RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 TMEM254Q8TBM7 123 aa5.52□□□□□ -1.53
UBR4-202ENST00000375224 LINC01556Q5JQF7 62 aa5.52□□□□□ -1.53
UBR4-202ENST00000375224 UNQ6190/PRO20217Q6UXQ8 127 aa5.51□□□□□ -1.53
UBR4-202ENST00000375224 VPREB1P12018 145 aa5.51□□□□□ -1.53
UBR4-202ENST00000375224 C9orf129Q5T035 196 aaKnown RBP5.51□□□□□ -1.53
UBR4-202ENST00000375224 STAB1Q9NY15 2570 aa5.5□□□□□ -1.53
UBR4-202ENST00000375224 A0A087WYN8 130 aa5.5□□□□□ -1.53
UBR4-202ENST00000375224 M0R378 163 aa5.5□□□□□ -1.53
UBR4-202ENST00000375224 C9orf116Q5BN46 136 aaPredicted RBP5.5□□□□□ -1.53
UBR4-202ENST00000375224 PRYO14603 147 aa5.49□□□□□ -1.53
UBR4-202ENST00000375224 SLPIP03973 132 aa5.49□□□□□ -1.53
UBR4-202ENST00000375224 NREPQ16612 68 aa5.49□□□□□ -1.53
UBR4-202ENST00000375224 C10orf25Q5T742 122 aa5.49□□□□□ -1.53
UBR4-202ENST00000375224 Q6ZVQ6 151 aa5.49□□□□□ -1.53
UBR4-202ENST00000375224 K7EIL1 84 aa5.49□□□□□ -1.53
UBR4-202ENST00000375224 ZNF73O43830 326 aaPredicted RBP5.49□□□□□ -1.53
UBR4-202ENST00000375224 DNAH10OSP0CZ25 163 aa5.48□□□□□ -1.53
UBR4-202ENST00000375224 KRTAP26-1Q6PEX3 210 aa5.48□□□□□ -1.53
UBR4-202ENST00000375224 OBSCN-AS1Q96MR7 158 aa5.48□□□□□ -1.53
UBR4-202ENST00000375224 CMYA5Q8N3K9 4069 aa5.48□□□□□ -1.53
UBR4-202ENST00000375224 CAMK2N2Q96S95 79 aa5.48□□□□□ -1.53
UBR4-202ENST00000375224 Q1T7F1 81 aa5.47□□□□□ -1.53
UBR4-202ENST00000375224 C6orf48Q9UBA6 75 aa5.47□□□□□ -1.53
UBR4-202ENST00000375224 FBN1P35555 2871 aaKnown RBP5.47□□□□□ -1.53
UBR4-202ENST00000375224 DNAH3Q8TD57 4116 aa5.47□□□□□ -1.53
UBR4-202ENST00000375224 IGKV2D-24A0A075B6R9 120 aa5.46□□□□□ -1.53
UBR4-202ENST00000375224 C8orf87E5RJ46 101 aa5.46□□□□□ -1.53
UBR4-202ENST00000375224 UBE2AP49459 152 aa5.46□□□□□ -1.53
UBR4-202ENST00000375224 PRB2P02812 416 aaPredicted RBP5.46□□□□□ -1.54
UBR4-202ENST00000375224 PRR3P79522 188 aaKnown RBP5.46□□□□□ -1.54
UBR4-202ENST00000375224 LINC01547P58512 204 aaPredicted RBP5.46□□□□□ -1.54
UBR4-202ENST00000375224 LINC00588Q9Y4M8 146 aa5.46□□□□□ -1.54
UBR4-202ENST00000375224 CHKB-CPT1BH3BT56 60 aa5.45□□□□□ -1.54
UBR4-202ENST00000375224 HIGD2BQ4VC39 106 aa5.45□□□□□ -1.54
UBR4-202ENST00000375224 TRBV7-4A0A0J9YYF1 115 aa5.45□□□□□ -1.54
UBR4-202ENST00000375224 C15orf56Q8N910 161 aa5.45□□□□□ -1.54
UBR4-202ENST00000375224 TRAV22A0A0B4J277 110 aa5.44□□□□□ -1.54
UBR4-202ENST00000375224 LINC00167Q96N53 147 aa5.44□□□□□ -1.54
UBR4-202ENST00000375224 BPY2O14599 106 aa5.44□□□□□ -1.54
UBR4-202ENST00000375224 IGLV6-57P01721 117 aa5.44□□□□□ -1.54
UBR4-202ENST00000375224 COL6A5A8TX70 2615 aa5.44□□□□□ -1.54
UBR4-202ENST00000375224 ERC2-IT1O76042 136 aa5.43□□□□□ -1.54
UBR4-202ENST00000375224 Q6ZRP5 223 aa5.43□□□□□ -1.54
UBR4-202ENST00000375224 Q8N814 137 aa5.43□□□□□ -1.54
UBR4-202ENST00000375224 C6orf99Q4VX62 202 aa5.43□□□□□ -1.54
UBR4-202ENST00000375224 SYCNQ0VAF6 134 aa5.43□□□□□ -1.54
UBR4-202ENST00000375224 hDV103S1A0JD37 113 aa5.42□□□□□ -1.54
UBR4-202ENST00000375224 A8MUN3 132 aa5.42□□□□□ -1.54
UBR4-202ENST00000375224 H3BQ85 93 aa5.42□□□□□ -1.54
UBR4-202ENST00000375224 Q8NDZ9 215 aa5.42□□□□□ -1.54
UBR4-202ENST00000375224 PKD1L1Q8TDX9 2849 aa5.42□□□□□ -1.54
UBR4-202ENST00000375224 CXCL6P80162 114 aa5.42□□□□□ -1.54
UBR4-202ENST00000375224 LCA10Q71F78 164 aa5.42□□□□□ -1.54
UBR4-202ENST00000375224 XAGE1AQ9HD64 81 aa5.42□□□□□ -1.54
UBR4-202ENST00000375224 LINC00575Q6W349 94 aa5.41□□□□□ -1.54
UBR4-202ENST00000375224 ATP11AUNQ6ZP68 121 aa5.41□□□□□ -1.54
UBR4-202ENST00000375224 TENM3Q9P273 2699 aa5.41□□□□□ -1.54
UBR4-202ENST00000375224 C7orf65Q6ZTY9 151 aa5.4□□□□□ -1.54
UBR4-202ENST00000375224 SCXQ7RTU7 201 aa5.4□□□□□ -1.54
UBR4-202ENST00000375224 NKAPP1Q8N9T2 125 aa5.4□□□□□ -1.54
UBR4-202ENST00000375224 DIRC1Q969H9 104 aa5.4□□□□□ -1.54
UBR4-202ENST00000375224 HCG22E2RYF7 251 aa5.4□□□□□ -1.55
UBR4-202ENST00000375224 ANK2Q01484 3957 aa5.4□□□□□ -1.55
UBR4-202ENST00000375224 NOTCH1P46531 2555 aa5.4□□□□□ -1.55
UBR4-202ENST00000375224 C1orf64Q8NEQ6 169 aa5.39□□□□□ -1.55
UBR4-202ENST00000375224 HIGD2AQ9BW72 106 aa5.39□□□□□ -1.55
UBR4-202ENST00000375224 TLX1NBP0CAT3 122 aa5.39□□□□□ -1.55
UBR4-202ENST00000375224 A6NED7 52 aa5.39□□□□□ -1.55
UBR4-202ENST00000375224 MDFIQ99750 246 aa5.39□□□□□ -1.55
UBR4-202ENST00000375224 PHF5AQ7RTV0 110 aaKnown RBP5.38□□□□□ -1.55
UBR4-202ENST00000375224 B9D2Q9BPU9 175 aa5.38□□□□□ -1.55
UBR4-202ENST00000375224 COX7BP24311 80 aa5.38□□□□□ -1.55
UBR4-202ENST00000375224 PRR26Q8N8Z3 221 aa5.38□□□□□ -1.55
UBR4-202ENST00000375224 PDE6GP18545 87 aa5.37□□□□□ -1.55
UBR4-202ENST00000375224 SERTAD4-AS1Q5TG53 156 aa5.37□□□□□ -1.55
UBR4-202ENST00000375224 PLA2G2DQ9UNK4 145 aa5.37□□□□□ -1.55
UBR4-202ENST00000375224 ELOF1P60002 83 aaKnown RBP5.36□□□□□ -1.55
UBR4-202ENST00000375224 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.36□□□□□ -1.55
UBR4-202ENST00000375224 C16orf90A8MZG2 172 aa5.36□□□□□ -1.55
UBR4-202ENST00000375224 UBE2DNLQ8IWF7 75 aa5.35□□□□□ -1.55
UBR4-202ENST00000375224 PRR15LQ9BU68 103 aa5.35□□□□□ -1.55
UBR4-202ENST00000375224 A8MU10 97 aa5.35□□□□□ -1.55
UBR4-202ENST00000375224 PRR4Q16378 134 aa5.35□□□□□ -1.55
UBR4-202ENST00000375224 Q6ZQT0 140 aa5.35□□□□□ -1.55
UBR4-202ENST00000375224 LIMD2Q9BT23 127 aa5.35□□□□□ -1.55
UBR4-202ENST00000375224 NBEAL1Q6ZS30 2694 aa5.34□□□□□ -1.55
UBR4-202ENST00000375224 HUWE1Q7Z6Z7 4374 aaKnown RBP5.34□□□□□ -1.55
UBR4-202ENST00000375224 APLNQ9ULZ1 77 aa5.34□□□□□ -1.55
UBR4-202ENST00000375224 Q6ZQY7 126 aa5.33□□□□□ -1.56
UBR4-202ENST00000375224 MGAM2Q2M2H8 2515 aa5.33□□□□□ -1.56
UBR4-202ENST00000375224 IGLV5-37A0A075B6J1 123 aa5.33□□□□□ -1.56
UBR4-202ENST00000375224 PSCAO43653 123 aa5.33□□□□□ -1.56
UBR4-202ENST00000375224 KCNQ1DNQ9H478 68 aa5.33□□□□□ -1.56
UBR4-202ENST00000375224 CASC10Q5T4H9 136 aa5.32□□□□□ -1.56
UBR4-202ENST00000375224 Q5VV11 94 aa5.32□□□□□ -1.56
UBR4-202ENST00000375224 C14orf177Q52M58 125 aa5.32□□□□□ -1.56
UBR4-202ENST00000375224 LOC110117498A0A087WWA1 95 aa5.32□□□□□ -1.56
UBR4-202ENST00000375224 NUPR2A6NF83 97 aa5.32□□□□□ -1.56
UBR4-202ENST00000375224 LINC00528Q8N1L1 170 aa5.32□□□□□ -1.56
UBR4-202ENST00000375224 C7orf33Q8WU49 177 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms