RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 Q8N814 137 aa6.89□□□□□ -1.31
COL5A1-202ENST00000371820 Q9HAA7 133 aa6.89□□□□□ -1.31
COL5A1-202ENST00000371820 TRBV10-3A0A0K0K1G6 114 aa6.88□□□□□ -1.31
COL5A1-202ENST00000371820 LINC00269Q8N2A0 174 aa6.88□□□□□ -1.31
COL5A1-202ENST00000371820 C3orf22Q8N5N4 141 aa6.88□□□□□ -1.31
COL5A1-202ENST00000371820 A0A087WYN8 130 aa6.87□□□□□ -1.31
COL5A1-202ENST00000371820 BCE1O60756 84 aa6.87□□□□□ -1.31
COL5A1-202ENST00000371820 C22orf24Q9Y442 160 aa6.87□□□□□ -1.31
COL5A1-202ENST00000371820 TRBV7-6A0A0J9YX20 115 aa6.86□□□□□ -1.31
COL5A1-202ENST00000371820 FAM236AA0A1B0GUQ0 79 aa6.86□□□□□ -1.31
COL5A1-202ENST00000371820 FAM236BA0A1B0GV22 79 aa6.86□□□□□ -1.31
COL5A1-202ENST00000371820 RMI2Q96E14 147 aa6.86□□□□□ -1.31
COL5A1-202ENST00000371820 COX7CP15954 63 aa6.85□□□□□ -1.31
COL5A1-202ENST00000371820 LINC00526Q96FQ7 95 aa6.85□□□□□ -1.31
COL5A1-202ENST00000371820 UBL5Q9BZL1 73 aa6.85□□□□□ -1.31
COL5A1-202ENST00000371820 PRR34Q9NV39 138 aa6.85□□□□□ -1.31
COL5A1-202ENST00000371820 HERC1Q15751 4861 aa6.84□□□□□ -1.31
COL5A1-202ENST00000371820 hADV29S1A0JD25 119 aa6.84□□□□□ -1.31
COL5A1-202ENST00000371820 CCDC179H3BU77 68 aa6.84□□□□□ -1.31
COL5A1-202ENST00000371820 SPAG11BQ08648 103 aa6.84□□□□□ -1.31
COL5A1-202ENST00000371820 IGLV5-52A0A0A0MRZ9 124 aa6.83□□□□□ -1.32
COL5A1-202ENST00000371820 RBM3P98179 157 aaKnown RBP6.83□□□□□ -1.32
COL5A1-202ENST00000371820 RPL18AQ02543 176 aaKnown RBP6.83□□□□□ -1.32
COL5A1-202ENST00000371820 LINC00575Q6W349 94 aa6.83□□□□□ -1.32
COL5A1-202ENST00000371820 C14orf132Q9NPU4 83 aa6.83□□□□□ -1.32
COL5A1-202ENST00000371820 FAT1Q14517 4588 aa6.82□□□□□ -1.32
COL5A1-202ENST00000371820 LRCOL1A6NCL2 159 aa6.82□□□□□ -1.32
COL5A1-202ENST00000371820 ZNF561-AS1K7EIQ3 104 aa6.82□□□□□ -1.32
COL5A1-202ENST00000371820 HIST1H4AP62805 103 aaKnown RBP6.82□□□□□ -1.32
COL5A1-202ENST00000371820 C9orf153Q5TBE3 101 aa6.82□□□□□ -1.32
COL5A1-202ENST00000371820 SMCR5Q8TEV8 140 aa6.82□□□□□ -1.32
COL5A1-202ENST00000371820 LOC110117498A0A087WWA1 95 aa6.81□□□□□ -1.32
COL5A1-202ENST00000371820 EPM2AB3EWF7 344 aa6.81□□□□□ -1.32
COL5A1-202ENST00000371820 CRYGAP11844 174 aa6.81□□□□□ -1.32
COL5A1-202ENST00000371820 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.81□□□□□ -1.32
COL5A1-202ENST00000371820 SMIM20Q8N5G0 67 aa6.81□□□□□ -1.32
COL5A1-202ENST00000371820 C2orf48Q96LS8 159 aa6.81□□□□□ -1.32
COL5A1-202ENST00000371820 KLK12Q9UKR0 248 aa6.81□□□□□ -1.32
COL5A1-202ENST00000371820 IGKV2D-24A0A075B6R9 120 aa6.8□□□□□ -1.32
COL5A1-202ENST00000371820 IGLV6-57P01721 117 aa6.8□□□□□ -1.32
COL5A1-202ENST00000371820 FUSP35637 526 aaKnown RBP eCLIP6.8□□□□□ -1.32
COL5A1-202ENST00000371820 C6orf99Q4VX62 202 aa6.8□□□□□ -1.32
COL5A1-202ENST00000371820 Q8N3U1 123 aa6.8□□□□□ -1.32
COL5A1-202ENST00000371820 DSCR8Q96T75 97 aa6.8□□□□□ -1.32
COL5A1-202ENST00000371820 SS18L2Q9UHA2 77 aa6.8□□□□□ -1.32
COL5A1-202ENST00000371820 DMBT1Q9UGM3 2413 aaPredicted RBP6.79□□□□□ -1.32
COL5A1-202ENST00000371820 NCR3O14931 201 aa6.79□□□□□ -1.32
COL5A1-202ENST00000371820 CLPSL2Q6UWE3 100 aa6.79□□□□□ -1.32
COL5A1-202ENST00000371820 SERP2Q8N6R1 65 aa6.79□□□□□ -1.32
COL5A1-202ENST00000371820 DIRC1Q969H9 104 aa6.79□□□□□ -1.32
COL5A1-202ENST00000371820 LINC00846Q9NV44 126 aa6.79□□□□□ -1.32
COL5A1-202ENST00000371820 RPS28P62857 69 aaKnown RBP6.78□□□□□ -1.32
COL5A1-202ENST00000371820 C1orf43Q9BWL3 253 aa6.78□□□□□ -1.32
COL5A1-202ENST00000371820 IGLV10-54A0A075B6I4 117 aa6.77□□□□□ -1.33
COL5A1-202ENST00000371820 M0R378 163 aa6.77□□□□□ -1.33
COL5A1-202ENST00000371820 SLPIP03973 132 aa6.77□□□□□ -1.33
COL5A1-202ENST00000371820 KRTAP10-1P60331 282 aa6.77□□□□□ -1.33
COL5A1-202ENST00000371820 C14orf177Q52M58 125 aa6.77□□□□□ -1.33
COL5A1-202ENST00000371820 Q5VSD8 79 aa6.77□□□□□ -1.33
COL5A1-202ENST00000371820 UNQ6190/PRO20217Q6UXQ8 127 aa6.77□□□□□ -1.33
COL5A1-202ENST00000371820 LAMTOR3Q9UHA4 124 aa6.77□□□□□ -1.33
COL5A1-202ENST00000371820 VPS13BQ7Z7G8 4022 aa6.76□□□□□ -1.33
COL5A1-202ENST00000371820 A0A1B0GW54 56 aa6.76□□□□□ -1.33
COL5A1-202ENST00000371820 COX7BP24311 80 aa6.76□□□□□ -1.33
COL5A1-202ENST00000371820 ENHOQ6UWT2 76 aa6.76□□□□□ -1.33
COL5A1-202ENST00000371820 MYCBP2O75592 4640 aa6.75□□□□□ -1.33
COL5A1-202ENST00000371820 TRAV23DV6A0A075B6W5 121 aa6.75□□□□□ -1.33
COL5A1-202ENST00000371820 NDUFC2-KCTD14E9PQ53 114 aa6.75□□□□□ -1.33
COL5A1-202ENST00000371820 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.74□□□□□ -1.33
COL5A1-202ENST00000371820 IGKV3D-7A0A0C4DH55 119 aa6.74□□□□□ -1.33
COL5A1-202ENST00000371820 CXCL6P80162 114 aa6.74□□□□□ -1.33
COL5A1-202ENST00000371820 CAMK2N2Q96S95 79 aa6.74□□□□□ -1.33
COL5A1-202ENST00000371820 USP17L23D6RBM5 183 aa6.73□□□□□ -1.33
COL5A1-202ENST00000371820 TMEM258P61165 79 aa6.73□□□□□ -1.33
COL5A1-202ENST00000371820 PRR3P79522 188 aaKnown RBP6.73□□□□□ -1.33
COL5A1-202ENST00000371820 Q6ZQT0 140 aa6.73□□□□□ -1.33
COL5A1-202ENST00000371820 FAM229AH3BQW9 127 aa6.72□□□□□ -1.33
COL5A1-202ENST00000371820 ZNF73O43830 326 aaPredicted RBP6.72□□□□□ -1.33
COL5A1-202ENST00000371820 C9orf116Q5BN46 136 aaPredicted RBP6.72□□□□□ -1.33
COL5A1-202ENST00000371820 FLG2Q5D862 2391 aaPredicted RBP6.72□□□□□ -1.33
COL5A1-202ENST00000371820 LOC107984640A0A0U1RRK4 108 aa6.71□□□□□ -1.34
COL5A1-202ENST00000371820 ELOF1P60002 83 aaKnown RBP6.71□□□□□ -1.34
COL5A1-202ENST00000371820 C9orf129Q5T035 196 aaKnown RBP6.71□□□□□ -1.34
COL5A1-202ENST00000371820 C10orf25Q5T742 122 aa6.71□□□□□ -1.34
COL5A1-202ENST00000371820 C6orf48Q9UBA6 75 aa6.71□□□□□ -1.34
COL5A1-202ENST00000371820 DNAH8Q96JB1 4490 aa6.7□□□□□ -1.34
COL5A1-202ENST00000371820 SMR3BP02814 79 aaPredicted RBP6.7□□□□□ -1.34
COL5A1-202ENST00000371820 PLA2G2DQ9UNK4 145 aa6.7□□□□□ -1.34
COL5A1-202ENST00000371820 SRRM2Q9UQ35 2752 aaKnown RBP6.69□□□□□ -1.34
COL5A1-202ENST00000371820 J3KT08 172 aa6.69□□□□□ -1.34
COL5A1-202ENST00000371820 HAMPP81172 84 aa6.69□□□□□ -1.34
COL5A1-202ENST00000371820 Q6ZQY7 126 aa6.69□□□□□ -1.34
COL5A1-202ENST00000371820 Q6ZSA8 131 aa6.69□□□□□ -1.34
COL5A1-202ENST00000371820 TRAV7A0A075B6U4 112 aa6.68□□□□□ -1.34
COL5A1-202ENST00000371820 TLX1NBP0CAT3 122 aa6.68□□□□□ -1.34
COL5A1-202ENST00000371820 VPREB1P12018 145 aa6.68□□□□□ -1.34
COL5A1-202ENST00000371820 TRBV7-4A0A0J9YYF1 115 aa6.67□□□□□ -1.34
COL5A1-202ENST00000371820 PLA2G1BP04054 148 aaKnown RBP6.67□□□□□ -1.34
COL5A1-202ENST00000371820 SYCNQ0VAF6 134 aa6.67□□□□□ -1.34
COL5A1-202ENST00000371820 FAM30AQ9NZY2 134 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms