RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 Q8N9P0 234 aaPredicted RBP4.3□□□□□ -1.72
CDKAL1-202ENST00000378610 A0A1W2PNM2 257 aa4.29□□□□□ -1.72
CDKAL1-202ENST00000378610 SPAG11BQ08648 103 aa4.29□□□□□ -1.72
CDKAL1-202ENST00000378610 LCA10Q71F78 164 aa4.29□□□□□ -1.72
CDKAL1-202ENST00000378610 KPRPQ5T749 579 aaPredicted RBP4.29□□□□□ -1.72
CDKAL1-202ENST00000378610 PLAC8Q9NZF1 115 aa4.29□□□□□ -1.72
CDKAL1-202ENST00000378610 PRO0255Q9UI72 69 aa4.28□□□□□ -1.72
CDKAL1-202ENST00000378610 MUC6Q6W4X9 2439 aa4.28□□□□□ -1.72
CDKAL1-202ENST00000378610 CACNA1HO95180 2353 aa4.28□□□□□ -1.72
CDKAL1-202ENST00000378610 CLPSL2Q6UWE3 100 aa4.28□□□□□ -1.72
CDKAL1-202ENST00000378610 ATP11AUNQ6ZP68 121 aa4.28□□□□□ -1.72
CDKAL1-202ENST00000378610 LIMD2Q9BT23 127 aa4.28□□□□□ -1.72
CDKAL1-202ENST00000378610 UBE2AP49459 152 aa4.28□□□□□ -1.72
CDKAL1-202ENST00000378610 ST20-AS1Q8NBB2 130 aa4.28□□□□□ -1.72
CDKAL1-202ENST00000378610 IGLV1-51P01701 117 aa4.27□□□□□ -1.73
CDKAL1-202ENST00000378610 KRTAP26-1Q6PEX3 210 aa4.27□□□□□ -1.73
CDKAL1-202ENST00000378610 ZNF462Q96JM2 2506 aa4.27□□□□□ -1.73
CDKAL1-202ENST00000378610 MXRA5Q9NR99 2828 aa4.26□□□□□ -1.73
CDKAL1-202ENST00000378610 LRCOL1A6NCL2 159 aa4.26□□□□□ -1.73
CDKAL1-202ENST00000378610 H3BPC8 53 aa4.26□□□□□ -1.73
CDKAL1-202ENST00000378610 C9orf163Q8N9P6 203 aa4.26□□□□□ -1.73
CDKAL1-202ENST00000378610 CUBNO60494 3623 aa4.26□□□□□ -1.73
CDKAL1-202ENST00000378610 SETXQ7Z333 2677 aaKnown RBP4.26□□□□□ -1.73
CDKAL1-202ENST00000378610 KRTAP29-1A8MX34 341 aaPredicted RBP4.26□□□□□ -1.73
CDKAL1-202ENST00000378610 C3orf84H3BNL1 204 aa4.26□□□□□ -1.73
CDKAL1-202ENST00000378610 K7EQZ3 153 aa4.25□□□□□ -1.73
CDKAL1-202ENST00000378610 SPRR1AP35321 89 aa4.25□□□□□ -1.73
CDKAL1-202ENST00000378610 B9D2Q9BPU9 175 aa4.25□□□□□ -1.73
CDKAL1-202ENST00000378610 PTPRZ1P23471 2315 aaPredicted RBP4.25□□□□□ -1.73
CDKAL1-202ENST00000378610 HCG22E2RYF7 251 aa4.25□□□□□ -1.73
CDKAL1-202ENST00000378610 WFDC10AQ9H1F0 79 aa4.25□□□□□ -1.73
CDKAL1-202ENST00000378610 C8orf17Q9NRJ1 99 aa4.25□□□□□ -1.73
CDKAL1-202ENST00000378610 IGLV10-54A0A075B6I4 117 aa4.24□□□□□ -1.73
CDKAL1-202ENST00000378610 ANGP03950 147 aaKnown RBP4.24□□□□□ -1.73
CDKAL1-202ENST00000378610 ACACAQ13085 2346 aa4.24□□□□□ -1.73
CDKAL1-202ENST00000378610 LELP1Q5T871 98 aa4.23□□□□□ -1.73
CDKAL1-202ENST00000378610 CDC42SE1Q9NRR8 79 aa4.23□□□□□ -1.73
CDKAL1-202ENST00000378610 TLN1Q9Y490 2541 aaKnown RBP4.23□□□□□ -1.73
CDKAL1-202ENST00000378610 KRTAP1-3Q8IUG1 177 aa4.23□□□□□ -1.73
CDKAL1-202ENST00000378610 XAGE1AQ9HD64 81 aa4.23□□□□□ -1.73
CDKAL1-202ENST00000378610 SPTAN1Q13813 2472 aaKnown RBP4.23□□□□□ -1.73
CDKAL1-202ENST00000378610 IGKV2D-24A0A075B6R9 120 aa4.22□□□□□ -1.73
CDKAL1-202ENST00000378610 DEFB113Q30KQ7 82 aa4.22□□□□□ -1.73
CDKAL1-202ENST00000378610 ZNF469Q96JG9 3925 aaPredicted RBP4.22□□□□□ -1.73
CDKAL1-202ENST00000378610 CAMK2N2Q96S95 79 aa4.22□□□□□ -1.73
CDKAL1-202ENST00000378610 Q6ZRX8 168 aa4.21□□□□□ -1.73
CDKAL1-202ENST00000378610 LINC00208Q96KT6 92 aa4.21□□□□□ -1.73
CDKAL1-202ENST00000378610 ALMS1Q8TCU4 4167 aa4.21□□□□□ -1.74
CDKAL1-202ENST00000378610 DEFB130BP0DP73 79 aa4.21□□□□□ -1.74
CDKAL1-202ENST00000378610 DEFB130AP0DP74 79 aa4.21□□□□□ -1.74
CDKAL1-202ENST00000378610 LINC01554Q52M75 96 aa4.21□□□□□ -1.74
CDKAL1-202ENST00000378610 C1orf137Q5JT78 98 aa4.21□□□□□ -1.74
CDKAL1-202ENST00000378610 C15orf56Q8N910 161 aa4.21□□□□□ -1.74
CDKAL1-202ENST00000378610 WNK1Q9H4A3 2382 aa4.21□□□□□ -1.74
CDKAL1-202ENST00000378610 Q8N1X5 172 aa4.21□□□□□ -1.74
CDKAL1-202ENST00000378610 CNBPP62633 177 aaKnown RBP4.2□□□□□ -1.74
CDKAL1-202ENST00000378610 ADM2Q7Z4H4 148 aa4.2□□□□□ -1.74
CDKAL1-202ENST00000378610 C7orf65Q6ZTY9 151 aa4.2□□□□□ -1.74
CDKAL1-202ENST00000378610 TLX1NBP0CAT3 122 aa4.19□□□□□ -1.74
CDKAL1-202ENST00000378610 LINC01558Q9Y6Z2 57 aa4.19□□□□□ -1.74
CDKAL1-202ENST00000378610 IGLV7-46A0A075B6I9 117 aa4.19□□□□□ -1.74
CDKAL1-202ENST00000378610 CHKB-CPT1BH3BT56 60 aa4.19□□□□□ -1.74
CDKAL1-202ENST00000378610 PRB1P04280 392 aa4.19□□□□□ -1.74
CDKAL1-202ENST00000378610 A0A096LPF7 62 aa4.19□□□□□ -1.74
CDKAL1-202ENST00000378610 HIVEP3Q5T1R4 2406 aa4.19□□□□□ -1.74
CDKAL1-202ENST00000378610 LUZP6Q538Z0 58 aa4.18□□□□□ -1.74
CDKAL1-202ENST00000378610 MOBPQ13875 183 aa4.18□□□□□ -1.74
CDKAL1-202ENST00000378610 IGLV1-50A0A075B6I6 118 aa4.17□□□□□ -1.74
CDKAL1-202ENST00000378610 ASB16-AS1Q495Z4 193 aa4.17□□□□□ -1.74
CDKAL1-202ENST00000378610 FBN2P35556 2912 aa4.17□□□□□ -1.74
CDKAL1-202ENST00000378610 PRR15LQ9BU68 103 aa4.17□□□□□ -1.74
CDKAL1-202ENST00000378610 KRTAP7-1Q8IUC3 87 aa4.16□□□□□ -1.74
CDKAL1-202ENST00000378610 CAMK2N1Q7Z7J9 78 aa4.16□□□□□ -1.74
CDKAL1-202ENST00000378610 COA5Q86WW8 74 aa4.15□□□□□ -1.74
CDKAL1-202ENST00000378610 NOTCH3Q9UM47 2321 aa4.15□□□□□ -1.74
CDKAL1-202ENST00000378610 ITPR1Q14643 2758 aa4.15□□□□□ -1.74
CDKAL1-202ENST00000378610 BAHCC1Q9P281 2608 aa4.15□□□□□ -1.74
CDKAL1-202ENST00000378610 NIPBLQ6KC79 2804 aaeCLIP4.15□□□□□ -1.752e-6■■■■□ 19.3
CDKAL1-202ENST00000378610 AKAP6Q13023 2319 aa4.15□□□□□ -1.75
CDKAL1-202ENST00000378610 Q8NAQ8 132 aa4.15□□□□□ -1.75
CDKAL1-202ENST00000378610 H0Y9P7 68 aa4.15□□□□□ -1.75
CDKAL1-202ENST00000378610 ZANQ9Y493 2812 aa4.15□□□□□ -1.75
CDKAL1-202ENST00000378610 CEP295Q9C0D2 2601 aa4.14□□□□□ -1.75
CDKAL1-202ENST00000378610 H3BNG1 76 aa4.14□□□□□ -1.75
CDKAL1-202ENST00000378610 KRTAP1-1Q07627 177 aa4.14□□□□□ -1.75
CDKAL1-202ENST00000378610 IGFL1Q6UW32 110 aa4.14□□□□□ -1.75
CDKAL1-202ENST00000378610 APCP25054 2843 aa4.14□□□□□ -1.75
CDKAL1-202ENST00000378610 ANK2Q01484 3957 aa4.14□□□□□ -1.75
CDKAL1-202ENST00000378610 SPTBN4Q9H254 2564 aa4.14□□□□□ -1.75
CDKAL1-202ENST00000378610 DEFB105AQ8NG35 78 aa4.13□□□□□ -1.75
CDKAL1-202ENST00000378610 OTOGQ6ZRI0 2925 aa4.13□□□□□ -1.75
CDKAL1-202ENST00000378610 SPTA1P02549 2419 aa4.13□□□□□ -1.75
CDKAL1-202ENST00000378610 MAPK1IP1LQ8NDC0 245 aa4.12□□□□□ -1.75
CDKAL1-202ENST00000378610 UTP20O75691 2785 aaKnown RBP4.12□□□□□ -1.75
CDKAL1-202ENST00000378610 A0A1B0GVX0 72 aa4.12□□□□□ -1.75
CDKAL1-202ENST00000378610 Q6ZR54 194 aa4.12□□□□□ -1.75
CDKAL1-202ENST00000378610 LINC00472Q9H8W2 130 aa4.12□□□□□ -1.75
CDKAL1-202ENST00000378610 A6NED7 52 aa4.12□□□□□ -1.75
CDKAL1-202ENST00000378610 NCOR2Q9Y618 2525 aa4.11□□□□□ -1.75
CDKAL1-202ENST00000378610 GVINP1Q7Z2Y8 2422 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms