RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 LINC00588Q9Y4M8 146 aa4.68□□□□□ -1.66
CSDE1-204ENST00000369530 PIK3CD-AS1Q5SR53 167 aa4.68□□□□□ -1.66
CSDE1-204ENST00000369530 RBM12B-AS1Q9P1G2 102 aa4.68□□□□□ -1.66
CSDE1-204ENST00000369530 RPL36AP83881 106 aaKnown RBP4.67□□□□□ -1.66
CSDE1-204ENST00000369530 RPL36ALQ969Q0 106 aaKnown RBP4.67□□□□□ -1.66
CSDE1-204ENST00000369530 MRPL55Q7Z7F7 128 aaKnown RBP4.67□□□□□ -1.66
CSDE1-204ENST00000369530 Q9HAA7 133 aa4.67□□□□□ -1.66
CSDE1-204ENST00000369530 APLNQ9ULZ1 77 aa4.67□□□□□ -1.66
CSDE1-204ENST00000369530 IGKV2-28A0A075B6P5 120 aa4.67□□□□□ -1.66
CSDE1-204ENST00000369530 UBE2L6O14933 153 aa4.67□□□□□ -1.66
CSDE1-204ENST00000369530 IGKV2D-28P01615 120 aa4.67□□□□□ -1.66
CSDE1-204ENST00000369530 Q6ZR54 194 aa4.67□□□□□ -1.66
CSDE1-204ENST00000369530 MIR7-3HGQ8N6C7 128 aa4.67□□□□□ -1.66
CSDE1-204ENST00000369530 ORMDL1Q9P0S3 153 aa4.67□□□□□ -1.66
CSDE1-204ENST00000369530 HMCN2Q8NDA2 5059 aa4.67□□□□□ -1.66
CSDE1-204ENST00000369530 A0A096LPF7 62 aa4.66□□□□□ -1.66
CSDE1-204ENST00000369530 C11orf72Q8NBR9 251 aa4.66□□□□□ -1.66
CSDE1-204ENST00000369530 DEFB135Q30KP9 77 aa4.66□□□□□ -1.66
CSDE1-204ENST00000369530 Q6ZRP5 223 aa4.66□□□□□ -1.66
CSDE1-204ENST00000369530 UBL5Q9BZL1 73 aa4.66□□□□□ -1.66
CSDE1-204ENST00000369530 TRAV10A0A0B4J240 114 aa4.66□□□□□ -1.66
CSDE1-204ENST00000369530 Q6ZSN1 163 aa4.65□□□□□ -1.66
CSDE1-204ENST00000369530 NDUFS5O43920 106 aa4.65□□□□□ -1.66
CSDE1-204ENST00000369530 LINC00337Q8N6G1 96 aa4.65□□□□□ -1.66
CSDE1-204ENST00000369530 TMEM254Q8TBM7 123 aa4.65□□□□□ -1.66
CSDE1-204ENST00000369530 MUC17Q685J3 4493 aa4.65□□□□□ -1.67
CSDE1-204ENST00000369530 NCR3O14931 201 aa4.65□□□□□ -1.67
CSDE1-204ENST00000369530 LINC01547P58512 204 aaPredicted RBP4.65□□□□□ -1.67
CSDE1-204ENST00000369530 SMIM11BQ8TCY0 68 aa4.65□□□□□ -1.67
CSDE1-204ENST00000369530 CHCHD7Q9BUK0 85 aa4.65□□□□□ -1.67
CSDE1-204ENST00000369530 Q6ZQT0 140 aa4.64□□□□□ -1.67
CSDE1-204ENST00000369530 Q6ZVQ6 151 aa4.64□□□□□ -1.67
CSDE1-204ENST00000369530 SNURFQ9Y675 71 aa4.64□□□□□ -1.67
CSDE1-204ENST00000369530 HERC1Q15751 4861 aa4.64□□□□□ -1.67
CSDE1-204ENST00000369530 PRYO14603 147 aa4.64□□□□□ -1.67
CSDE1-204ENST00000369530 C16orf74Q96GX8 76 aa4.64□□□□□ -1.67
CSDE1-204ENST00000369530 CYP4F30PQ9H0H9 118 aa4.64□□□□□ -1.67
CSDE1-204ENST00000369530 M0R378 163 aa4.63□□□□□ -1.67
CSDE1-204ENST00000369530 DAD1P61803 113 aa4.63□□□□□ -1.67
CSDE1-204ENST00000369530 LRP1Q07954 4544 aaKnown RBP4.63□□□□□ -1.67
CSDE1-204ENST00000369530 LOC100131303A0A0U1RQF7 123 aa4.63□□□□□ -1.67
CSDE1-204ENST00000369530 SMIM1B2RUZ4 78 aa4.63□□□□□ -1.67
CSDE1-204ENST00000369530 H3BS24 57 aa4.63□□□□□ -1.67
CSDE1-204ENST00000369530 TMEM256-PLSCR3K7ERE1 68 aa4.63□□□□□ -1.67
CSDE1-204ENST00000369530 CRPP02741 224 aa4.63□□□□□ -1.67
CSDE1-204ENST00000369530 Q6ZRN7 208 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-204ENST00000369530 OCR1Q9BZK8 76 aa4.63□□□□□ -1.67
CSDE1-204ENST00000369530 K7EQD1 137 aa4.63□□□□□ -1.67
CSDE1-204ENST00000369530 Q9H8V8 135 aa4.62□□□□□ -1.67
CSDE1-204ENST00000369530 TOMM7Q9P0U1 55 aa4.62□□□□□ -1.67
CSDE1-204ENST00000369530 MUC7Q8TAX7 377 aa4.62□□□□□ -1.67
CSDE1-204ENST00000369530 CDKN2A-AS1Q9UH64 79 aa4.62□□□□□ -1.67
CSDE1-204ENST00000369530 H3BQ85 93 aa4.62□□□□□ -1.67
CSDE1-204ENST00000369530 PDE6GP18545 87 aa4.62□□□□□ -1.67
CSDE1-204ENST00000369530 UBE2BP63146 152 aa4.62□□□□□ -1.67
CSDE1-204ENST00000369530 NREPQ16612 68 aa4.62□□□□□ -1.67
CSDE1-204ENST00000369530 MPLKIPQ8TAP9 179 aa4.62□□□□□ -1.67
CSDE1-204ENST00000369530 A6NN06 94 aa4.61□□□□□ -1.67
CSDE1-204ENST00000369530 FUSP35637 526 aaKnown RBP eCLIP4.61□□□□□ -1.672e-9■□□□□ 9
CSDE1-204ENST00000369530 CD164L2Q6UWJ8 174 aa4.61□□□□□ -1.67
CSDE1-204ENST00000369530 APOC4P55056 127 aa4.61□□□□□ -1.67
CSDE1-204ENST00000369530 ZCCHC13Q8WW36 166 aaKnown RBP4.61□□□□□ -1.67
CSDE1-204ENST00000369530 CELA1Q9UNI1 258 aa4.61□□□□□ -1.67
CSDE1-204ENST00000369530 GYPEP15421 78 aa4.6□□□□□ -1.67
CSDE1-204ENST00000369530 CLPSL2Q6UWE3 100 aa4.6□□□□□ -1.67
CSDE1-204ENST00000369530 LECT2O14960 151 aa4.6□□□□□ -1.67
CSDE1-204ENST00000369530 VPREB1P12018 145 aa4.6□□□□□ -1.67
CSDE1-204ENST00000369530 LINC00476Q8WZB0 136 aa4.6□□□□□ -1.67
CSDE1-204ENST00000369530 SYCNQ0VAF6 134 aa4.6□□□□□ -1.67
CSDE1-204ENST00000369530 LINC00242Q5T6M2 205 aa4.6□□□□□ -1.67
CSDE1-204ENST00000369530 Q8N814 137 aa4.59□□□□□ -1.67
CSDE1-204ENST00000369530 KRTAP10-4P60372 401 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-204ENST00000369530 Q8N3U1 123 aa4.59□□□□□ -1.67
CSDE1-204ENST00000369530 TRAV22A0A0B4J277 110 aa4.59□□□□□ -1.68
CSDE1-204ENST00000369530 ATP11AUNQ6ZP68 121 aa4.59□□□□□ -1.68
CSDE1-204ENST00000369530 TRBV10-1A0A0K0K1A3 114 aa4.58□□□□□ -1.68
CSDE1-204ENST00000369530 H3BNG1 76 aa4.58□□□□□ -1.68
CSDE1-204ENST00000369530 C11orf45Q8TAV5 145 aa4.58□□□□□ -1.68
CSDE1-204ENST00000369530 TRBV6-4A0A1B0GX49 114 aa4.58□□□□□ -1.68
CSDE1-204ENST00000369530 COX6A2Q02221 97 aa4.58□□□□□ -1.68
CSDE1-204ENST00000369530 SND1-IT1Q9HBX3 110 aa4.58□□□□□ -1.68
CSDE1-204ENST00000369530 Q5VV11 94 aa4.57□□□□□ -1.68
CSDE1-204ENST00000369530 IGHV4-28A0A0C4DH34 117 aa4.57□□□□□ -1.68
CSDE1-204ENST00000369530 C8orf87E5RJ46 101 aa4.57□□□□□ -1.68
CSDE1-204ENST00000369530 NANOS2P60321 138 aaKnown RBP4.57□□□□□ -1.68
CSDE1-204ENST00000369530 A0A087WZ39 114 aa4.56□□□□□ -1.68
CSDE1-204ENST00000369530 BPY2O14599 106 aa4.56□□□□□ -1.68
CSDE1-204ENST00000369530 DIRC1Q969H9 104 aa4.56□□□□□ -1.68
CSDE1-204ENST00000369530 PRO0255Q9UI72 69 aa4.56□□□□□ -1.68
CSDE1-204ENST00000369530 IGLV10-54A0A075B6I4 117 aa4.56□□□□□ -1.68
CSDE1-204ENST00000369530 RTL8CO15255 209 aa4.56□□□□□ -1.68
CSDE1-204ENST00000369530 PSCAO43653 123 aa4.56□□□□□ -1.68
CSDE1-204ENST00000369530 CCL18P55774 89 aa4.56□□□□□ -1.68
CSDE1-204ENST00000369530 SERTAD4-AS1Q5TG53 156 aa4.56□□□□□ -1.68
CSDE1-204ENST00000369530 C1orf64Q8NEQ6 169 aa4.56□□□□□ -1.68
CSDE1-204ENST00000369530 ZNF73O43830 326 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-204ENST00000369530 SPART-AS1P0CW21 52 aa4.55□□□□□ -1.68
CSDE1-204ENST00000369530 UBE2AP49459 152 aa4.55□□□□□ -1.68
CSDE1-204ENST00000369530 A0A0J9YWU9 116 aa4.55□□□□□ -1.68
CSDE1-204ENST00000369530 NTM-AS1Q6ZSK4 140 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms