RNA–Protein interactions for RNA: ENST00000376861.5

HLA-F-218, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-218ENST00000376861 KIAA1109Q2LD37 5005 aa10.56□□□□□ -0.72
HLA-F-218ENST00000376861 TRAV23DV6A0A075B6W5 121 aa10.55□□□□□ -0.72
HLA-F-218ENST00000376861 RPL28P46779 137 aaKnown RBP10.55□□□□□ -0.72
HLA-F-218ENST00000376861 PSMB2P49721 201 aa10.55□□□□□ -0.72
HLA-F-218ENST00000376861 IGLV1-50A0A075B6I6 118 aa10.54□□□□□ -0.72
HLA-F-218ENST00000376861 RPL37AP8A6NKH3 93 aa10.54□□□□□ -0.72
HLA-F-218ENST00000376861 H3BUT2 72 aa10.54□□□□□ -0.72
HLA-F-218ENST00000376861 DNAH8Q96JB1 4490 aa10.54□□□□□ -0.72
HLA-F-218ENST00000376861 NAA38Q9BRA0 125 aaKnown RBP10.53□□□□□ -0.72
HLA-F-218ENST00000376861 COX6CP09669 75 aa10.53□□□□□ -0.72
HLA-F-218ENST00000376861 C1orf137Q5JT78 98 aa10.53□□□□□ -0.72
HLA-F-218ENST00000376861 LYRM7Q5U5X0 104 aa10.53□□□□□ -0.72
HLA-F-218ENST00000376861 PSORS1C2Q9UIG4 136 aa10.53□□□□□ -0.72
HLA-F-218ENST00000376861 HSPG2P98160 4391 aa10.52□□□□□ -0.73
HLA-F-218ENST00000376861 PRYO14603 147 aa10.52□□□□□ -0.73
HLA-F-218ENST00000376861 TRIAP1O43715 76 aa10.52□□□□□ -0.73
HLA-F-218ENST00000376861 KCNQ1DNQ9H478 68 aa10.52□□□□□ -0.73
HLA-F-218ENST00000376861 A0A1W2PPM0 123 aa10.5□□□□□ -0.73
HLA-F-218ENST00000376861 ZNF73O43830 326 aaPredicted RBP10.5□□□□□ -0.73
HLA-F-218ENST00000376861 DIRC1Q969H9 104 aa10.5□□□□□ -0.73
HLA-F-218ENST00000376861 SCGB1C2P0DMR2 95 aa10.49□□□□□ -0.73
HLA-F-218ENST00000376861 VAMP3Q15836 100 aa10.49□□□□□ -0.73
HLA-F-218ENST00000376861 C6orf99Q4VX62 202 aa10.49□□□□□ -0.73
HLA-F-218ENST00000376861 FABP2P12104 132 aa10.48□□□□□ -0.73
HLA-F-218ENST00000376861 KRTAP17-1Q9BYP8 105 aa10.48□□□□□ -0.73
HLA-F-218ENST00000376861 RYR1P21817 5038 aa10.48□□□□□ -0.73
HLA-F-218ENST00000376861 INAFM2P0DMQ5 153 aa10.47□□□□□ -0.73
HLA-F-218ENST00000376861 REG3GQ6UW15 175 aa10.47□□□□□ -0.73
HLA-F-218ENST00000376861 KRTAP4-5Q9BYR2 181 aa10.47□□□□□ -0.73
HLA-F-218ENST00000376861 TRBV7-6A0A0J9YX20 115 aa10.46□□□□□ -0.74
HLA-F-218ENST00000376861 H0YGX0 51 aa10.46□□□□□ -0.74
HLA-F-218ENST00000376861 SPRR1AP35321 89 aa10.45□□□□□ -0.74
HLA-F-218ENST00000376861 KRTAP11-1Q8IUC1 163 aa10.45□□□□□ -0.74
HLA-F-218ENST00000376861 ETDCA0A1B0GVM5 59 aa10.43□□□□□ -0.74
HLA-F-218ENST00000376861 COX7BP24311 80 aa10.43□□□□□ -0.74
HLA-F-218ENST00000376861 TRBV20-1A0A075B6N2 111 aa10.43□□□□□ -0.74
HLA-F-218ENST00000376861 BCE1O60756 84 aa10.43□□□□□ -0.74
HLA-F-218ENST00000376861 IGLV7-43P04211 117 aa10.43□□□□□ -0.74
HLA-F-218ENST00000376861 UBE2AP49459 152 aa10.43□□□□□ -0.74
HLA-F-218ENST00000376861 KRTAP10-4P60372 401 aaPredicted RBP10.43□□□□□ -0.74
HLA-F-218ENST00000376861 ELOF1P60002 83 aaKnown RBP10.42□□□□□ -0.74
HLA-F-218ENST00000376861 SPCS1Q9Y6A9 102 aa10.42□□□□□ -0.74
HLA-F-218ENST00000376861 KRTAP4-16G5E9R7 235 aaPredicted RBP10.41□□□□□ -0.74
HLA-F-218ENST00000376861 SPINK6Q6UWN8 80 aa10.41□□□□□ -0.74
HLA-F-218ENST00000376861 FAM19A1Q7Z5A9 133 aa10.4□□□□□ -0.74
HLA-F-218ENST00000376861 CLEC2BQ92478 149 aa10.4□□□□□ -0.74
HLA-F-218ENST00000376861 A0A1B0GV90 55 aa10.39□□□□□ -0.75
HLA-F-218ENST00000376861 SNCGO76070 127 aa10.39□□□□□ -0.75
HLA-F-218ENST00000376861 TCL1BO95988 128 aa10.39□□□□□ -0.75
HLA-F-218ENST00000376861 ATXN8Q156A1 80 aa10.39□□□□□ -0.75
HLA-F-218ENST00000376861 B5MCH6 92 aa10.38□□□□□ -0.75
HLA-F-218ENST00000376861 LST1O00453 97 aa10.38□□□□□ -0.75
HLA-F-218ENST00000376861 Q6ZRX8 168 aa10.38□□□□□ -0.75
HLA-F-218ENST00000376861 A0A1B0GX51 115 aa10.38□□□□□ -0.75
HLA-F-218ENST00000376861 K7EP34 96 aa10.38□□□□□ -0.75
HLA-F-218ENST00000376861 SLC25A20O43772 301 aa10.38□□□□□ -0.75
HLA-F-218ENST00000376861 GTF2H5Q6ZYL4 71 aa10.38□□□□□ -0.75
HLA-F-218ENST00000376861 SRRM2Q9UQ35 2752 aaKnown RBP10.37□□□□□ -0.75
HLA-F-218ENST00000376861 ZNF861PO60384 105 aa10.37□□□□□ -0.75
HLA-F-218ENST00000376861 LINC00575Q6W349 94 aa10.37□□□□□ -0.75
HLA-F-218ENST00000376861 HERC2O95714 4834 aa10.37□□□□□ -0.75
HLA-F-218ENST00000376861 FAT1Q14517 4588 aa10.36□□□□□ -0.75
HLA-F-218ENST00000376861 FAM218AQ96MZ4 157 aa10.36□□□□□ -0.75
HLA-F-218ENST00000376861 H0Y9J4 135 aa10.35□□□□□ -0.75
HLA-F-218ENST00000376861 TRACP01848 142 aa10.35□□□□□ -0.75
HLA-F-218ENST00000376861 DHRS4-AS1Q9P1J3 65 aa10.35□□□□□ -0.75
HLA-F-218ENST00000376861 hADV29S1A0JD25 119 aa10.34□□□□□ -0.75
HLA-F-218ENST00000376861 DNAL4O96015 105 aa10.33□□□□□ -0.76
HLA-F-218ENST00000376861 PRLHP81277 87 aa10.33□□□□□ -0.76
HLA-F-218ENST00000376861 H3BMG7 143 aa10.33□□□□□ -0.76
HLA-F-218ENST00000376861 VPS13BQ7Z7G8 4022 aa10.32□□□□□ -0.76
HLA-F-218ENST00000376861 Q9BRP9 147 aa10.31□□□□□ -0.76
HLA-F-218ENST00000376861 HIGD2AQ9BW72 106 aa10.31□□□□□ -0.76
HLA-F-218ENST00000376861 KRTAP13-1Q8IUC0 172 aa10.29□□□□□ -0.76
HLA-F-218ENST00000376861 UBE2V1Q13404 147 aa10.28□□□□□ -0.76
HLA-F-218ENST00000376861 SMCR5Q8TEV8 140 aa10.28□□□□□ -0.76
HLA-F-218ENST00000376861 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.28□□□□□ -0.76
HLA-F-218ENST00000376861 C9JAW5 83 aa10.27□□□□□ -0.77
HLA-F-218ENST00000376861 Q6ZQY7 126 aa10.26□□□□□ -0.77
HLA-F-218ENST00000376861 OXTP01178 125 aa10.25□□□□□ -0.77
HLA-F-218ENST00000376861 GHRHP01286 108 aa10.25□□□□□ -0.77
HLA-F-218ENST00000376861 OCIAD2Q56VL3 154 aa10.25□□□□□ -0.77
HLA-F-218ENST00000376861 ORMDL1Q9P0S3 153 aa10.25□□□□□ -0.77
HLA-F-218ENST00000376861 J3QL48 77 aa10.24□□□□□ -0.77
HLA-F-218ENST00000376861 H3BQ85 93 aa10.23□□□□□ -0.77
HLA-F-218ENST00000376861 ERC2-IT1O76042 136 aa10.23□□□□□ -0.77
HLA-F-218ENST00000376861 H3BT86 120 aa10.22□□□□□ -0.77
HLA-F-218ENST00000376861 ZNF706Q9Y5V0 76 aaPredicted RBP10.22□□□□□ -0.77
HLA-F-218ENST00000376861 F8W1H4 67 aa10.21□□□□□ -0.78
HLA-F-218ENST00000376861 BAALC-AS2P0C853 105 aa10.21□□□□□ -0.78
HLA-F-218ENST00000376861 MTURNQ8N3F0 131 aa10.21□□□□□ -0.78
HLA-F-218ENST00000376861 KRTAP29-1A8MX34 341 aaPredicted RBP10.2□□□□□ -0.78
HLA-F-218ENST00000376861 PRO0461Q9UI25 63 aa10.2□□□□□ -0.78
HLA-F-218ENST00000376861 FLG2Q5D862 2391 aaPredicted RBP10.2□□□□□ -0.78
HLA-F-218ENST00000376861 PCLOQ9Y6V0 5065 aa10.19□□□□□ -0.78
HLA-F-218ENST00000376861 TMEM256-PLSCR3K7ERE1 68 aa10.19□□□□□ -0.78
HLA-F-218ENST00000376861 PPDPFLQ8WWR9 84 aa10.19□□□□□ -0.78
HLA-F-218ENST00000376861 ANKRD29Q8N6D5 301 aa10.18□□□□□ -0.78
HLA-F-218ENST00000376861 ST20-AS1Q8NBB2 130 aa10.18□□□□□ -0.78
HLA-F-218ENST00000376861 LINC01600Q96MT4 127 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms