RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 CXCL6P80162 114 aa8.43□□□□□ -1.06
RTFDC1-202ENST00000357348 Q6ZVQ6 151 aa8.43□□□□□ -1.06
RTFDC1-202ENST00000357348 H7BZZ5 65 aa8.42□□□□□ -1.06
RTFDC1-202ENST00000357348 KLKP1Q107X0 134 aa8.42□□□□□ -1.06
RTFDC1-202ENST00000357348 C10orf25Q5T742 122 aa8.42□□□□□ -1.06
RTFDC1-202ENST00000357348 GVQW2A0A096LPI5 108 aaPredicted RBP8.41□□□□□ -1.06
RTFDC1-202ENST00000357348 FAM236DA0A1B0GTK5 79 aa8.41□□□□□ -1.06
RTFDC1-202ENST00000357348 FAM236CP0DP71 79 aa8.41□□□□□ -1.06
RTFDC1-202ENST00000357348 LINC00588Q9Y4M8 146 aa8.41□□□□□ -1.06
RTFDC1-202ENST00000357348 UNQ6190/PRO20217Q6UXQ8 127 aa8.41□□□□□ -1.06
RTFDC1-202ENST00000357348 LAMTOR3Q9UHA4 124 aa8.41□□□□□ -1.06
RTFDC1-202ENST00000357348 DYNC2H1Q8NCM8 4307 aaKnown RBP8.41□□□□□ -1.06
RTFDC1-202ENST00000357348 SPAG11BQ08648 103 aa8.39□□□□□ -1.07
RTFDC1-202ENST00000357348 C4orf26Q17RF5 130 aa8.39□□□□□ -1.07
RTFDC1-202ENST00000357348 Q6ZQY7 126 aa8.39□□□□□ -1.07
RTFDC1-202ENST00000357348 KLK12Q9UKR0 248 aa8.39□□□□□ -1.07
RTFDC1-202ENST00000357348 TRBV7-4A0A0J9YYF1 115 aa8.39□□□□□ -1.07
RTFDC1-202ENST00000357348 NUPR2A6NF83 97 aa8.39□□□□□ -1.07
RTFDC1-202ENST00000357348 APLNQ9ULZ1 77 aa8.39□□□□□ -1.07
RTFDC1-202ENST00000357348 SERP1Q9Y6X1 66 aa8.39□□□□□ -1.07
RTFDC1-202ENST00000357348 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.38□□□□□ -1.07
RTFDC1-202ENST00000357348 PRR34Q9NV39 138 aa8.38□□□□□ -1.07
RTFDC1-202ENST00000357348 TRBV7-6A0A0J9YX20 115 aa8.37□□□□□ -1.07
RTFDC1-202ENST00000357348 HAMPP81172 84 aa8.37□□□□□ -1.07
RTFDC1-202ENST00000357348 UBE2DNLQ8IWF7 75 aa8.36□□□□□ -1.07
RTFDC1-202ENST00000357348 DIRC1Q969H9 104 aa8.36□□□□□ -1.07
RTFDC1-202ENST00000357348 DNAH1Q9P2D7 4330 aa8.35□□□□□ -1.07
RTFDC1-202ENST00000357348 ELOF1P60002 83 aaKnown RBP8.34□□□□□ -1.07
RTFDC1-202ENST00000357348 HRCT1Q6UXD1 115 aa8.34□□□□□ -1.07
RTFDC1-202ENST00000357348 C6orf48Q9UBA6 75 aa8.33□□□□□ -1.08
RTFDC1-202ENST00000357348 ZNF73O43830 326 aaPredicted RBP8.33□□□□□ -1.08
RTFDC1-202ENST00000357348 COX7BP24311 80 aa8.33□□□□□ -1.08
RTFDC1-202ENST00000357348 WWC2-AS2Q96NR7 200 aa8.33□□□□□ -1.08
RTFDC1-202ENST00000357348 NDUFC1O43677 76 aa8.31□□□□□ -1.08
RTFDC1-202ENST00000357348 LINC01556Q5JQF7 62 aa8.31□□□□□ -1.08
RTFDC1-202ENST00000357348 RMI2Q96E14 147 aa8.31□□□□□ -1.08
RTFDC1-202ENST00000357348 ERC2-IT1O76042 136 aa8.3□□□□□ -1.08
RTFDC1-202ENST00000357348 DNAH10OSP0CZ25 163 aa8.3□□□□□ -1.08
RTFDC1-202ENST00000357348 VPREB1P12018 145 aa8.3□□□□□ -1.08
RTFDC1-202ENST00000357348 ATP5EP56381 51 aaPredicted RBP8.29□□□□□ -1.08
RTFDC1-202ENST00000357348 SNURFQ9Y675 71 aa8.29□□□□□ -1.08
RTFDC1-202ENST00000357348 DNAH10Q8IVF4 4471 aa8.28□□□□□ -1.08
RTFDC1-202ENST00000357348 F8WEM9 126 aa8.28□□□□□ -1.08
RTFDC1-202ENST00000357348 CASC10Q5T4H9 136 aa8.27□□□□□ -1.08
RTFDC1-202ENST00000357348 LINC00528Q8N1L1 170 aa8.27□□□□□ -1.08
RTFDC1-202ENST00000357348 KRTAP1-5Q9BYS1 174 aa8.27□□□□□ -1.08
RTFDC1-202ENST00000357348 XAGE1AQ9HD64 81 aa8.27□□□□□ -1.08
RTFDC1-202ENST00000357348 IGKV2D-24A0A075B6R9 120 aa8.27□□□□□ -1.09
RTFDC1-202ENST00000357348 SMIM26A0A096LP01 95 aa8.27□□□□□ -1.09
RTFDC1-202ENST00000357348 VPS13DQ5THJ4 4388 aa8.26□□□□□ -1.09
RTFDC1-202ENST00000357348 M0R378 163 aa8.26□□□□□ -1.09
RTFDC1-202ENST00000357348 KMT2AQ03164 3969 aa8.26□□□□□ -1.09
RTFDC1-202ENST00000357348 NREPQ16612 68 aa8.25□□□□□ -1.09
RTFDC1-202ENST00000357348 KRTAP26-1Q6PEX3 210 aa8.25□□□□□ -1.09
RTFDC1-202ENST00000357348 FP248Q71RG6 208 aaPredicted RBP8.25□□□□□ -1.09
RTFDC1-202ENST00000357348 SCXQ7RTU7 201 aa8.25□□□□□ -1.09
RTFDC1-202ENST00000357348 LY6G6CO95867 125 aa8.24□□□□□ -1.09
RTFDC1-202ENST00000357348 C1orf43Q9BWL3 253 aa8.24□□□□□ -1.09
RTFDC1-202ENST00000357348 BPY2O14599 106 aa8.23□□□□□ -1.09
RTFDC1-202ENST00000357348 IGKV4-1P06312 121 aa8.23□□□□□ -1.09
RTFDC1-202ENST00000357348 HIGD2BQ4VC39 106 aa8.23□□□□□ -1.09
RTFDC1-202ENST00000357348 TMEM254Q8TBM7 123 aa8.23□□□□□ -1.09
RTFDC1-202ENST00000357348 OCR1Q9BZK8 76 aa8.22□□□□□ -1.09
RTFDC1-202ENST00000357348 CAMK2N2Q96S95 79 aa8.21□□□□□ -1.09
RTFDC1-202ENST00000357348 HYDINQ4G0P3 5121 aa8.21□□□□□ -1.1
RTFDC1-202ENST00000357348 A0A0U1RQV1 116 aa8.2□□□□□ -1.1
RTFDC1-202ENST00000357348 NBDYA0A0U1RRE5 68 aa8.19□□□□□ -1.1
RTFDC1-202ENST00000357348 Q6ZRU5 148 aa8.19□□□□□ -1.1
RTFDC1-202ENST00000357348 PRO0628Q9UI54 55 aa8.19□□□□□ -1.1
RTFDC1-202ENST00000357348 LINC00336Q6ZUF6 198 aa8.19□□□□□ -1.1
RTFDC1-202ENST00000357348 C15orf56Q8N910 161 aa8.19□□□□□ -1.1
RTFDC1-202ENST00000357348 F8WDY8 70 aa8.18□□□□□ -1.1
RTFDC1-202ENST00000357348 C3orf84H3BNL1 204 aa8.18□□□□□ -1.1
RTFDC1-202ENST00000357348 A0A1B0GW54 56 aa8.18□□□□□ -1.1
RTFDC1-202ENST00000357348 IGLV5-48A0A075B6I7 105 aa8.17□□□□□ -1.1
RTFDC1-202ENST00000357348 LINC00476Q8WZB0 136 aa8.17□□□□□ -1.1
RTFDC1-202ENST00000357348 KCNQ1DNQ9H478 68 aa8.17□□□□□ -1.1
RTFDC1-202ENST00000357348 PSCAO43653 123 aa8.16□□□□□ -1.1
RTFDC1-202ENST00000357348 Q8N9L7 120 aa8.16□□□□□ -1.1
RTFDC1-202ENST00000357348 DNAH2Q9P225 4427 aa8.16□□□□□ -1.1
RTFDC1-202ENST00000357348 PRYO14603 147 aa8.15□□□□□ -1.1
RTFDC1-202ENST00000357348 Q6ZRP5 223 aa8.14□□□□□ -1.11
RTFDC1-202ENST00000357348 Q8N377 158 aa8.14□□□□□ -1.11
RTFDC1-202ENST00000357348 LINC00474Q9P2X8 69 aa8.14□□□□□ -1.11
RTFDC1-202ENST00000357348 LCE6AA0A183 80 aa8.14□□□□□ -1.11
RTFDC1-202ENST00000357348 TNP2Q05952 138 aa8.11□□□□□ -1.11
RTFDC1-202ENST00000357348 ALMS1Q8TCU4 4167 aa8.11□□□□□ -1.11
RTFDC1-202ENST00000357348 PLA2G2DQ9UNK4 145 aa8.11□□□□□ -1.11
RTFDC1-202ENST00000357348 SYCNQ0VAF6 134 aa8.1□□□□□ -1.11
RTFDC1-202ENST00000357348 C7orf33Q8WU49 177 aa8.1□□□□□ -1.11
RTFDC1-202ENST00000357348 A0A1W2PNM2 257 aa8.09□□□□□ -1.11
RTFDC1-202ENST00000357348 KRTAP4-16G5E9R7 235 aaPredicted RBP8.09□□□□□ -1.11
RTFDC1-202ENST00000357348 FUSP35637 526 aaKnown RBP eCLIP8.09□□□□□ -1.11
RTFDC1-202ENST00000357348 Q6ZR54 194 aa8.09□□□□□ -1.11
RTFDC1-202ENST00000357348 DHRS4-AS1Q9P1J3 65 aa8.09□□□□□ -1.11
RTFDC1-202ENST00000357348 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.09□□□□□ -1.12
RTFDC1-202ENST00000357348 TLX1NBP0CAT3 122 aa8.09□□□□□ -1.12
RTFDC1-202ENST00000357348 FAM229BQ4G0N7 80 aa8.09□□□□□ -1.12
RTFDC1-202ENST00000357348 SACSQ9NZJ4 4579 aa8.08□□□□□ -1.12
RTFDC1-202ENST00000357348 SERTAD4-AS1Q5TG53 156 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms