RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 H3BNG1 76 aa9.79□□□□□ -0.84
PRKN-204ENST00000366896 SMIM26A0A096LP01 95 aa9.79□□□□□ -0.84
PRKN-204ENST00000366896 TRBV7-6A0A0J9YX20 115 aa9.79□□□□□ -0.84
PRKN-204ENST00000366896 NDUFC1O43677 76 aa9.78□□□□□ -0.84
PRKN-204ENST00000366896 HUWE1Q7Z6Z7 4374 aaKnown RBP9.78□□□□□ -0.84
PRKN-204ENST00000366896 LINC00336Q6ZUF6 198 aa9.78□□□□□ -0.84
PRKN-204ENST00000366896 FP248Q71RG6 208 aaPredicted RBP9.78□□□□□ -0.84
PRKN-204ENST00000366896 C6orf48Q9UBA6 75 aa9.78□□□□□ -0.84
PRKN-204ENST00000366896 DNAH9Q9NYC9 4486 aa9.77□□□□□ -0.84
PRKN-204ENST00000366896 XAGE1AQ9HD64 81 aa9.77□□□□□ -0.85
PRKN-204ENST00000366896 B9D2Q9BPU9 175 aa9.77□□□□□ -0.85
PRKN-204ENST00000366896 PRO0628Q9UI54 55 aa9.77□□□□□ -0.85
PRKN-204ENST00000366896 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.76□□□□□ -0.85
PRKN-204ENST00000366896 DIRC1Q969H9 104 aa9.76□□□□□ -0.85
PRKN-204ENST00000366896 SCXQ7RTU7 201 aa9.76□□□□□ -0.85
PRKN-204ENST00000366896 ATP5EP56381 51 aaPredicted RBP9.74□□□□□ -0.85
PRKN-204ENST00000366896 TENM3Q9P273 2699 aa9.74□□□□□ -0.85
PRKN-204ENST00000366896 NREPQ16612 68 aa9.73□□□□□ -0.85
PRKN-204ENST00000366896 HIGD2BQ4VC39 106 aa9.73□□□□□ -0.85
PRKN-204ENST00000366896 PRKDCP78527 4128 aaKnown RBP9.73□□□□□ -0.85
PRKN-204ENST00000366896 ZNF73O43830 326 aaPredicted RBP9.73□□□□□ -0.85
PRKN-204ENST00000366896 ELOF1P60002 83 aaKnown RBP9.73□□□□□ -0.85
PRKN-204ENST00000366896 KRTAP26-1Q6PEX3 210 aa9.73□□□□□ -0.85
PRKN-204ENST00000366896 WFDC10BQ8IUB3 73 aa9.73□□□□□ -0.85
PRKN-204ENST00000366896 MEGF8Q7Z7M0 2845 aa9.72□□□□□ -0.85
PRKN-204ENST00000366896 COX7BP24311 80 aa9.72□□□□□ -0.85
PRKN-204ENST00000366896 F8WDY8 70 aa9.72□□□□□ -0.85
PRKN-204ENST00000366896 VPREB1P12018 145 aa9.71□□□□□ -0.85
PRKN-204ENST00000366896 ERC2-IT1O76042 136 aa9.71□□□□□ -0.86
PRKN-204ENST00000366896 BPY2O14599 106 aa9.7□□□□□ -0.86
PRKN-204ENST00000366896 TMEM254Q8TBM7 123 aa9.7□□□□□ -0.86
PRKN-204ENST00000366896 M0R378 163 aa9.7□□□□□ -0.86
PRKN-204ENST00000366896 CAMK2N2Q96S95 79 aa9.69□□□□□ -0.86
PRKN-204ENST00000366896 LINC00474Q9P2X8 69 aa9.68□□□□□ -0.86
PRKN-204ENST00000366896 Q6ZRU5 148 aa9.66□□□□□ -0.86
PRKN-204ENST00000366896 C15orf56Q8N910 161 aa9.65□□□□□ -0.86
PRKN-204ENST00000366896 IGKV4-1P06312 121 aa9.65□□□□□ -0.86
PRKN-204ENST00000366896 Q6ZTC4 211 aa9.65□□□□□ -0.86
PRKN-204ENST00000366896 LINC00528Q8N1L1 170 aa9.64□□□□□ -0.87
PRKN-204ENST00000366896 C11orf45Q8TAV5 145 aa9.64□□□□□ -0.87
PRKN-204ENST00000366896 COL7A1Q02388 2944 aa9.64□□□□□ -0.87
PRKN-204ENST00000366896 Q8N9L7 120 aa9.64□□□□□ -0.87
PRKN-204ENST00000366896 OCR1Q9BZK8 76 aa9.64□□□□□ -0.87
PRKN-204ENST00000366896 A0A0U1RQV1 116 aa9.63□□□□□ -0.87
PRKN-204ENST00000366896 LINC01556Q5JQF7 62 aa9.62□□□□□ -0.87
PRKN-204ENST00000366896 PRYO14603 147 aa9.61□□□□□ -0.87
PRKN-204ENST00000366896 ESRGQ1W209 222 aa9.61□□□□□ -0.87
PRKN-204ENST00000366896 C1orf43Q9BWL3 253 aa9.61□□□□□ -0.87
PRKN-204ENST00000366896 FAM229BQ4G0N7 80 aa9.6□□□□□ -0.87
PRKN-204ENST00000366896 FBN3Q75N90 2809 aa9.59□□□□□ -0.87
PRKN-204ENST00000366896 Q6ZRP5 223 aa9.59□□□□□ -0.87
PRKN-204ENST00000366896 STAB2Q8WWQ8 2551 aa9.59□□□□□ -0.87
PRKN-204ENST00000366896 KCNQ1DNQ9H478 68 aa9.57□□□□□ -0.88
PRKN-204ENST00000366896 DEFB131BA0A096LNP1 70 aa9.56□□□□□ -0.88
PRKN-204ENST00000366896 FUSP35637 526 aaKnown RBP eCLIP9.56□□□□□ -0.88
PRKN-204ENST00000366896 SYCNQ0VAF6 134 aa9.56□□□□□ -0.88
PRKN-204ENST00000366896 IGKV2D-24A0A075B6R9 120 aa9.56□□□□□ -0.88
PRKN-204ENST00000366896 TLX1NBP0CAT3 122 aa9.56□□□□□ -0.88
PRKN-204ENST00000366896 PLA2G2DQ9UNK4 145 aa9.56□□□□□ -0.88
PRKN-204ENST00000366896 BRK1Q8WUW1 75 aa9.55□□□□□ -0.88
PRKN-204ENST00000366896 C3orf84H3BNL1 204 aa9.54□□□□□ -0.88
PRKN-204ENST00000366896 PKIGQ9Y2B9 76 aa9.54□□□□□ -0.88
PRKN-204ENST00000366896 DNAH10OSP0CZ25 163 aa9.54□□□□□ -0.88
PRKN-204ENST00000366896 HIGD2AQ9BW72 106 aa9.54□□□□□ -0.88
PRKN-204ENST00000366896 MPLKIPQ8TAP9 179 aa9.53□□□□□ -0.88
PRKN-204ENST00000366896 A0A1B0GW54 56 aa9.53□□□□□ -0.88
PRKN-204ENST00000366896 SERTAD4-AS1Q5TG53 156 aa9.52□□□□□ -0.88
PRKN-204ENST00000366896 NKAPP1Q8N9T2 125 aa9.51□□□□□ -0.89
PRKN-204ENST00000366896 IGLV5-48A0A075B6I7 105 aa9.51□□□□□ -0.89
PRKN-204ENST00000366896 IGLV5-37A0A075B6J1 123 aa9.51□□□□□ -0.89
PRKN-204ENST00000366896 Q8N377 158 aa9.5□□□□□ -0.89
PRKN-204ENST00000366896 C7orf33Q8WU49 177 aa9.5□□□□□ -0.89
PRKN-204ENST00000366896 LCE6AA0A183 80 aa9.49□□□□□ -0.89
PRKN-204ENST00000366896 DHRS4-AS1Q9P1J3 65 aa9.49□□□□□ -0.89
PRKN-204ENST00000366896 SMIM29Q86T20 159 aa9.49□□□□□ -0.89
PRKN-204ENST00000366896 DNAH7Q8WXX0 4024 aa9.49□□□□□ -0.89
PRKN-204ENST00000366896 DYNC2H1Q8NCM8 4307 aaKnown RBP9.47□□□□□ -0.89
PRKN-204ENST00000366896 SPRR1AP35321 89 aa9.47□□□□□ -0.89
PRKN-204ENST00000366896 DEFB105AQ8NG35 78 aa9.47□□□□□ -0.89
PRKN-204ENST00000366896 KRTAP4-16G5E9R7 235 aaPredicted RBP9.47□□□□□ -0.89
PRKN-204ENST00000366896 FAM30AQ9NZY2 134 aa9.47□□□□□ -0.89
PRKN-204ENST00000366896 Q6ZRX8 168 aa9.46□□□□□ -0.9
PRKN-204ENST00000366896 CASC10Q5T4H9 136 aa9.45□□□□□ -0.9
PRKN-204ENST00000366896 hDV103S1A0JD37 113 aa9.45□□□□□ -0.9
PRKN-204ENST00000366896 FAM168BA1KXE4 195 aa9.45□□□□□ -0.9
PRKN-204ENST00000366896 A0A1W2PNM2 257 aa9.44□□□□□ -0.9
PRKN-204ENST00000366896 RPL37AP8A6NKH3 93 aa9.44□□□□□ -0.9
PRKN-204ENST00000366896 IGLV1-50A0A075B6I6 118 aa9.44□□□□□ -0.9
PRKN-204ENST00000366896 NUPR2A6NF83 97 aa9.43□□□□□ -0.9
PRKN-204ENST00000366896 C1orf195Q5TG92 126 aa9.43□□□□□ -0.9
PRKN-204ENST00000366896 TNP2Q05952 138 aa9.43□□□□□ -0.9
PRKN-204ENST00000366896 TGP01266 2768 aa9.43□□□□□ -0.9
PRKN-204ENST00000366896 ZCCHC13Q8WW36 166 aaKnown RBP9.42□□□□□ -0.9
PRKN-204ENST00000366896 CSMD3Q7Z407 3707 aa9.42□□□□□ -0.9
PRKN-204ENST00000366896 DNAH1Q9P2D7 4330 aa9.41□□□□□ -0.9
PRKN-204ENST00000366896 Q9BRP9 147 aa9.41□□□□□ -0.9
PRKN-204ENST00000366896 APLNQ9ULZ1 77 aa9.41□□□□□ -0.9
PRKN-204ENST00000366896 LINC00588Q9Y4M8 146 aa9.41□□□□□ -0.9
PRKN-204ENST00000366896 STARD9Q9P2P6 4700 aa9.41□□□□□ -0.9
PRKN-204ENST00000366896 KRTAP7-1Q8IUC3 87 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms