RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 Q6ZQY7 126 aa11.61□□□□□ -0.55
LDLRAP1-201ENST00000374338 Q8NAQ8 132 aa11.61□□□□□ -0.55
LDLRAP1-201ENST00000374338 OCR1Q9BZK8 76 aa11.61□□□□□ -0.55
LDLRAP1-201ENST00000374338 BAHCC1Q9P281 2608 aa11.6□□□□□ -0.55
LDLRAP1-201ENST00000374338 LRCOL1A6NCL2 159 aa11.59□□□□□ -0.55
LDLRAP1-201ENST00000374338 HIGD2AQ9BW72 106 aa11.59□□□□□ -0.55
LDLRAP1-201ENST00000374338 CD164L2Q6UWJ8 174 aa11.59□□□□□ -0.55
LDLRAP1-201ENST00000374338 UNQ6190/PRO20217Q6UXQ8 127 aa11.59□□□□□ -0.55
LDLRAP1-201ENST00000374338 PRB2P02812 416 aaPredicted RBP11.58□□□□□ -0.56
LDLRAP1-201ENST00000374338 Q8IZM0 81 aa11.58□□□□□ -0.56
LDLRAP1-201ENST00000374338 APOC4P55056 127 aa11.58□□□□□ -0.56
LDLRAP1-201ENST00000374338 Q6ZRP5 223 aa11.58□□□□□ -0.56
LDLRAP1-201ENST00000374338 hDV103S1A0JD37 113 aa11.57□□□□□ -0.56
LDLRAP1-201ENST00000374338 LYRM9A8MSI8 78 aa11.57□□□□□ -0.56
LDLRAP1-201ENST00000374338 A0A1B0GUV1 79 aa11.56□□□□□ -0.56
LDLRAP1-201ENST00000374338 MGAM2Q2M2H8 2515 aa11.56□□□□□ -0.56
LDLRAP1-201ENST00000374338 CSMD3Q7Z407 3707 aa11.56□□□□□ -0.56
LDLRAP1-201ENST00000374338 KIAA0087Q14695 138 aa11.56□□□□□ -0.56
LDLRAP1-201ENST00000374338 Q1T7F1 81 aa11.56□□□□□ -0.56
LDLRAP1-201ENST00000374338 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.56□□□□□ -0.56
LDLRAP1-201ENST00000374338 SPART-AS1P0CW21 52 aa11.54□□□□□ -0.56
LDLRAP1-201ENST00000374338 IGKV4-1P06312 121 aa11.54□□□□□ -0.56
LDLRAP1-201ENST00000374338 KRTAP10-11P60412 298 aa11.53□□□□□ -0.56
LDLRAP1-201ENST00000374338 XAGE1AQ9HD64 81 aa11.53□□□□□ -0.56
LDLRAP1-201ENST00000374338 CD164Q04900 197 aa11.53□□□□□ -0.56
LDLRAP1-201ENST00000374338 HIGD2BQ4VC39 106 aa11.53□□□□□ -0.56
LDLRAP1-201ENST00000374338 WFDC10BQ8IUB3 73 aa11.52□□□□□ -0.57
LDLRAP1-201ENST00000374338 CMYA5Q8N3K9 4069 aa11.52□□□□□ -0.57
LDLRAP1-201ENST00000374338 PSPHP1O15172 72 aa11.51□□□□□ -0.57
LDLRAP1-201ENST00000374338 COX17Q14061 63 aa11.51□□□□□ -0.57
LDLRAP1-201ENST00000374338 SPAG11BQ08648 103 aa11.5□□□□□ -0.57
LDLRAP1-201ENST00000374338 CYSRT1A8MQ03 144 aa11.49□□□□□ -0.57
LDLRAP1-201ENST00000374338 C1orf64Q8NEQ6 169 aa11.49□□□□□ -0.57
LDLRAP1-201ENST00000374338 LYSTQ99698 3801 aa11.49□□□□□ -0.57
LDLRAP1-201ENST00000374338 H3BQ85 93 aa11.48□□□□□ -0.57
LDLRAP1-201ENST00000374338 TENM2Q9NT68 2774 aa11.47□□□□□ -0.57
LDLRAP1-201ENST00000374338 TRAV22A0A0B4J277 110 aa11.46□□□□□ -0.58
LDLRAP1-201ENST00000374338 IGLV6-57P01721 117 aa11.45□□□□□ -0.58
LDLRAP1-201ENST00000374338 COX7BP24311 80 aa11.44□□□□□ -0.58
LDLRAP1-201ENST00000374338 KPRPQ5T749 579 aaPredicted RBP11.44□□□□□ -0.58
LDLRAP1-201ENST00000374338 LELP1Q5T871 98 aa11.43□□□□□ -0.58
LDLRAP1-201ENST00000374338 KRTAP24-1Q3LI83 254 aa11.42□□□□□ -0.58
LDLRAP1-201ENST00000374338 FAM30AQ9NZY2 134 aa11.42□□□□□ -0.58
LDLRAP1-201ENST00000374338 A0A0J9YWU9 116 aa11.42□□□□□ -0.58
LDLRAP1-201ENST00000374338 A8MU10 97 aa11.42□□□□□ -0.58
LDLRAP1-201ENST00000374338 C3orf84H3BNL1 204 aa11.41□□□□□ -0.58
LDLRAP1-201ENST00000374338 STAB2Q8WWQ8 2551 aa11.39□□□□□ -0.59
LDLRAP1-201ENST00000374338 C6orf48Q9UBA6 75 aa11.39□□□□□ -0.59
LDLRAP1-201ENST00000374338 SMIM29Q86T20 159 aa11.38□□□□□ -0.59
LDLRAP1-201ENST00000374338 DIRC1Q969H9 104 aa11.38□□□□□ -0.59
LDLRAP1-201ENST00000374338 LCE6AA0A183 80 aa11.37□□□□□ -0.59
LDLRAP1-201ENST00000374338 A8MUN3 132 aa11.37□□□□□ -0.59
LDLRAP1-201ENST00000374338 SYCNQ0VAF6 134 aa11.36□□□□□ -0.59
LDLRAP1-201ENST00000374338 COL7A1Q02388 2944 aa11.35□□□□□ -0.59
LDLRAP1-201ENST00000374338 ZNF73O43830 326 aaPredicted RBP11.35□□□□□ -0.59
LDLRAP1-201ENST00000374338 MRPL55Q7Z7F7 128 aaKnown RBP11.34□□□□□ -0.59
LDLRAP1-201ENST00000374338 ZCCHC13Q8WW36 166 aaKnown RBP11.34□□□□□ -0.59
LDLRAP1-201ENST00000374338 PRR34Q9NV39 138 aa11.34□□□□□ -0.59
LDLRAP1-201ENST00000374338 IGKV2D-24A0A075B6R9 120 aa11.34□□□□□ -0.59
LDLRAP1-201ENST00000374338 CAMK2N2Q96S95 79 aa11.34□□□□□ -0.59
LDLRAP1-201ENST00000374338 PSCAO43653 123 aa11.33□□□□□ -0.6
LDLRAP1-201ENST00000374338 PRR4Q16378 134 aa11.32□□□□□ -0.6
LDLRAP1-201ENST00000374338 DEFB105AQ8NG35 78 aa11.32□□□□□ -0.6
LDLRAP1-201ENST00000374338 DEFB131BA0A096LNP1 70 aa11.31□□□□□ -0.6
LDLRAP1-201ENST00000374338 ELOF1P60002 83 aaKnown RBP11.31□□□□□ -0.6
LDLRAP1-201ENST00000374338 DNAH10Q8IVF4 4471 aa11.3□□□□□ -0.6
LDLRAP1-201ENST00000374338 RBM12B-AS1Q9P1G2 102 aa11.3□□□□□ -0.6
LDLRAP1-201ENST00000374338 CYP4F30PQ9H0H9 118 aa11.3□□□□□ -0.6
LDLRAP1-201ENST00000374338 Q5VV11 94 aa11.29□□□□□ -0.6
LDLRAP1-201ENST00000374338 LINC00588Q9Y4M8 146 aa11.29□□□□□ -0.6
LDLRAP1-201ENST00000374338 KTN1-AS1Q86SY8 53 aa11.28□□□□□ -0.6
LDLRAP1-201ENST00000374338 C11orf45Q8TAV5 145 aa11.28□□□□□ -0.6
LDLRAP1-201ENST00000374338 UBE2BP63146 152 aa11.27□□□□□ -0.61
LDLRAP1-201ENST00000374338 CASC10Q5T4H9 136 aa11.27□□□□□ -0.61
LDLRAP1-201ENST00000374338 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.26□□□□□ -0.61
LDLRAP1-201ENST00000374338 C15orf56Q8N910 161 aa11.26□□□□□ -0.61
LDLRAP1-201ENST00000374338 SRRM2Q9UQ35 2752 aaKnown RBP11.24□□□□□ -0.61
LDLRAP1-201ENST00000374338 ETDCA0A1B0GVM5 59 aa11.23□□□□□ -0.61
LDLRAP1-201ENST00000374338 C16orf90A8MZG2 172 aa11.23□□□□□ -0.61
LDLRAP1-201ENST00000374338 HUWE1Q7Z6Z7 4374 aaKnown RBP11.23□□□□□ -0.61
LDLRAP1-201ENST00000374338 KRTAP26-1Q6PEX3 210 aa11.23□□□□□ -0.61
LDLRAP1-201ENST00000374338 ST20-AS1Q8NBB2 130 aa11.22□□□□□ -0.61
LDLRAP1-201ENST00000374338 CHKB-CPT1BH3BT56 60 aa11.2□□□□□ -0.62
LDLRAP1-201ENST00000374338 M0R378 163 aa11.2□□□□□ -0.62
LDLRAP1-201ENST00000374338 LINC00528Q8N1L1 170 aa11.2□□□□□ -0.62
LDLRAP1-201ENST00000374338 UBE2AP49459 152 aa11.19□□□□□ -0.62
LDLRAP1-201ENST00000374338 DNAH3Q8TD57 4116 aa11.19□□□□□ -0.62
LDLRAP1-201ENST00000374338 FAM168BA1KXE4 195 aa11.19□□□□□ -0.62
LDLRAP1-201ENST00000374338 VPREB1P12018 145 aa11.19□□□□□ -0.62
LDLRAP1-201ENST00000374338 RPL37AP8A6NKH3 93 aa11.18□□□□□ -0.62
LDLRAP1-201ENST00000374338 SPTSSBQ8NFR3 76 aa11.18□□□□□ -0.62
LDLRAP1-201ENST00000374338 SERTAD4-AS1Q5TG53 156 aa11.16□□□□□ -0.62
LDLRAP1-201ENST00000374338 Q8N9P0 234 aaPredicted RBP11.15□□□□□ -0.62
LDLRAP1-201ENST00000374338 DNAH7Q8WXX0 4024 aa11.15□□□□□ -0.62
LDLRAP1-201ENST00000374338 HCG22E2RYF7 251 aa11.15□□□□□ -0.63
LDLRAP1-201ENST00000374338 EGFEM1PQ0D2K5 195 aa11.15□□□□□ -0.63
LDLRAP1-201ENST00000374338 A0A0G2JQZ4 141 aa11.14□□□□□ -0.63
LDLRAP1-201ENST00000374338 A0A1W2PNN7 141 aa11.14□□□□□ -0.63
LDLRAP1-201ENST00000374338 GVQW2A0A096LPI5 108 aaPredicted RBP11.13□□□□□ -0.63
LDLRAP1-201ENST00000374338 DSCR10P59022 87 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms