RNA–Protein interactions for RNA: ENST00000354749.6

TTC3-201, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 9,084 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-201ENST00000354749 PRR34Q9NV39 138 aa4.33□□□□□ -1.72
TTC3-201ENST00000354749 CSNK1G2-AS1Q8NCQ2 148 aa4.33□□□□□ -1.72
TTC3-201ENST00000354749 C8orf17Q9NRJ1 99 aa4.33□□□□□ -1.72
TTC3-201ENST00000354749 MIR22HGQ0VDD5 57 aa4.32□□□□□ -1.72
TTC3-201ENST00000354749 CHTF8P0CG12 524 aa4.32□□□□□ -1.72
TTC3-201ENST00000354749 Q96NJ1 140 aa4.32□□□□□ -1.72
TTC3-201ENST00000354749 SPANXA2-OT1Q8N9U9 137 aa4.32□□□□□ -1.72
TTC3-201ENST00000354749 A0A1B0GVX0 72 aa4.32□□□□□ -1.72
TTC3-201ENST00000354749 TYMSOSQ8TAI1 123 aa4.31□□□□□ -1.72
TTC3-201ENST00000354749 FLNAP21333 2647 aaKnown RBP4.31□□□□□ -1.72
TTC3-201ENST00000354749 C15orf56Q8N910 161 aa4.31□□□□□ -1.72
TTC3-201ENST00000354749 OBSCN-AS1Q96MR7 158 aa4.3□□□□□ -1.72
TTC3-201ENST00000354749 LINC00612Q8N6U2 182 aa4.3□□□□□ -1.72
TTC3-201ENST00000354749 CRIPTQ9P021 101 aa4.3□□□□□ -1.72
TTC3-201ENST00000354749 CENPEQ02224 2701 aa4.29□□□□□ -1.72
TTC3-201ENST00000354749 C9orf129Q5T035 196 aaKnown RBP4.29□□□□□ -1.72
TTC3-201ENST00000354749 PLA2G2DQ9UNK4 145 aa4.29□□□□□ -1.72
TTC3-201ENST00000354749 CDC42SE1Q9NRR8 79 aa4.29□□□□□ -1.72
TTC3-201ENST00000354749 TLX1NBP0CAT3 122 aa4.29□□□□□ -1.72
TTC3-201ENST00000354749 LCA10Q71F78 164 aa4.29□□□□□ -1.72
TTC3-201ENST00000354749 Q8N377 158 aa4.29□□□□□ -1.72
TTC3-201ENST00000354749 DSCR10P59022 87 aa4.27□□□□□ -1.73
TTC3-201ENST00000354749 Q1T7F1 81 aa4.26□□□□□ -1.73
TTC3-201ENST00000354749 GIG44P09565 113 aaPredicted RBP4.26□□□□□ -1.73
TTC3-201ENST00000354749 KRTAP24-1Q3LI83 254 aa4.26□□□□□ -1.73
TTC3-201ENST00000354749 CENPFP49454 3210 aa4.25□□□□□ -1.73
TTC3-201ENST00000354749 WIPF1O43516 503 aa4.25□□□□□ -1.73
TTC3-201ENST00000354749 ZNF861PO60384 105 aa4.25□□□□□ -1.73
TTC3-201ENST00000354749 IGLV5-48A0A075B6I7 105 aa4.24□□□□□ -1.73
TTC3-201ENST00000354749 LINC00304Q8N9R0 145 aa4.24□□□□□ -1.73
TTC3-201ENST00000354749 APLNQ9ULZ1 77 aa4.24□□□□□ -1.73
TTC3-201ENST00000354749 A0A1W2PNM2 257 aa4.24□□□□□ -1.73
TTC3-201ENST00000354749 SRCAPQ6ZRS2 3230 aa4.24□□□□□ -1.73
TTC3-201ENST00000354749 OCR1Q9BZK8 76 aa4.23□□□□□ -1.73
TTC3-201ENST00000354749 FAM104AQ969W3 186 aa4.23□□□□□ -1.73
TTC3-201ENST00000354749 CNBPP62633 177 aaKnown RBP4.23□□□□□ -1.73
TTC3-201ENST00000354749 C19orf73Q9NVV2 129 aa4.22□□□□□ -1.73
TTC3-201ENST00000354749 SPRR4Q96PI1 79 aa4.22□□□□□ -1.73
TTC3-201ENST00000354749 IGLV5-37A0A075B6J1 123 aa4.21□□□□□ -1.73
TTC3-201ENST00000354749 A0A0G2JQZ4 141 aa4.21□□□□□ -1.73
TTC3-201ENST00000354749 A0A1W2PNN7 141 aa4.21□□□□□ -1.73
TTC3-201ENST00000354749 C9orf163Q8N9P6 203 aa4.21□□□□□ -1.74
TTC3-201ENST00000354749 ITPR3Q14573 2671 aa4.2□□□□□ -1.74
TTC3-201ENST00000354749 STAB1Q9NY15 2570 aa4.2□□□□□ -1.74
TTC3-201ENST00000354749 A0A096LNT2 108 aa4.2□□□□□ -1.74
TTC3-201ENST00000354749 KRTAP10-11P60412 298 aa4.19□□□□□ -1.74
TTC3-201ENST00000354749 Q75L30 129 aa4.19□□□□□ -1.74
TTC3-201ENST00000354749 NBEAL1Q6ZS30 2694 aa4.19□□□□□ -1.74
TTC3-201ENST00000354749 WWC2-AS2Q96NR7 200 aa4.19□□□□□ -1.74
TTC3-201ENST00000354749 TRANK1O15050 2925 aa4.19□□□□□ -1.74
TTC3-201ENST00000354749 HELZ2Q9BYK8 2649 aaKnown RBP4.19□□□□□ -1.74
TTC3-201ENST00000354749 IGLV7-43P04211 117 aa4.18□□□□□ -1.74
TTC3-201ENST00000354749 A0A087WTM6 91 aa4.18□□□□□ -1.74
TTC3-201ENST00000354749 GCN1Q92616 2671 aaKnown RBP4.17□□□□□ -1.74
TTC3-201ENST00000354749 NOTCH1P46531 2555 aa4.17□□□□□ -1.74
TTC3-201ENST00000354749 K7EIL1 84 aa4.17□□□□□ -1.74
TTC3-201ENST00000354749 C9orf92A6NGG3 77 aa4.17□□□□□ -1.74
TTC3-201ENST00000354749 PSORS1C2Q9UIG4 136 aa4.17□□□□□ -1.74
TTC3-201ENST00000354749 COX6B2Q6YFQ2 88 aa4.16□□□□□ -1.74
TTC3-201ENST00000354749 IGLV7-46A0A075B6I9 117 aa4.16□□□□□ -1.74
TTC3-201ENST00000354749 Q8N1X5 172 aa4.16□□□□□ -1.74
TTC3-201ENST00000354749 RBM12B-AS1Q9P1G2 102 aa4.15□□□□□ -1.74
TTC3-201ENST00000354749 CR1P17927 2039 aa4.15□□□□□ -1.75
TTC3-201ENST00000354749 Q5XG85 94 aa4.15□□□□□ -1.75
TTC3-201ENST00000354749 ANAPC11Q9NYG5 84 aa4.15□□□□□ -1.75
TTC3-201ENST00000354749 A0A0D9SG42 100 aa4.14□□□□□ -1.75
TTC3-201ENST00000354749 ZNF575Q86XF7 245 aa4.14□□□□□ -1.75
TTC3-201ENST00000354749 CASC10Q5T4H9 136 aa4.14□□□□□ -1.75
TTC3-201ENST00000354749 PRR26Q8N8Z3 221 aa4.13□□□□□ -1.75
TTC3-201ENST00000354749 UNC79Q9P2D8 2635 aa4.13□□□□□ -1.75
TTC3-201ENST00000354749 BPTFQ12830 3046 aa4.13□□□□□ -1.75
TTC3-201ENST00000354749 J3QL48 77 aa4.13□□□□□ -1.75
TTC3-201ENST00000354749 AKAP13Q12802 2813 aa4.12□□□□□ -1.75
TTC3-201ENST00000354749 LINC01554Q52M75 96 aa4.12□□□□□ -1.75
TTC3-201ENST00000354749 LINC01558Q9Y6Z2 57 aa4.12□□□□□ -1.75
TTC3-201ENST00000354749 KRTAP10-3P60369 221 aa4.11□□□□□ -1.75
TTC3-201ENST00000354749 Q8N9P0 234 aaPredicted RBP4.11□□□□□ -1.75
TTC3-201ENST00000354749 FLG2Q5D862 2391 aaPredicted RBP4.11□□□□□ -1.75
TTC3-201ENST00000354749 LUZP6Q538Z0 58 aa4.11□□□□□ -1.75
TTC3-201ENST00000354749 CFAP46Q8IYW2 2715 aa4.11□□□□□ -1.75
TTC3-201ENST00000354749 A0A1B0GU33 70 aa4.11□□□□□ -1.75
TTC3-201ENST00000354749 HRES1P13985 223 aa4.11□□□□□ -1.75
TTC3-201ENST00000354749 FP248Q71RG6 208 aaPredicted RBP4.11□□□□□ -1.75
TTC3-201ENST00000354749 MMP24-AS1A0A0U1RRL7 71 aa4.09□□□□□ -1.75
TTC3-201ENST00000354749 TEP1Q99973 2627 aaKnown RBP4.09□□□□□ -1.75
TTC3-201ENST00000354749 COL6A5A8TX70 2615 aa4.08□□□□□ -1.76
TTC3-201ENST00000354749 FAM229BQ4G0N7 80 aa4.08□□□□□ -1.76
TTC3-201ENST00000354749 CYSTM1Q9H1C7 97 aa4.08□□□□□ -1.76
TTC3-201ENST00000354749 CHD6Q8TD26 2715 aa4.08□□□□□ -1.76
TTC3-201ENST00000354749 Q5VV11 94 aa4.07□□□□□ -1.76
TTC3-201ENST00000354749 EP400Q96L91 3159 aa4.06□□□□□ -1.76
TTC3-201ENST00000354749 LINC00483Q53H64 154 aa4.06□□□□□ -1.76
TTC3-201ENST00000354749 SPRR1AP35321 89 aa4.06□□□□□ -1.76
TTC3-201ENST00000354749 SMR3BP02814 79 aaPredicted RBP4.04□□□□□ -1.76
TTC3-201ENST00000354749 DMAC1Q96GE9 116 aa4.04□□□□□ -1.76
TTC3-201ENST00000354749 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
TTC3-201ENST00000354749 KRTAP1-1Q07627 177 aa4.04□□□□□ -1.76
TTC3-201ENST00000354749 ZCCHC13Q8WW36 166 aaKnown RBP4.04□□□□□ -1.76
TTC3-201ENST00000354749 SPRR1BP22528 89 aa4.04□□□□□ -1.76
TTC3-201ENST00000354749 KRTAP1-3Q8IUG1 177 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms