RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 TACC2O95359 2948 aa6.45□□□□□ -1.38
GABPA-201ENST00000354828 PRR34Q9NV39 138 aa6.45□□□□□ -1.38
GABPA-201ENST00000354828 ZZEF1O43149 2961 aa6.44□□□□□ -1.38
GABPA-201ENST00000354828 C9orf163Q8N9P6 203 aa6.44□□□□□ -1.38
GABPA-201ENST00000354828 MT-ATP8P03928 68 aa6.44□□□□□ -1.38
GABPA-201ENST00000354828 ITPR1Q14643 2758 aa6.43□□□□□ -1.38
GABPA-201ENST00000354828 SERP1Q9Y6X1 66 aa6.43□□□□□ -1.38
GABPA-201ENST00000354828 ELOF1P60002 83 aaKnown RBP6.43□□□□□ -1.38
GABPA-201ENST00000354828 ST20-AS1Q8NBB2 130 aa6.43□□□□□ -1.38
GABPA-201ENST00000354828 SERTAD4-AS1Q5TG53 156 aa6.43□□□□□ -1.38
GABPA-201ENST00000354828 ZNF575Q86XF7 245 aa6.43□□□□□ -1.38
GABPA-201ENST00000354828 SPTSSBQ8NFR3 76 aa6.43□□□□□ -1.38
GABPA-201ENST00000354828 LINC00208Q96KT6 92 aa6.43□□□□□ -1.38
GABPA-201ENST00000354828 TNP2Q05952 138 aa6.42□□□□□ -1.38
GABPA-201ENST00000354828 C15orf56Q8N910 161 aa6.42□□□□□ -1.38
GABPA-201ENST00000354828 SOSTDC1Q6X4U4 206 aa6.42□□□□□ -1.38
GABPA-201ENST00000354828 NBEAL1Q6ZS30 2694 aa6.42□□□□□ -1.38
GABPA-201ENST00000354828 IGKV2D-30A0A075B6S6 120 aa6.42□□□□□ -1.38
GABPA-201ENST00000354828 IGKV2-30P06310 120 aa6.42□□□□□ -1.38
GABPA-201ENST00000354828 NBEAQ8NFP9 2946 aa6.42□□□□□ -1.38
GABPA-201ENST00000354828 TRBV7-6A0A0J9YX20 115 aa6.41□□□□□ -1.38
GABPA-201ENST00000354828 WIPF1O43516 503 aa6.41□□□□□ -1.38
GABPA-201ENST00000354828 LINC00528Q8N1L1 170 aa6.41□□□□□ -1.38
GABPA-201ENST00000354828 HCG22E2RYF7 251 aa6.41□□□□□ -1.38
GABPA-201ENST00000354828 VPREB1P12018 145 aa6.41□□□□□ -1.38
GABPA-201ENST00000354828 CDIP1Q9H305 208 aa6.41□□□□□ -1.38
GABPA-201ENST00000354828 SNURFQ9Y675 71 aa6.41□□□□□ -1.38
GABPA-201ENST00000354828 K7ERS5 55 aa6.4□□□□□ -1.38
GABPA-201ENST00000354828 HIVEP1P15822 2718 aa6.4□□□□□ -1.39
GABPA-201ENST00000354828 SPINK1P00995 79 aa6.4□□□□□ -1.39
GABPA-201ENST00000354828 SPEGQ15772 3267 aa6.39□□□□□ -1.39
GABPA-201ENST00000354828 ZNF861PO60384 105 aa6.39□□□□□ -1.39
GABPA-201ENST00000354828 LINC00304Q8N9R0 145 aa6.39□□□□□ -1.39
GABPA-201ENST00000354828 PCOTHQ58A44 107 aa6.38□□□□□ -1.39
GABPA-201ENST00000354828 IGLV1-50A0A075B6I6 118 aa6.38□□□□□ -1.39
GABPA-201ENST00000354828 ATP11AUNQ6ZP68 121 aa6.38□□□□□ -1.39
GABPA-201ENST00000354828 PRR15LQ9BU68 103 aa6.37□□□□□ -1.39
GABPA-201ENST00000354828 COX6B2Q6YFQ2 88 aa6.36□□□□□ -1.39
GABPA-201ENST00000354828 UTP20O75691 2785 aaKnown RBP6.36□□□□□ -1.39
GABPA-201ENST00000354828 UQCRQO14949 82 aa6.36□□□□□ -1.39
GABPA-201ENST00000354828 LINC00313P59037 77 aa6.36□□□□□ -1.39
GABPA-201ENST00000354828 APCP25054 2843 aa6.35□□□□□ -1.39
GABPA-201ENST00000354828 Q96NJ1 140 aa6.35□□□□□ -1.39
GABPA-201ENST00000354828 IMUPQ9GZP8 106 aa6.35□□□□□ -1.39
GABPA-201ENST00000354828 SERP2Q8N6R1 65 aa6.35□□□□□ -1.39
GABPA-201ENST00000354828 A0A087WVE0 104 aa6.35□□□□□ -1.39
GABPA-201ENST00000354828 H0Y9P7 68 aa6.34□□□□□ -1.39
GABPA-201ENST00000354828 IGLV7-43P04211 117 aa6.34□□□□□ -1.39
GABPA-201ENST00000354828 SPAG11AQ6PDA7 123 aa6.34□□□□□ -1.39
GABPA-201ENST00000354828 PSORS1C2Q9UIG4 136 aa6.34□□□□□ -1.39
GABPA-201ENST00000354828 USP34Q70CQ2 3546 aa6.34□□□□□ -1.39
GABPA-201ENST00000354828 hDV103S1A0JD37 113 aa6.34□□□□□ -1.4
GABPA-201ENST00000354828 CNBPP62633 177 aaKnown RBP6.34□□□□□ -1.4
GABPA-201ENST00000354828 C9orf129Q5T035 196 aaKnown RBP6.34□□□□□ -1.4
GABPA-201ENST00000354828 FAM240AA0A1B0GVK7 77 aa6.33□□□□□ -1.4
GABPA-201ENST00000354828 IGLV6-57P01721 117 aa6.33□□□□□ -1.4
GABPA-201ENST00000354828 A0A1W2PNN7 141 aa6.33□□□□□ -1.4
GABPA-201ENST00000354828 KCNQ1DNQ9H478 68 aa6.33□□□□□ -1.4
GABPA-201ENST00000354828 FAM218AQ96MZ4 157 aa6.32□□□□□ -1.4
GABPA-201ENST00000354828 NDUFC1O43677 76 aa6.32□□□□□ -1.4
GABPA-201ENST00000354828 LINC00846Q9NV44 126 aa6.32□□□□□ -1.4
GABPA-201ENST00000354828 ANAPC11Q9NYG5 84 aa6.32□□□□□ -1.4
GABPA-201ENST00000354828 MPLKIPQ8TAP9 179 aa6.32□□□□□ -1.4
GABPA-201ENST00000354828 LOC400499M0QZD8 3231 aa6.31□□□□□ -1.4
GABPA-201ENST00000354828 TLX1NBP0CAT3 122 aa6.31□□□□□ -1.4
GABPA-201ENST00000354828 NSD1Q96L73 2696 aaPredicted RBP6.31□□□□□ -1.4
GABPA-201ENST00000354828 SSBP3-AS1Q7Z2R9 100 aa6.31□□□□□ -1.4
GABPA-201ENST00000354828 LRBAP50851 2863 aa6.29□□□□□ -1.4
GABPA-201ENST00000354828 LCE6AA0A183 80 aa6.29□□□□□ -1.4
GABPA-201ENST00000354828 TRAV7A0A075B6U4 112 aa6.28□□□□□ -1.4
GABPA-201ENST00000354828 C9orf92A6NGG3 77 aa6.28□□□□□ -1.4
GABPA-201ENST00000354828 C7orf65Q6ZTY9 151 aa6.28□□□□□ -1.4
GABPA-201ENST00000354828 A0A1B0GW54 56 aa6.27□□□□□ -1.41
GABPA-201ENST00000354828 C1orf64Q8NEQ6 169 aa6.26□□□□□ -1.41
GABPA-201ENST00000354828 LITAFQ99732 161 aa6.26□□□□□ -1.41
GABPA-201ENST00000354828 PLA2G2DQ9UNK4 145 aa6.26□□□□□ -1.41
GABPA-201ENST00000354828 TP53AIP1Q9HCN2 124 aa6.25□□□□□ -1.41
GABPA-201ENST00000354828 MUC3AQ02505 3323 aa6.25□□□□□ -1.41
GABPA-201ENST00000354828 CXCL6P80162 114 aa6.25□□□□□ -1.41
GABPA-201ENST00000354828 COX7CP15954 63 aa6.25□□□□□ -1.41
GABPA-201ENST00000354828 ATP5EP56381 51 aaPredicted RBP6.25□□□□□ -1.41
GABPA-201ENST00000354828 SMIM29Q86T20 159 aa6.25□□□□□ -1.41
GABPA-201ENST00000354828 CFAP47Q6ZTR5 3102 aa6.25□□□□□ -1.41
GABPA-201ENST00000354828 MYO15AQ9UKN7 3530 aa6.24□□□□□ -1.41
GABPA-201ENST00000354828 ZANQ9Y493 2812 aa6.24□□□□□ -1.41
GABPA-201ENST00000354828 TRBV7-4A0A0J9YYF1 115 aa6.24□□□□□ -1.41
GABPA-201ENST00000354828 Q6ZQT0 140 aa6.23□□□□□ -1.41
GABPA-201ENST00000354828 C8orf87E5RJ46 101 aa6.23□□□□□ -1.41
GABPA-201ENST00000354828 OBSCN-AS1Q96MR7 158 aa6.23□□□□□ -1.41
GABPA-201ENST00000354828 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.23□□□□□ -1.41
GABPA-201ENST00000354828 V9GYY9 64 aa6.23□□□□□ -1.41
GABPA-201ENST00000354828 NBEAL2Q6ZNJ1 2754 aa6.22□□□□□ -1.41
GABPA-201ENST00000354828 TRBV7-7A0A0K0K1E9 115 aa6.22□□□□□ -1.41
GABPA-201ENST00000354828 IGFL1Q6UW32 110 aa6.22□□□□□ -1.41
GABPA-201ENST00000354828 SPRR4Q96PI1 79 aa6.22□□□□□ -1.41
GABPA-201ENST00000354828 DSCR10P59022 87 aa6.21□□□□□ -1.42
GABPA-201ENST00000354828 LOC110117498A0A087WWA1 95 aa6.21□□□□□ -1.42
GABPA-201ENST00000354828 A6NED7 52 aa6.2□□□□□ -1.42
GABPA-201ENST00000354828 EIF4EBP3O60516 100 aaPredicted RBP6.2□□□□□ -1.42
GABPA-201ENST00000354828 A0A0G2JQZ4 141 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms