RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 ZNF861PO60384 105 aa10.48□□□□□ -0.73
COL18A1-203ENST00000359759 FAM104AQ969W3 186 aa10.47□□□□□ -0.73
COL18A1-203ENST00000359759 ZNF575Q86XF7 245 aa10.46□□□□□ -0.73
COL18A1-203ENST00000359759 KRTAP10-11P60412 298 aa10.46□□□□□ -0.73
COL18A1-203ENST00000359759 CSNK1G2-AS1Q8NCQ2 148 aa10.46□□□□□ -0.73
COL18A1-203ENST00000359759 ZNF462Q96JM2 2506 aa10.46□□□□□ -0.74
COL18A1-203ENST00000359759 WWC2-AS2Q96NR7 200 aa10.44□□□□□ -0.74
COL18A1-203ENST00000359759 RBM12B-AS1Q9P1G2 102 aa10.41□□□□□ -0.74
COL18A1-203ENST00000359759 CHD8Q9HCK8 2581 aa10.41□□□□□ -0.74
COL18A1-203ENST00000359759 LUZP6Q538Z0 58 aa10.4□□□□□ -0.74
COL18A1-203ENST00000359759 CASC10Q5T4H9 136 aa10.37□□□□□ -0.75
COL18A1-203ENST00000359759 PRR34Q9NV39 138 aa10.37□□□□□ -0.75
COL18A1-203ENST00000359759 A0A087WTM6 91 aa10.36□□□□□ -0.75
COL18A1-203ENST00000359759 A0A1W2PNM2 257 aa10.36□□□□□ -0.75
COL18A1-203ENST00000359759 PCSK5Q92824 1860 aa10.36□□□□□ -0.75
COL18A1-203ENST00000359759 IGLV7-43P04211 117 aa10.36□□□□□ -0.75
COL18A1-203ENST00000359759 PSORS1C2Q9UIG4 136 aa10.36□□□□□ -0.75
COL18A1-203ENST00000359759 FN1P02751 2386 aaKnown RBP10.35□□□□□ -0.75
COL18A1-203ENST00000359759 K7EIL1 84 aa10.35□□□□□ -0.75
COL18A1-203ENST00000359759 C9orf163Q8N9P6 203 aa10.34□□□□□ -0.75
COL18A1-203ENST00000359759 SPANXA2-OT1Q8N9U9 137 aa10.33□□□□□ -0.76
COL18A1-203ENST00000359759 PRR26Q8N8Z3 221 aa10.32□□□□□ -0.76
COL18A1-203ENST00000359759 SPRR4Q96PI1 79 aa10.32□□□□□ -0.76
COL18A1-203ENST00000359759 PLA2G2DQ9UNK4 145 aa10.31□□□□□ -0.76
COL18A1-203ENST00000359759 GOLGB1Q14789 3259 aaKnown RBP10.31□□□□□ -0.76
COL18A1-203ENST00000359759 SPTBN4Q9H254 2564 aa10.31□□□□□ -0.76
COL18A1-203ENST00000359759 TLX1NBP0CAT3 122 aa10.3□□□□□ -0.76
COL18A1-203ENST00000359759 KRTAP10-3P60369 221 aa10.3□□□□□ -0.76
COL18A1-203ENST00000359759 ABCA12Q86UK0 2595 aa10.29□□□□□ -0.76
COL18A1-203ENST00000359759 WDR87Q6ZQQ6 2873 aa10.29□□□□□ -0.76
COL18A1-203ENST00000359759 GIG44P09565 113 aaPredicted RBP10.29□□□□□ -0.76
COL18A1-203ENST00000359759 TLN1Q9Y490 2541 aaKnown RBP10.28□□□□□ -0.76
COL18A1-203ENST00000359759 WIPF1O43516 503 aa10.28□□□□□ -0.76
COL18A1-203ENST00000359759 Q1T7F1 81 aa10.28□□□□□ -0.76
COL18A1-203ENST00000359759 FASNP49327 2511 aaKnown RBP10.27□□□□□ -0.77
COL18A1-203ENST00000359759 KLK9Q2XQG4 91 aa10.27□□□□□ -0.77
COL18A1-203ENST00000359759 ANKRD11Q6UB99 2663 aaPredicted RBP10.25□□□□□ -0.77
COL18A1-203ENST00000359759 MYO9AB2RTY4 2548 aa10.25□□□□□ -0.77
COL18A1-203ENST00000359759 C19orf73Q9NVV2 129 aa10.25□□□□□ -0.77
COL18A1-203ENST00000359759 CAMK2N1Q7Z7J9 78 aa10.21□□□□□ -0.77
COL18A1-203ENST00000359759 FAM229BQ4G0N7 80 aa10.21□□□□□ -0.78
COL18A1-203ENST00000359759 TLN2Q9Y4G6 2542 aa10.2□□□□□ -0.78
COL18A1-203ENST00000359759 PRAC1Q96KF2 57 aa10.19□□□□□ -0.78
COL18A1-203ENST00000359759 OCR1Q9BZK8 76 aa10.19□□□□□ -0.78
COL18A1-203ENST00000359759 A0A1B0GU33 70 aa10.19□□□□□ -0.78
COL18A1-203ENST00000359759 LINC00483Q53H64 154 aa10.18□□□□□ -0.78
COL18A1-203ENST00000359759 LINC00612Q8N6U2 182 aa10.16□□□□□ -0.78
COL18A1-203ENST00000359759 H3BS24 57 aa10.15□□□□□ -0.78
COL18A1-203ENST00000359759 CENPFP49454 3210 aa10.15□□□□□ -0.78
COL18A1-203ENST00000359759 HRES1P13985 223 aa10.15□□□□□ -0.78
COL18A1-203ENST00000359759 Q6ZSA8 131 aa10.14□□□□□ -0.79
COL18A1-203ENST00000359759 CEP295Q9C0D2 2601 aa10.14□□□□□ -0.79
COL18A1-203ENST00000359759 CNBPP62633 177 aaKnown RBP10.13□□□□□ -0.79
COL18A1-203ENST00000359759 Q75L30 129 aa10.12□□□□□ -0.79
COL18A1-203ENST00000359759 IGLV7-46A0A075B6I9 117 aa10.1□□□□□ -0.79
COL18A1-203ENST00000359759 POLQO75417 2590 aa10.08□□□□□ -0.8
COL18A1-203ENST00000359759 F8P00451 2351 aa10.08□□□□□ -0.8
COL18A1-203ENST00000359759 M0R2T5 61 aa10.07□□□□□ -0.8
COL18A1-203ENST00000359759 CSAG1Q6PB30 78 aa10.06□□□□□ -0.8
COL18A1-203ENST00000359759 CR1P17927 2039 aa10.05□□□□□ -0.8
COL18A1-203ENST00000359759 Q5XG85 94 aa10.04□□□□□ -0.8
COL18A1-203ENST00000359759 ANKRD17O75179 2603 aaKnown RBP10.04□□□□□ -0.8
COL18A1-203ENST00000359759 USP9XQ93008 2570 aaPredicted RBP10.03□□□□□ -0.8
COL18A1-203ENST00000359759 Q8N9P0 234 aaPredicted RBP10.02□□□□□ -0.8
COL18A1-203ENST00000359759 S4R3F8 94 aa10.02□□□□□ -0.81
COL18A1-203ENST00000359759 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.01□□□□□ -0.81
COL18A1-203ENST00000359759 TNP2Q05952 138 aa10.01□□□□□ -0.81
COL18A1-203ENST00000359759 CYSTM1Q9H1C7 97 aa10□□□□□ -0.81
COL18A1-203ENST00000359759 A0A096LNT2 108 aa9.99□□□□□ -0.81
COL18A1-203ENST00000359759 MTORP42345 2549 aa9.99□□□□□ -0.81
COL18A1-203ENST00000359759 SETD2Q9BYW2 2564 aaPredicted RBP9.98□□□□□ -0.81
COL18A1-203ENST00000359759 LINC01558Q9Y6Z2 57 aa9.98□□□□□ -0.81
COL18A1-203ENST00000359759 SPINK7P58062 85 aa9.96□□□□□ -0.81
COL18A1-203ENST00000359759 ACANP16112 2415 aa9.96□□□□□ -0.82
COL18A1-203ENST00000359759 DMAC1Q96GE9 116 aa9.96□□□□□ -0.82
COL18A1-203ENST00000359759 UTRNP46939 3433 aa9.95□□□□□ -0.82
COL18A1-203ENST00000359759 MMP24-AS1A0A0U1RRL7 71 aa9.95□□□□□ -0.82
COL18A1-203ENST00000359759 FP248Q71RG6 208 aaPredicted RBP9.95□□□□□ -0.82
COL18A1-203ENST00000359759 A0A0A0MQY5 61 aa9.94□□□□□ -0.82
COL18A1-203ENST00000359759 Q5VV11 94 aa9.94□□□□□ -0.82
COL18A1-203ENST00000359759 ZCCHC13Q8WW36 166 aaKnown RBP9.93□□□□□ -0.82
COL18A1-203ENST00000359759 PKD1L2Q7Z442 2459 aa9.92□□□□□ -0.82
COL18A1-203ENST00000359759 USP9YO00507 2555 aaPredicted RBP9.88□□□□□ -0.83
COL18A1-203ENST00000359759 Q5W150 140 aa9.88□□□□□ -0.83
COL18A1-203ENST00000359759 EPG5Q9HCE0 2579 aa9.87□□□□□ -0.83
COL18A1-203ENST00000359759 Q8NDZ9 215 aa9.86□□□□□ -0.83
COL18A1-203ENST00000359759 R4GN34 69 aa9.82□□□□□ -0.84
COL18A1-203ENST00000359759 FLNBO75369 2602 aaKnown RBP9.82□□□□□ -0.84
COL18A1-203ENST00000359759 HECTD1Q9ULT8 2610 aa9.81□□□□□ -0.84
COL18A1-203ENST00000359759 KRTAP1-3Q8IUG1 177 aa9.8□□□□□ -0.84
COL18A1-203ENST00000359759 ROMO1P60602 79 aa9.77□□□□□ -0.85
COL18A1-203ENST00000359759 KRTAP1-1Q07627 177 aa9.73□□□□□ -0.85
COL18A1-203ENST00000359759 OXTP01178 125 aa9.72□□□□□ -0.85
COL18A1-203ENST00000359759 PLAC8Q9NZF1 115 aa9.72□□□□□ -0.85
COL18A1-203ENST00000359759 LINC00472Q9H8W2 130 aa9.71□□□□□ -0.85
COL18A1-203ENST00000359759 RPL37P61927 97 aaKnown RBP9.7□□□□□ -0.86
COL18A1-203ENST00000359759 SPATA8Q6RVD6 105 aa9.68□□□□□ -0.86
COL18A1-203ENST00000359759 M0QZ58 72 aa9.68□□□□□ -0.86
COL18A1-203ENST00000359759 H1FX-AS1Q4G0G2 97 aa9.68□□□□□ -0.86
COL18A1-203ENST00000359759 SPRR1AP35321 89 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms