RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 COL8A2P25067 703 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 RHOHQ15669 191 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 LINC01590Q5TEZ4 76 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 Q6ZS52 159 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 LYPD1Q8N2G4 141 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 SERP2Q8N6R1 65 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 TMEM167AQ8TBQ9 72 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 SMIM2Q9BVW6 85 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 HIGD1BQ9P298 99 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 CCL26Q9Y258 94 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 LHFPL6Q9Y693 200 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 PTPRBP23467 1997 aa0.84□□□□□ -2.28
BRCA1-202ENST00000354071 KIF20BQ96Q89 1820 aa0.84□□□□□ -2.28
BRCA1-202ENST00000354071 IGKV2-40A0A087WW87 121 aaPredicted RBP0.84□□□□□ -2.28
BRCA1-202ENST00000354071 SMIM27A0A1W2PRY6 76 aa0.84□□□□□ -2.28
BRCA1-202ENST00000354071 IGKV2D-40P01614 121 aaPredicted RBP0.84□□□□□ -2.28
BRCA1-202ENST00000354071 PDE6GP18545 87 aa0.84□□□□□ -2.28
BRCA1-202ENST00000354071 CD24P25063 80 aa0.84□□□□□ -2.28
BRCA1-202ENST00000354071 FXYD2P54710 66 aa0.84□□□□□ -2.28
BRCA1-202ENST00000354071 MRPS36P82909 103 aaKnown RBP0.84□□□□□ -2.28
BRCA1-202ENST00000354071 PRCDQ00LT1 54 aa0.84□□□□□ -2.28
BRCA1-202ENST00000354071 IGFL1Q6UW32 110 aa0.84□□□□□ -2.28
BRCA1-202ENST00000354071 TMEM14EPQ6UXP3 125 aa0.84□□□□□ -2.28
BRCA1-202ENST00000354071 IMUPQ9GZP8 106 aa0.84□□□□□ -2.28
BRCA1-202ENST00000354071 TRAV7A0A075B6U4 112 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 OOSP1A8MZH6 123 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 I3L3M4 83 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 CLPSP04118 112 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 DEFB109BQ30KR1 87 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 LHFPL1Q86WI0 220 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 DYNAPQ8N1N2 210 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 C9orf163Q8N9P6 203 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 GAFA1Q96PS6 74 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 SERP1Q9Y6X1 66 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 V9GYV3 84 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 DOCK2Q92608 1830 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 F5P12259 2224 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 SCN3AQ9NY46 2000 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 TEX49A0A1B0GTD5 131 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 CXorf51AA0A1B0GTR3 108 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 K7EMI3 77 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 NUPR1O60356 82 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 EFNA4P52798 201 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 ATP5EP2Q5VTU8 51 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 DEFB105AQ8NG35 78 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 COX7B2Q8TF08 81 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 CYYR1Q96J86 154 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 TRGV9Q99603 122 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 HIGD2AQ9BW72 106 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 KRTAP4-3Q9BYR4 195 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 AGPAT4-IT1Q9H0P7 198 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 PRO0461Q9UI25 63 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 DCHS2Q6V1P9 2916 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 ACANP16112 2415 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 APOBP04114 4563 aaKnown RBP0.83□□□□□ -2.28
BRCA1-202ENST00000354071 TRGV1A0A0A0MS02 117 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 SPTY2D1-AS1A0A0U1RR47 76 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 RBAKDNA6NC62 111 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 TCL1BO95988 128 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 HMGA1P17096 107 aaKnown RBP0.83□□□□□ -2.28
BRCA1-202ENST00000354071 BLCAPP62952 87 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 LRP2P98164 4655 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 TPRXLQ17RH7 258 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 MYO7BQ6PIF6 2116 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 ENHOQ6UWT2 76 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 Q86TA4 180 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 Q8TAT8 98 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 SNURFQ9Y675 71 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 STAB2Q8WWQ8 2551 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 TRBV27A0A0K0K1C4 114 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 LOC107984640A0A0U1RRK4 108 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 E7EQL1 145 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 IGKV4-1P06312 121 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 SAA2P0DJI9 122 aaPredicted RBP0.83□□□□□ -2.28
BRCA1-202ENST00000354071 P0DMU3 169 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 FAM231AP0DMU4 169 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 FAM231CP0DMU5 169 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 IGFL3Q6UXB1 125 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 CASC2Q6XLA1 102 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 NDUFA11Q86Y39 141 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 CLEC2BQ92478 149 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 LINC00526Q96FQ7 95 aa0.83□□□□□ -2.28
BRCA1-202ENST00000354071 NCKAP5O14513 1909 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 MACF1Q9UPN3 7388 aaKnown RBP0.82□□□□□ -2.28
BRCA1-202ENST00000354071 IGLV3-9A0A075B6K5 115 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 IGKV2D-26A0A0A0MRZ7 120 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 IGHV1-18A0A0C4DH31 117 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 Q6ZQT0 140 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 CPAMD8Q8IZJ3 1885 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 FAM216BQ8N7L0 139 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 SPACA4Q8TDM5 124 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 LINC00312Q9Y6C7 94 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 SPEF2Q9C093 1822 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 J3QRE1 110 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 PSCAO43653 123 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 IGLV6-57P01721 117 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 IFI6P09912 130 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 MIFP14174 115 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 DEFB112Q30KQ8 113 aa0.82□□□□□ -2.28
BRCA1-202ENST00000354071 COX14Q96I36 57 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms