C9orf72-203ENST00000380003 SPINK1P00995 79 aa2.58□□□□□ -2
C9orf72-203ENST00000380003 S100A12P80511 92 aa2.58□□□□□ -2
C9orf72-203ENST00000380003 ZNF706Q9Y5V0 76 aaPredicted RBP2.58□□□□□ -2
C9orf72-203ENST00000380003 LINC00483Q53H64 154 aa2.58□□□□□ -2
C9orf72-203ENST00000380003 C12orf57Q99622 126 aa2.58□□□□□ -2
C9orf72-203ENST00000380003 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
C9orf72-203ENST00000380003 LINC00587B1AMM8 73 aa2.57□□□□□ -2
C9orf72-203ENST00000380003 LINC01545Q5VT33 79 aa2.57□□□□□ -2
C9orf72-203ENST00000380003 SPAG11AQ6PDA7 123 aa2.57□□□□□ -2
C9orf72-203ENST00000380003 SPANXCQ9NY87 97 aa2.57□□□□□ -2
C9orf72-203ENST00000380003 TRBV10-2A0A0K0K1G8 114 aa2.57□□□□□ -2
C9orf72-203ENST00000380003 TAL2Q16559 108 aa2.57□□□□□ -2
C9orf72-203ENST00000380003 PCOTHQ58A44 107 aa2.57□□□□□ -2
C9orf72-203ENST00000380003 MUSTN1Q8IVN3 82 aa2.57□□□□□ -2
C9orf72-203ENST00000380003 LOC107984156A0A0G2JMH3 177 aa2.56□□□□□ -2
C9orf72-203ENST00000380003 A0A0U1RQV1 116 aa2.56□□□□□ -2
C9orf72-203ENST00000380003 ARL17AQ8IVW1 177 aa2.56□□□□□ -2
C9orf72-203ENST00000380003 TMEM238LA0A1B0GVL6 79 aa2.56□□□□□ -2
C9orf72-203ENST00000380003 NDUFC2O95298 119 aa2.56□□□□□ -2
C9orf72-203ENST00000380003 HINT1P49773 126 aaPredicted RBP2.56□□□□□ -2
C9orf72-203ENST00000380003 LINC00518Q8N0U6 118 aa2.56□□□□□ -2
C9orf72-203ENST00000380003 IGLV8-61A0A075B6I0 122 aa2.55□□□□□ -2
C9orf72-203ENST00000380003 JOSD1Q15040 202 aaPredicted RBP2.55□□□□□ -2
C9orf72-203ENST00000380003 COX7BP24311 80 aa2.55□□□□□ -2
C9orf72-203ENST00000380003 SSBP3-AS1Q7Z2R9 100 aa2.55□□□□□ -2
C9orf72-203ENST00000380003 ELOF1P60002 83 aaKnown RBP2.54□□□□□ -2
C9orf72-203ENST00000380003 ASB16-AS1Q495Z4 193 aa2.54□□□□□ -2
C9orf72-203ENST00000380003 PET117Q6UWS5 81 aa2.54□□□□□ -2
C9orf72-203ENST00000380003 SLC25A20O43772 301 aa2.54□□□□□ -2
C9orf72-203ENST00000380003 FP248Q71RG6 208 aaPredicted RBP2.54□□□□□ -2
C9orf72-203ENST00000380003 SMIM29Q86T20 159 aa2.54□□□□□ -2
C9orf72-203ENST00000380003 SMIM11BQ8TCY0 68 aa2.54□□□□□ -2
C9orf72-203ENST00000380003 A0A1B0GV72 72 aa2.53□□□□□ -2
C9orf72-203ENST00000380003 LINC01547P58512 204 aaPredicted RBP2.53□□□□□ -2
C9orf72-203ENST00000380003 SEC61BP60468 96 aaKnown RBP2.53□□□□□ -2.01
C9orf72-203ENST00000380003 SPANXDQ9BXN6 97 aa2.53□□□□□ -2.01
C9orf72-203ENST00000380003 LAMTOR3Q9UHA4 124 aa2.53□□□□□ -2.01
C9orf72-203ENST00000380003 HIST1H2BLQ99880 126 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms