RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 NSD1Q96L73 2696 aaPredicted RBP10.44□□□□□ -0.74
RTN3-205ENST00000356000 SETD2Q9BYW2 2564 aaPredicted RBP10.44□□□□□ -0.74
RTN3-205ENST00000356000 CLPSL2Q6UWE3 100 aa10.44□□□□□ -0.74
RTN3-205ENST00000356000 WNK1Q9H4A3 2382 aa10.43□□□□□ -0.74
RTN3-205ENST00000356000 FBN3Q75N90 2809 aa10.43□□□□□ -0.74
RTN3-205ENST00000356000 CDC42SE1Q9NRR8 79 aa10.43□□□□□ -0.74
RTN3-205ENST00000356000 HIVEP2P31629 2446 aa10.43□□□□□ -0.74
RTN3-205ENST00000356000 SPG11Q96JI7 2443 aa10.42□□□□□ -0.74
RTN3-205ENST00000356000 LOC101927531A0A1B0GV80 90 aa10.42□□□□□ -0.74
RTN3-205ENST00000356000 A6NED7 52 aa10.42□□□□□ -0.74
RTN3-205ENST00000356000 SLURP1P55000 103 aa10.42□□□□□ -0.74
RTN3-205ENST00000356000 CELSR1Q9NYQ6 3014 aa10.42□□□□□ -0.74
RTN3-205ENST00000356000 FN1P02751 2386 aaKnown RBP10.42□□□□□ -0.74
RTN3-205ENST00000356000 Q9BRP9 147 aa10.42□□□□□ -0.74
RTN3-205ENST00000356000 LINC00208Q96KT6 92 aa10.41□□□□□ -0.74
RTN3-205ENST00000356000 KRTAP24-1Q3LI83 254 aa10.41□□□□□ -0.74
RTN3-205ENST00000356000 H3BS24 57 aa10.4□□□□□ -0.74
RTN3-205ENST00000356000 A0A1B0GW54 56 aa10.39□□□□□ -0.75
RTN3-205ENST00000356000 MTORP42345 2549 aa10.39□□□□□ -0.75
RTN3-205ENST00000356000 UNQ6190/PRO20217Q6UXQ8 127 aa10.39□□□□□ -0.75
RTN3-205ENST00000356000 A0A0J9YWU9 116 aa10.38□□□□□ -0.75
RTN3-205ENST00000356000 SPANXA2-OT1Q8N9U9 137 aa10.38□□□□□ -0.75
RTN3-205ENST00000356000 B4DSR2 109 aa10.38□□□□□ -0.75
RTN3-205ENST00000356000 KHDC1LQ5JSQ8 128 aa10.38□□□□□ -0.75
RTN3-205ENST00000356000 CSMD2Q7Z408 3487 aa10.38□□□□□ -0.75
RTN3-205ENST00000356000 ODF3L2Q3SX64 289 aa10.37□□□□□ -0.75
RTN3-205ENST00000356000 LINC00528Q8N1L1 170 aa10.37□□□□□ -0.75
RTN3-205ENST00000356000 CHCHD10Q8WYQ3 142 aaPredicted RBP10.37□□□□□ -0.75
RTN3-205ENST00000356000 C16orf74Q96GX8 76 aa10.37□□□□□ -0.75
RTN3-205ENST00000356000 DSCR10P59022 87 aa10.36□□□□□ -0.75
RTN3-205ENST00000356000 MOBPQ13875 183 aa10.36□□□□□ -0.75
RTN3-205ENST00000356000 MAPK1IP1LQ8NDC0 245 aa10.36□□□□□ -0.75
RTN3-205ENST00000356000 KCNQ1DNQ9H478 68 aa10.36□□□□□ -0.75
RTN3-205ENST00000356000 DEFB136Q30KP8 78 aa10.35□□□□□ -0.75
RTN3-205ENST00000356000 IGLV5-48A0A075B6I7 105 aa10.34□□□□□ -0.75
RTN3-205ENST00000356000 KPRPQ5T749 579 aaPredicted RBP10.33□□□□□ -0.76
RTN3-205ENST00000356000 ACANP16112 2415 aa10.33□□□□□ -0.76
RTN3-205ENST00000356000 K7EQZ3 153 aa10.33□□□□□ -0.76
RTN3-205ENST00000356000 MP68P56378 58 aa10.33□□□□□ -0.76
RTN3-205ENST00000356000 C18orf65Q6ZTR6 163 aa10.33□□□□□ -0.76
RTN3-205ENST00000356000 VPREB1P12018 145 aa10.32□□□□□ -0.76
RTN3-205ENST00000356000 SPAG11BQ08648 103 aa10.32□□□□□ -0.76
RTN3-205ENST00000356000 IGLV10-54A0A075B6I4 117 aa10.32□□□□□ -0.76
RTN3-205ENST00000356000 NKAPP1Q8N9T2 125 aa10.31□□□□□ -0.76
RTN3-205ENST00000356000 A0A1W2PNM2 257 aa10.31□□□□□ -0.76
RTN3-205ENST00000356000 MSMBP08118 114 aa10.3□□□□□ -0.76
RTN3-205ENST00000356000 XAGE1AQ9HD64 81 aa10.29□□□□□ -0.76
RTN3-205ENST00000356000 NOTCH3Q9UM47 2321 aa10.29□□□□□ -0.76
RTN3-205ENST00000356000 GVQW2A0A096LPI5 108 aaPredicted RBP10.29□□□□□ -0.76
RTN3-205ENST00000356000 GIG44P09565 113 aaPredicted RBP10.28□□□□□ -0.76
RTN3-205ENST00000356000 MAP1AP78559 2803 aaPredicted RBP10.28□□□□□ -0.76
RTN3-205ENST00000356000 ZNF469Q96JG9 3925 aaPredicted RBP10.28□□□□□ -0.76
RTN3-205ENST00000356000 DNHD1Q96M86 4753 aa10.27□□□□□ -0.76
RTN3-205ENST00000356000 REG3AQ06141 175 aa10.27□□□□□ -0.76
RTN3-205ENST00000356000 CSNK1G2-AS1Q8NCQ2 148 aa10.27□□□□□ -0.76
RTN3-205ENST00000356000 ANK3Q12955 4377 aaKnown RBP10.27□□□□□ -0.77
RTN3-205ENST00000356000 Q8N377 158 aa10.27□□□□□ -0.77
RTN3-205ENST00000356000 NIPBLQ6KC79 2804 aaeCLIP10.26□□□□□ -0.77
RTN3-205ENST00000356000 GYPEP15421 78 aa10.26□□□□□ -0.77
RTN3-205ENST00000356000 WFDC10AQ9H1F0 79 aa10.26□□□□□ -0.77
RTN3-205ENST00000356000 DEFB112Q30KQ8 113 aa10.24□□□□□ -0.77
RTN3-205ENST00000356000 CSPG4Q6UVK1 2322 aa10.24□□□□□ -0.77
RTN3-205ENST00000356000 Q8NBF4 154 aa10.24□□□□□ -0.77
RTN3-205ENST00000356000 H3BPC8 53 aa10.23□□□□□ -0.77
RTN3-205ENST00000356000 FSHBP01225 129 aa10.23□□□□□ -0.77
RTN3-205ENST00000356000 ANGP03950 147 aaKnown RBP10.23□□□□□ -0.77
RTN3-205ENST00000356000 SPRR4Q96PI1 79 aa10.23□□□□□ -0.77
RTN3-205ENST00000356000 C6orf48Q9UBA6 75 aa10.23□□□□□ -0.77
RTN3-205ENST00000356000 COA5Q86WW8 74 aa10.22□□□□□ -0.77
RTN3-205ENST00000356000 DEFB105AQ8NG35 78 aa10.22□□□□□ -0.77
RTN3-205ENST00000356000 ZNF702PQ9H963 129 aa10.22□□□□□ -0.77
RTN3-205ENST00000356000 PLAC8Q9NZF1 115 aa10.22□□□□□ -0.77
RTN3-205ENST00000356000 LINC01558Q9Y6Z2 57 aa10.21□□□□□ -0.78
RTN3-205ENST00000356000 C1orf137Q5JT78 98 aa10.2□□□□□ -0.78
RTN3-205ENST00000356000 LINC00313P59037 77 aa10.2□□□□□ -0.78
RTN3-205ENST00000356000 TNP2Q05952 138 aa10.2□□□□□ -0.78
RTN3-205ENST00000356000 C9orf163Q8N9P6 203 aa10.2□□□□□ -0.78
RTN3-205ENST00000356000 A0A096LPF7 62 aa10.19□□□□□ -0.78
RTN3-205ENST00000356000 C4orf3Q8WVX3 66 aa10.19□□□□□ -0.78
RTN3-205ENST00000356000 IGKV2D-24A0A075B6R9 120 aa10.18□□□□□ -0.78
RTN3-205ENST00000356000 H0Y9P7 68 aa10.17□□□□□ -0.78
RTN3-205ENST00000356000 LINC01554Q52M75 96 aa10.17□□□□□ -0.78
RTN3-205ENST00000356000 ANK2Q01484 3957 aa10.17□□□□□ -0.78
RTN3-205ENST00000356000 DEFB116Q30KQ4 102 aa10.16□□□□□ -0.78
RTN3-205ENST00000356000 DEFB130BP0DP73 79 aa10.16□□□□□ -0.78
RTN3-205ENST00000356000 DEFB130AP0DP74 79 aa10.16□□□□□ -0.78
RTN3-205ENST00000356000 WFDC13Q8IUB5 93 aa10.16□□□□□ -0.78
RTN3-205ENST00000356000 SPINK7P58062 85 aa10.14□□□□□ -0.79
RTN3-205ENST00000356000 PRAC1Q96KF2 57 aa10.14□□□□□ -0.79
RTN3-205ENST00000356000 FBN1P35555 2871 aaKnown RBP10.13□□□□□ -0.79
RTN3-205ENST00000356000 PRR26Q8N8Z3 221 aa10.13□□□□□ -0.79
RTN3-205ENST00000356000 PRO0255Q9UI72 69 aa10.13□□□□□ -0.79
RTN3-205ENST00000356000 IGLV7-46A0A075B6I9 117 aa10.12□□□□□ -0.79
RTN3-205ENST00000356000 DNAJC9-AS1A6NH13 148 aa10.12□□□□□ -0.79
RTN3-205ENST00000356000 KRTAP29-1A8MX34 341 aaPredicted RBP10.12□□□□□ -0.79
RTN3-205ENST00000356000 CNBPP62633 177 aaKnown RBP10.12□□□□□ -0.79
RTN3-205ENST00000356000 CASC2Q6XLA1 102 aa10.12□□□□□ -0.79
RTN3-205ENST00000356000 C7orf33Q8WU49 177 aa10.11□□□□□ -0.79
RTN3-205ENST00000356000 JMJD1CQ15652 2540 aa10.1□□□□□ -0.79
RTN3-205ENST00000356000 COL6A5A8TX70 2615 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 181.2 ms