RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 LOC107984640A0A0U1RRK4 108 aa9.13□□□□□ -0.95
USF1-202ENST00000368020 LINC00846Q9NV44 126 aa9.13□□□□□ -0.95
USF1-202ENST00000368020 PRYO14603 147 aa9.11□□□□□ -0.95
USF1-202ENST00000368020 UBE2DNLQ8IWF7 75 aa9.11□□□□□ -0.95
USF1-202ENST00000368020 C14orf177Q52M58 125 aa9.11□□□□□ -0.95
USF1-202ENST00000368020 Q6ZQT0 140 aa9.11□□□□□ -0.95
USF1-202ENST00000368020 TENM2Q9NT68 2774 aa9.1□□□□□ -0.95
USF1-202ENST00000368020 C7orf33Q8WU49 177 aa9.1□□□□□ -0.95
USF1-202ENST00000368020 UBL5Q9BZL1 73 aa9.1□□□□□ -0.95
USF1-202ENST00000368020 C3orf84H3BNL1 204 aa9.09□□□□□ -0.95
USF1-202ENST00000368020 DHRS4-AS1Q9P1J3 65 aa9.09□□□□□ -0.95
USF1-202ENST00000368020 SERTAD4-AS1Q5TG53 156 aa9.08□□□□□ -0.96
USF1-202ENST00000368020 PKIGQ9Y2B9 76 aa9.08□□□□□ -0.96
USF1-202ENST00000368020 FAM236AA0A1B0GUQ0 79 aa9.08□□□□□ -0.96
USF1-202ENST00000368020 FAM236BA0A1B0GV22 79 aa9.08□□□□□ -0.96
USF1-202ENST00000368020 CASC10Q5T4H9 136 aa9.08□□□□□ -0.96
USF1-202ENST00000368020 PSCAO43653 123 aa9.07□□□□□ -0.96
USF1-202ENST00000368020 CNBPP62633 177 aaKnown RBP9.07□□□□□ -0.96
USF1-202ENST00000368020 DNAH7Q8WXX0 4024 aa9.07□□□□□ -0.96
USF1-202ENST00000368020 CSMD3Q7Z407 3707 aa9.06□□□□□ -0.96
USF1-202ENST00000368020 IGLV1-50A0A075B6I6 118 aa9.05□□□□□ -0.96
USF1-202ENST00000368020 TRBV7-4A0A0J9YYF1 115 aa9.05□□□□□ -0.96
USF1-202ENST00000368020 MRPL55Q7Z7F7 128 aaKnown RBP9.05□□□□□ -0.96
USF1-202ENST00000368020 SPRR1AP35321 89 aa9.04□□□□□ -0.96
USF1-202ENST00000368020 Q6ZRX8 168 aa9.04□□□□□ -0.96
USF1-202ENST00000368020 ETDCA0A1B0GVM5 59 aa9.03□□□□□ -0.96
USF1-202ENST00000368020 ATOX1O00244 68 aa9.02□□□□□ -0.96
USF1-202ENST00000368020 HIST1H4AP62805 103 aaKnown RBP9.02□□□□□ -0.96
USF1-202ENST00000368020 C16orf90A8MZG2 172 aa9.02□□□□□ -0.97
USF1-202ENST00000368020 DYNC2H1Q8NCM8 4307 aaKnown RBP9.01□□□□□ -0.97
USF1-202ENST00000368020 KRTAP4-16G5E9R7 235 aaPredicted RBP9.01□□□□□ -0.97
USF1-202ENST00000368020 IGKV3D-7A0A0C4DH55 119 aa9□□□□□ -0.97
USF1-202ENST00000368020 B5MCH6 92 aa9□□□□□ -0.97
USF1-202ENST00000368020 KRTAP1-5Q9BYS1 174 aa9□□□□□ -0.97
USF1-202ENST00000368020 FAM168BA1KXE4 195 aa8.99□□□□□ -0.97
USF1-202ENST00000368020 FAM19A5Q7Z5A7 132 aaPredicted RBP8.99□□□□□ -0.97
USF1-202ENST00000368020 A0A1B0GW54 56 aa8.98□□□□□ -0.97
USF1-202ENST00000368020 RPL37AP8A6NKH3 93 aa8.98□□□□□ -0.97
USF1-202ENST00000368020 DNAH1Q9P2D7 4330 aa8.98□□□□□ -0.97
USF1-202ENST00000368020 REG3GQ6UW15 175 aa8.97□□□□□ -0.97
USF1-202ENST00000368020 CXCL6P80162 114 aa8.97□□□□□ -0.97
USF1-202ENST00000368020 NBDYA0A0U1RRE5 68 aa8.96□□□□□ -0.98
USF1-202ENST00000368020 KRTAP7-1Q8IUC3 87 aa8.96□□□□□ -0.98
USF1-202ENST00000368020 STARD9Q9P2P6 4700 aa8.96□□□□□ -0.98
USF1-202ENST00000368020 IGLV5-48A0A075B6I7 105 aa8.95□□□□□ -0.98
USF1-202ENST00000368020 UQCRQO14949 82 aa8.95□□□□□ -0.98
USF1-202ENST00000368020 Q6ZVQ6 151 aa8.95□□□□□ -0.98
USF1-202ENST00000368020 A0A096LNI7 61 aa8.94□□□□□ -0.98
USF1-202ENST00000368020 LINC00474Q9P2X8 69 aa8.94□□□□□ -0.98
USF1-202ENST00000368020 CCDC179H3BU77 68 aa8.94□□□□□ -0.98
USF1-202ENST00000368020 Q8N377 158 aa8.94□□□□□ -0.98
USF1-202ENST00000368020 Q9BRP9 147 aa8.94□□□□□ -0.98
USF1-202ENST00000368020 LINC01547P58512 204 aaPredicted RBP8.93□□□□□ -0.98
USF1-202ENST00000368020 LINC00476Q8WZB0 136 aa8.93□□□□□ -0.98
USF1-202ENST00000368020 C3orf22Q8N5N4 141 aa8.92□□□□□ -0.98
USF1-202ENST00000368020 COX7CP15954 63 aa8.91□□□□□ -0.98
USF1-202ENST00000368020 UBE2BP63146 152 aa8.91□□□□□ -0.98
USF1-202ENST00000368020 PLECQ15149 4684 aaKnown RBP8.91□□□□□ -0.98
USF1-202ENST00000368020 BCE1O60756 84 aa8.91□□□□□ -0.98
USF1-202ENST00000368020 HAMPP81172 84 aa8.91□□□□□ -0.98
USF1-202ENST00000368020 C9orf163Q8N9P6 203 aa8.91□□□□□ -0.98
USF1-202ENST00000368020 DEFB105AQ8NG35 78 aa8.91□□□□□ -0.98
USF1-202ENST00000368020 IGKV2-24A0A0C4DH68 120 aa8.9□□□□□ -0.98
USF1-202ENST00000368020 FUSP35637 526 aaKnown RBP eCLIP8.9□□□□□ -0.98
USF1-202ENST00000368020 LRCOL1A6NCL2 159 aa8.89□□□□□ -0.99
USF1-202ENST00000368020 M0R2N4 97 aa8.89□□□□□ -0.99
USF1-202ENST00000368020 LY6G6CO95867 125 aa8.89□□□□□ -0.99
USF1-202ENST00000368020 SERP2Q8N6R1 65 aa8.89□□□□□ -0.99
USF1-202ENST00000368020 A0A087WVE0 104 aa8.88□□□□□ -0.99
USF1-202ENST00000368020 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.88□□□□□ -0.99
USF1-202ENST00000368020 H0Y9J4 135 aa8.87□□□□□ -0.99
USF1-202ENST00000368020 TNP2Q05952 138 aa8.87□□□□□ -0.99
USF1-202ENST00000368020 C9orf153Q5TBE3 101 aa8.87□□□□□ -0.99
USF1-202ENST00000368020 Q6ZR54 194 aa8.87□□□□□ -0.99
USF1-202ENST00000368020 Q6ZRN7 208 aaPredicted RBP8.87□□□□□ -0.99
USF1-202ENST00000368020 FAM19A1Q7Z5A9 133 aa8.86□□□□□ -0.99
USF1-202ENST00000368020 SMIM20Q8N5G0 67 aa8.86□□□□□ -0.99
USF1-202ENST00000368020 A0A1W2PNN7 141 aa8.85□□□□□ -0.99
USF1-202ENST00000368020 F8WEM9 126 aa8.85□□□□□ -0.99
USF1-202ENST00000368020 VPS13DQ5THJ4 4388 aa8.85□□□□□ -0.99
USF1-202ENST00000368020 NREPQ16612 68 aa8.85□□□□□ -0.99
USF1-202ENST00000368020 SS18L2Q9UHA2 77 aa8.85□□□□□ -0.99
USF1-202ENST00000368020 CRYGAP11844 174 aa8.84□□□□□ -0.99
USF1-202ENST00000368020 C1orf137Q5JT78 98 aa8.84□□□□□ -0.99
USF1-202ENST00000368020 LYSTQ99698 3801 aa8.84□□□□□ -0.99
USF1-202ENST00000368020 ST20-AS1Q8NBB2 130 aa8.83□□□□□ -1
USF1-202ENST00000368020 LCE6AA0A183 80 aa8.83□□□□□ -1
USF1-202ENST00000368020 Q8NBF4 154 aa8.83□□□□□ -1
USF1-202ENST00000368020 ERC2-IT1O76042 136 aa8.82□□□□□ -1
USF1-202ENST00000368020 SPRR4Q96PI1 79 aa8.8□□□□□ -1
USF1-202ENST00000368020 IGLV8-61A0A075B6I0 122 aa8.79□□□□□ -1
USF1-202ENST00000368020 BPY2O14599 106 aa8.78□□□□□ -1
USF1-202ENST00000368020 CHTF8P0CG12 524 aa8.78□□□□□ -1
USF1-202ENST00000368020 PRLHP81277 87 aa8.78□□□□□ -1
USF1-202ENST00000368020 ALMS1Q8TCU4 4167 aa8.78□□□□□ -1
USF1-202ENST00000368020 C1orf134Q5TEV5 83 aa8.77□□□□□ -1
USF1-202ENST00000368020 PHF5AQ7RTV0 110 aaKnown RBP8.77□□□□□ -1
USF1-202ENST00000368020 HIGD2AQ9BW72 106 aa8.77□□□□□ -1
USF1-202ENST00000368020 KRTAP3-3Q9BYR6 98 aa8.77□□□□□ -1
USF1-202ENST00000368020 KRTAP3-2Q9BYR7 98 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms