RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 CASC10Q5T4H9 136 aa8.8□□□□□ -1
LMBR1-201ENST00000353442 KRTAP10-3P60369 221 aa8.8□□□□□ -1
LMBR1-201ENST00000353442 A0A1B0GW54 56 aa8.8□□□□□ -1
LMBR1-201ENST00000353442 PRR26Q8N8Z3 221 aa8.79□□□□□ -1
LMBR1-201ENST00000353442 FN1P02751 2386 aaKnown RBP8.78□□□□□ -1
LMBR1-201ENST00000353442 TLX1NBP0CAT3 122 aa8.78□□□□□ -1
LMBR1-201ENST00000353442 TNP2Q05952 138 aa8.77□□□□□ -1.01
LMBR1-201ENST00000353442 FAM104AQ969W3 186 aa8.76□□□□□ -1.01
LMBR1-201ENST00000353442 KCNQ1DNQ9H478 68 aa8.74□□□□□ -1.01
LMBR1-201ENST00000353442 LINC00612Q8N6U2 182 aa8.74□□□□□ -1.01
LMBR1-201ENST00000353442 Q8N377 158 aa8.72□□□□□ -1.01
LMBR1-201ENST00000353442 C19orf73Q9NVV2 129 aa8.72□□□□□ -1.01
LMBR1-201ENST00000353442 C9orf163Q8N9P6 203 aa8.71□□□□□ -1.02
LMBR1-201ENST00000353442 SRCAPQ6ZRS2 3230 aa8.71□□□□□ -1.02
LMBR1-201ENST00000353442 COL4A2P08572 1712 aa8.7□□□□□ -1.02
LMBR1-201ENST00000353442 SPRR4Q96PI1 79 aa8.69□□□□□ -1.02
LMBR1-201ENST00000353442 ABCA12Q86UK0 2595 aa8.69□□□□□ -1.02
LMBR1-201ENST00000353442 WIPF1O43516 503 aa8.69□□□□□ -1.02
LMBR1-201ENST00000353442 ERC2-IT1O76042 136 aa8.68□□□□□ -1.02
LMBR1-201ENST00000353442 Q5VSD8 79 aa8.68□□□□□ -1.02
LMBR1-201ENST00000353442 TLN2Q9Y4G6 2542 aa8.67□□□□□ -1.02
LMBR1-201ENST00000353442 LINC01546A6NGU7 62 aa8.67□□□□□ -1.02
LMBR1-201ENST00000353442 ZNF462Q96JM2 2506 aa8.67□□□□□ -1.02
LMBR1-201ENST00000353442 PRO0461Q9UI25 63 aa8.66□□□□□ -1.02
LMBR1-201ENST00000353442 CD164Q04900 197 aa8.65□□□□□ -1.03
LMBR1-201ENST00000353442 CYP4F30PQ9H0H9 118 aa8.64□□□□□ -1.03
LMBR1-201ENST00000353442 S4R3F8 94 aa8.62□□□□□ -1.03
LMBR1-201ENST00000353442 RPS28P62857 69 aaKnown RBP8.61□□□□□ -1.03
LMBR1-201ENST00000353442 ACANP16112 2415 aa8.61□□□□□ -1.03
LMBR1-201ENST00000353442 HRES1P13985 223 aa8.58□□□□□ -1.04
LMBR1-201ENST00000353442 LITAFQ99732 161 aa8.58□□□□□ -1.04
LMBR1-201ENST00000353442 EIF4EBP3O60516 100 aaPredicted RBP8.57□□□□□ -1.04
LMBR1-201ENST00000353442 PRR34Q9NV39 138 aa8.55□□□□□ -1.04
LMBR1-201ENST00000353442 Q1T7F1 81 aa8.55□□□□□ -1.04
LMBR1-201ENST00000353442 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.54□□□□□ -1.04
LMBR1-201ENST00000353442 C10orf142B7Z368 130 aa8.54□□□□□ -1.04
LMBR1-201ENST00000353442 CSAG1Q6PB30 78 aa8.54□□□□□ -1.04
LMBR1-201ENST00000353442 A0A1B0GU33 70 aa8.53□□□□□ -1.04
LMBR1-201ENST00000353442 R4GN34 69 aa8.52□□□□□ -1.05
LMBR1-201ENST00000353442 PIEZO1Q92508 2521 aa8.51□□□□□ -1.05
LMBR1-201ENST00000353442 GIG44P09565 113 aaPredicted RBP8.5□□□□□ -1.05
LMBR1-201ENST00000353442 PLAC4Q8WY50 150 aa8.5□□□□□ -1.05
LMBR1-201ENST00000353442 CNBPP62633 177 aaKnown RBP8.48□□□□□ -1.05
LMBR1-201ENST00000353442 A0A1W2PNM2 257 aa8.48□□□□□ -1.05
LMBR1-201ENST00000353442 LCA10Q71F78 164 aa8.47□□□□□ -1.05
LMBR1-201ENST00000353442 SEC61BP60468 96 aaKnown RBP8.45□□□□□ -1.06
LMBR1-201ENST00000353442 KTN1-AS1Q86SY8 53 aa8.44□□□□□ -1.06
LMBR1-201ENST00000353442 H1FX-AS1Q4G0G2 97 aa8.43□□□□□ -1.06
LMBR1-201ENST00000353442 SPINK7P58062 85 aa8.4□□□□□ -1.06
LMBR1-201ENST00000353442 SETD2Q9BYW2 2564 aaPredicted RBP8.4□□□□□ -1.06
LMBR1-201ENST00000353442 ZCCHC13Q8WW36 166 aaKnown RBP8.39□□□□□ -1.07
LMBR1-201ENST00000353442 USP9XQ93008 2570 aaPredicted RBP8.39□□□□□ -1.07
LMBR1-201ENST00000353442 M0QZ58 72 aa8.37□□□□□ -1.07
LMBR1-201ENST00000353442 PKD1L2Q7Z442 2459 aa8.36□□□□□ -1.07
LMBR1-201ENST00000353442 CHD8Q9HCK8 2581 aa8.35□□□□□ -1.07
LMBR1-201ENST00000353442 ANKRD17O75179 2603 aaKnown RBP8.35□□□□□ -1.07
LMBR1-201ENST00000353442 A0A096LNT2 108 aa8.34□□□□□ -1.07
LMBR1-201ENST00000353442 Q8N9P0 234 aaPredicted RBP8.34□□□□□ -1.07
LMBR1-201ENST00000353442 H7BZZ5 65 aa8.34□□□□□ -1.08
LMBR1-201ENST00000353442 PCSK5Q92824 1860 aa8.33□□□□□ -1.08
LMBR1-201ENST00000353442 POLQO75417 2590 aa8.32□□□□□ -1.08
LMBR1-201ENST00000353442 DMAC1Q96GE9 116 aa8.32□□□□□ -1.08
LMBR1-201ENST00000353442 KLKP1Q107X0 134 aa8.31□□□□□ -1.08
LMBR1-201ENST00000353442 KRTAP1-3Q8IUG1 177 aa8.31□□□□□ -1.08
LMBR1-201ENST00000353442 WDR87Q6ZQQ6 2873 aa8.31□□□□□ -1.08
LMBR1-201ENST00000353442 CR1P17927 2039 aa8.3□□□□□ -1.08
LMBR1-201ENST00000353442 A0A0A0MQY5 61 aa8.3□□□□□ -1.08
LMBR1-201ENST00000353442 MTORP42345 2549 aa8.29□□□□□ -1.08
LMBR1-201ENST00000353442 SPANXA2-OT1Q8N9U9 137 aa8.28□□□□□ -1.08
LMBR1-201ENST00000353442 KRTAP1-1Q07627 177 aa8.27□□□□□ -1.09
LMBR1-201ENST00000353442 PRAC1Q96KF2 57 aa8.26□□□□□ -1.09
LMBR1-201ENST00000353442 FAM229BQ4G0N7 80 aa8.24□□□□□ -1.09
LMBR1-201ENST00000353442 ADM2Q7Z4H4 148 aa8.24□□□□□ -1.09
LMBR1-201ENST00000353442 FASNP49327 2511 aaKnown RBP8.23□□□□□ -1.09
LMBR1-201ENST00000353442 PLAC8Q9NZF1 115 aa8.22□□□□□ -1.09
LMBR1-201ENST00000353442 KRTAP10-1P60331 282 aa8.21□□□□□ -1.1
LMBR1-201ENST00000353442 LCE6AA0A183 80 aa8.2□□□□□ -1.1
LMBR1-201ENST00000353442 KRTAP10-2P60368 255 aa8.2□□□□□ -1.1
LMBR1-201ENST00000353442 Q5W150 140 aa8.2□□□□□ -1.1
LMBR1-201ENST00000353442 SPTBN4Q9H254 2564 aa8.18□□□□□ -1.1
LMBR1-201ENST00000353442 ANKRD11Q6UB99 2663 aaPredicted RBP8.17□□□□□ -1.1
LMBR1-201ENST00000353442 KLK9Q2XQG4 91 aa8.15□□□□□ -1.1
LMBR1-201ENST00000353442 OXTP01178 125 aa8.13□□□□□ -1.11
LMBR1-201ENST00000353442 MMP24-AS1A0A0U1RRL7 71 aa8.13□□□□□ -1.11
LMBR1-201ENST00000353442 SPATA8Q6RVD6 105 aa8.12□□□□□ -1.11
LMBR1-201ENST00000353442 USP9YO00507 2555 aaPredicted RBP8.11□□□□□ -1.11
LMBR1-201ENST00000353442 CENPFP49454 3210 aa8.11□□□□□ -1.11
LMBR1-201ENST00000353442 OCR1Q9BZK8 76 aa8.1□□□□□ -1.11
LMBR1-201ENST00000353442 USP24Q9UPU5 2620 aa8.1□□□□□ -1.11
LMBR1-201ENST00000353442 RPL37P61927 97 aaKnown RBP8.08□□□□□ -1.12
LMBR1-201ENST00000353442 ROMO1P60602 79 aa8.08□□□□□ -1.12
LMBR1-201ENST00000353442 C20orf166-AS1Q96NR2 134 aa8.07□□□□□ -1.12
LMBR1-201ENST00000353442 FP248Q71RG6 208 aaPredicted RBP8.06□□□□□ -1.12
LMBR1-201ENST00000353442 Q75L30 129 aa8.04□□□□□ -1.12
LMBR1-201ENST00000353442 H3BS24 57 aa8.04□□□□□ -1.12
LMBR1-201ENST00000353442 MGAM2Q2M2H8 2515 aa8.03□□□□□ -1.12
LMBR1-201ENST00000353442 KRTAP1-5Q9BYS1 174 aa8.03□□□□□ -1.12
LMBR1-201ENST00000353442 FLG2Q5D862 2391 aaPredicted RBP8□□□□□ -1.13
LMBR1-201ENST00000353442 BPTFQ12830 3046 aa7.99□□□□□ -1.13
LMBR1-201ENST00000353442 LINC01558Q9Y6Z2 57 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms