RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 RGPD4Q7Z3J3 1758 aa-0.55□□□□□ -2.5
RNU6-28P-201ENST00000362378 PKD1P98161 4303 aa-0.55□□□□□ -2.5
RNU6-28P-201ENST00000362378 PYY3Q5JQD4 70 aa-0.55□□□□□ -2.5
RNU6-28P-201ENST00000362378 LRRC9Q6ZRR7 1453 aa-0.55□□□□□ -2.5
RNU6-28P-201ENST00000362378 RNF213Q63HN8 5207 aa-0.55□□□□□ -2.5
RNU6-28P-201ENST00000362378 UBR3Q6ZT12 1888 aa-0.56□□□□□ -2.5
RNU6-28P-201ENST00000362378 SPRR2AP35326 72 aa-0.56□□□□□ -2.5
RNU6-28P-201ENST00000362378 ABCC3O15438 1527 aa-0.56□□□□□ -2.5
RNU6-28P-201ENST00000362378 SPTBN4Q9H254 2564 aa-0.56□□□□□ -2.5
RNU6-28P-201ENST00000362378 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.57□□□□□ -2.5
RNU6-28P-201ENST00000362378 RGPD3A6NKT7 1758 aaPredicted RBP-0.57□□□□□ -2.5
RNU6-28P-201ENST00000362378 IQCF6A8MYZ5 107 aa-0.57□□□□□ -2.5
RNU6-28P-201ENST00000362378 Q9H521 79 aa-0.57□□□□□ -2.5
RNU6-28P-201ENST00000362378 V9GYS6 101 aa-0.57□□□□□ -2.5
RNU6-28P-201ENST00000362378 PTPN23Q9H3S7 1636 aa-0.57□□□□□ -2.5
RNU6-28P-201ENST00000362378 RGPD8O14715 1765 aaPredicted RBP-0.57□□□□□ -2.5
RNU6-28P-201ENST00000362378 RGPD5Q99666 1765 aa-0.57□□□□□ -2.5
RNU6-28P-201ENST00000362378 ADAMTS12P58397 1594 aa-0.57□□□□□ -2.5
RNU6-28P-201ENST00000362378 STAB2Q8WWQ8 2551 aa-0.58□□□□□ -2.5
RNU6-28P-201ENST00000362378 K7EP34 96 aa-0.58□□□□□ -2.5
RNU6-28P-201ENST00000362378 CYB5AP00167 134 aa-0.58□□□□□ -2.5
RNU6-28P-201ENST00000362378 KRTAP6-2Q3LI66 62 aa-0.58□□□□□ -2.5
RNU6-28P-201ENST00000362378 COX6B2Q6YFQ2 88 aa-0.58□□□□□ -2.5
RNU6-28P-201ENST00000362378 GAFA1Q96PS6 74 aa-0.58□□□□□ -2.5
RNU6-28P-201ENST00000362378 PLIN4Q96Q06 1357 aa-0.58□□□□□ -2.5
RNU6-28P-201ENST00000362378 NBEAL1Q6ZS30 2694 aa-0.59□□□□□ -2.5
RNU6-28P-201ENST00000362378 RPL38P63173 70 aaKnown RBP-0.59□□□□□ -2.5
RNU6-28P-201ENST00000362378 SUPT6HQ7KZ85 1726 aaKnown RBP-0.59□□□□□ -2.5
RNU6-28P-201ENST00000362378 RYR1P21817 5038 aa-0.59□□□□□ -2.5
RNU6-28P-201ENST00000362378 SVEP1Q4LDE5 3571 aa-0.6□□□□□ -2.5
RNU6-28P-201ENST00000362378 TMEM131LA2VDJ0 1609 aa-0.6□□□□□ -2.5
RNU6-28P-201ENST00000362378 CICQ96RK0 1608 aaPredicted RBP-0.6□□□□□ -2.5
RNU6-28P-201ENST00000362378 MYMXA0A1B0GTQ4 84 aa-0.6□□□□□ -2.51
RNU6-28P-201ENST00000362378 UBR4Q5T4S7 5183 aa-0.61□□□□□ -2.51
RNU6-28P-201ENST00000362378 SETD2Q9BYW2 2564 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-28P-201ENST00000362378 RYR2Q92736 4967 aa-0.61□□□□□ -2.51
RNU6-28P-201ENST00000362378 PVALEFA0A1B0GWK0 134 aa-0.61□□□□□ -2.51
RNU6-28P-201ENST00000362378 SNRPFP62306 86 aaKnown RBP-0.61□□□□□ -2.51
RNU6-28P-201ENST00000362378 KRTAP19-8Q3LI54 63 aa-0.61□□□□□ -2.51
RNU6-28P-201ENST00000362378 KNL1Q8NG31 2342 aa-0.62□□□□□ -2.51
RNU6-28P-201ENST00000362378 S100A16Q96FQ6 103 aaKnown RBP-0.62□□□□□ -2.51
RNU6-28P-201ENST00000362378 TIAM2Q8IVF5 1701 aa-0.62□□□□□ -2.51
RNU6-28P-201ENST00000362378 TRANK1O15050 2925 aa-0.63□□□□□ -2.51
RNU6-28P-201ENST00000362378 POLR1AO95602 1720 aaPredicted RBP-0.63□□□□□ -2.51
RNU6-28P-201ENST00000362378 TRAV21A0A0B4J279 112 aa-0.63□□□□□ -2.51
RNU6-28P-201ENST00000362378 LINC00643Q86TS7 51 aa-0.63□□□□□ -2.51
RNU6-28P-201ENST00000362378 USP32Q8NFA0 1604 aa-0.64□□□□□ -2.51
RNU6-28P-201ENST00000362378 AKAP13Q12802 2813 aa-0.64□□□□□ -2.51
RNU6-28P-201ENST00000362378 KIAA1109Q2LD37 5005 aa-0.64□□□□□ -2.51
RNU6-28P-201ENST00000362378 RABAC1Q9UI14 185 aa-0.64□□□□□ -2.51
RNU6-28P-201ENST00000362378 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.65□□□□□ -2.51
RNU6-28P-201ENST00000362378 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-28P-201ENST00000362378 DOPEY1Q5JWR5 2465 aa-0.65□□□□□ -2.51
RNU6-28P-201ENST00000362378 NDUFA3O95167 84 aa-0.65□□□□□ -2.51
RNU6-28P-201ENST00000362378 KIF14Q15058 1648 aa-0.65□□□□□ -2.51
RNU6-28P-201ENST00000362378 MAP3K4Q9Y6R4 1608 aa-0.65□□□□□ -2.51
RNU6-28P-201ENST00000362378 HIVEP1P15822 2718 aa-0.66□□□□□ -2.51
RNU6-28P-201ENST00000362378 C4AP0C0L4 1744 aa-0.66□□□□□ -2.51
RNU6-28P-201ENST00000362378 C4BP0C0L5 1744 aa-0.66□□□□□ -2.51
RNU6-28P-201ENST00000362378 SPRR2EP22531 72 aa-0.66□□□□□ -2.52
RNU6-28P-201ENST00000362378 LTN1O94822 1766 aa-0.66□□□□□ -2.52
RNU6-28P-201ENST00000362378 PPLO60437 1756 aa-0.67□□□□□ -2.52
RNU6-28P-201ENST00000362378 CEBPZOSA8MTT3 80 aa-0.67□□□□□ -2.52
RNU6-28P-201ENST00000362378 WFDC9Q8NEX5 89 aa-0.67□□□□□ -2.52
RNU6-28P-201ENST00000362378 TGP01266 2768 aa-0.67□□□□□ -2.52
RNU6-28P-201ENST00000362378 SONP18583 2426 aaKnown RBP-0.67□□□□□ -2.52
RNU6-28P-201ENST00000362378 ACYP1P07311 99 aa-0.68□□□□□ -2.52
RNU6-28P-201ENST00000362378 EPPK1P58107 5090 aaKnown RBP-0.69□□□□□ -2.52
RNU6-28P-201ENST00000362378 HERC2O95714 4834 aa-0.69□□□□□ -2.52
RNU6-28P-201ENST00000362378 TEP1Q99973 2627 aaKnown RBP-0.69□□□□□ -2.52
RNU6-28P-201ENST00000362378 H0YGG7 62 aa-0.69□□□□□ -2.52
RNU6-28P-201ENST00000362378 NDUFB1O75438 58 aa-0.69□□□□□ -2.52
RNU6-28P-201ENST00000362378 URB2Q14146 1524 aaKnown RBP-0.69□□□□□ -2.52
RNU6-28P-201ENST00000362378 NWD1Q149M9 1564 aa-0.7□□□□□ -2.52
RNU6-28P-201ENST00000362378 ZNF831Q5JPB2 1677 aa-0.7□□□□□ -2.52
RNU6-28P-201ENST00000362378 DOT1LQ8TEK3 1739 aa-0.7□□□□□ -2.52
RNU6-28P-201ENST00000362378 NESP48681 1621 aa-0.71□□□□□ -2.52
RNU6-28P-201ENST00000362378 LAMA5O15230 3695 aa-0.71□□□□□ -2.52
RNU6-28P-201ENST00000362378 NCOA2Q15596 1464 aa-0.71□□□□□ -2.52
RNU6-28P-201ENST00000362378 DNAH6Q9C0G6 4158 aa-0.72□□□□□ -2.52
RNU6-28P-201ENST00000362378 MAGI3Q5TCQ9 1506 aa-0.72□□□□□ -2.52
RNU6-28P-201ENST00000362378 NBASA2RRP1 2371 aa-0.72□□□□□ -2.52
RNU6-28P-201ENST00000362378 LYSTQ99698 3801 aa-0.72□□□□□ -2.52
RNU6-28P-201ENST00000362378 FAT3Q8TDW7 4589 aa-0.73□□□□□ -2.53
RNU6-28P-201ENST00000362378 ABCA13Q86UQ4 5058 aa-0.73□□□□□ -2.53
RNU6-28P-201ENST00000362378 TDRG1Q3Y452 100 aa-0.73□□□□□ -2.53
RNU6-28P-201ENST00000362378 TNRC18O15417 2968 aaPredicted RBP-0.73□□□□□ -2.53
RNU6-28P-201ENST00000362378 UACAQ9BZF9 1416 aa-0.73□□□□□ -2.53
RNU6-28P-201ENST00000362378 LAMA2P24043 3122 aaKnown RBP-0.73□□□□□ -2.53
RNU6-28P-201ENST00000362378 PDE4DIPQ5VU43 2346 aa-0.73□□□□□ -2.53
RNU6-28P-201ENST00000362378 DNAH9Q9NYC9 4486 aa-0.74□□□□□ -2.53
RNU6-28P-201ENST00000362378 PRRC2CQ9Y520 2896 aaKnown RBP-0.74□□□□□ -2.53
RNU6-28P-201ENST00000362378 PLXNC1O60486 1568 aa-0.74□□□□□ -2.53
RNU6-28P-201ENST00000362378 HECTD1Q9ULT8 2610 aa-0.74□□□□□ -2.53
RNU6-28P-201ENST00000362378 NBEAL2Q6ZNJ1 2754 aa-0.74□□□□□ -2.53
RNU6-28P-201ENST00000362378 CREBBPQ92793 2442 aa-0.74□□□□□ -2.53
RNU6-28P-201ENST00000362378 HERC1Q15751 4861 aa-0.75□□□□□ -2.53
RNU6-28P-201ENST00000362378 C3orf79P0CE67 100 aa-0.75□□□□□ -2.53
RNU6-28P-201ENST00000362378 HYDINQ4G0P3 5121 aa-0.75□□□□□ -2.53
RNU6-28P-201ENST00000362378 NF1P21359 2839 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms