RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 NDUFV3P56181 108 aaKnown RBP10.76□□□□□ -0.69
SAMM50-201ENST00000350028 PDE6GP18545 87 aa10.75□□□□□ -0.69
SAMM50-201ENST00000350028 CNBPP62633 177 aaKnown RBP10.75□□□□□ -0.69
SAMM50-201ENST00000350028 C14orf177Q52M58 125 aa10.75□□□□□ -0.69
SAMM50-201ENST00000350028 DNAH7Q8WXX0 4024 aa10.75□□□□□ -0.69
SAMM50-201ENST00000350028 DNAH1Q9P2D7 4330 aa10.75□□□□□ -0.69
SAMM50-201ENST00000350028 CSMD3Q7Z407 3707 aa10.75□□□□□ -0.69
SAMM50-201ENST00000350028 IGLV1-50A0A075B6I6 118 aa10.75□□□□□ -0.69
SAMM50-201ENST00000350028 FAM168BA1KXE4 195 aa10.75□□□□□ -0.69
SAMM50-201ENST00000350028 Q6JHZ5 121 aa10.75□□□□□ -0.69
SAMM50-201ENST00000350028 Q6ZQT0 140 aa10.75□□□□□ -0.69
SAMM50-201ENST00000350028 ANAPC13Q9BS18 74 aa10.75□□□□□ -0.69
SAMM50-201ENST00000350028 DSCR8Q96T75 97 aa10.74□□□□□ -0.69
SAMM50-201ENST00000350028 KRTAP7-1Q8IUC3 87 aa10.73□□□□□ -0.69
SAMM50-201ENST00000350028 SPRR1AP35321 89 aa10.72□□□□□ -0.69
SAMM50-201ENST00000350028 MRPL55Q7Z7F7 128 aaKnown RBP10.72□□□□□ -0.69
SAMM50-201ENST00000350028 RPL37AP8A6NKH3 93 aa10.71□□□□□ -0.69
SAMM50-201ENST00000350028 FAM19A5Q7Z5A7 132 aaPredicted RBP10.71□□□□□ -0.69
SAMM50-201ENST00000350028 DHRS4-AS1Q9P1J3 65 aa10.71□□□□□ -0.69
SAMM50-201ENST00000350028 DYNC2H1Q8NCM8 4307 aaKnown RBP10.7□□□□□ -0.7
SAMM50-201ENST00000350028 NBDYA0A0U1RRE5 68 aa10.7□□□□□ -0.7
SAMM50-201ENST00000350028 ETDCA0A1B0GVM5 59 aa10.7□□□□□ -0.7
SAMM50-201ENST00000350028 C16orf90A8MZG2 172 aa10.7□□□□□ -0.7
SAMM50-201ENST00000350028 KRTAP4-16G5E9R7 235 aaPredicted RBP10.7□□□□□ -0.7
SAMM50-201ENST00000350028 B5MCH6 92 aa10.69□□□□□ -0.7
SAMM50-201ENST00000350028 Q6ZRX8 168 aa10.69□□□□□ -0.7
SAMM50-201ENST00000350028 TRBV7-4A0A0J9YYF1 115 aa10.67□□□□□ -0.7
SAMM50-201ENST00000350028 A0A096LNI7 61 aa10.67□□□□□ -0.7
SAMM50-201ENST00000350028 UBL5Q9BZL1 73 aa10.67□□□□□ -0.7
SAMM50-201ENST00000350028 IGKV3D-7A0A0C4DH55 119 aa10.66□□□□□ -0.7
SAMM50-201ENST00000350028 ATP5EP2Q5VTU8 51 aa10.66□□□□□ -0.7
SAMM50-201ENST00000350028 STARD9Q9P2P6 4700 aa10.65□□□□□ -0.7
SAMM50-201ENST00000350028 FAM236AA0A1B0GUQ0 79 aa10.65□□□□□ -0.7
SAMM50-201ENST00000350028 FAM236BA0A1B0GV22 79 aa10.65□□□□□ -0.7
SAMM50-201ENST00000350028 PKIGQ9Y2B9 76 aa10.65□□□□□ -0.7
SAMM50-201ENST00000350028 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.64□□□□□ -0.71
SAMM50-201ENST00000350028 LRCOL1A6NCL2 159 aa10.64□□□□□ -0.71
SAMM50-201ENST00000350028 PLECQ15149 4684 aaKnown RBP10.64□□□□□ -0.71
SAMM50-201ENST00000350028 REG3GQ6UW15 175 aa10.63□□□□□ -0.71
SAMM50-201ENST00000350028 Q9BRP9 147 aa10.63□□□□□ -0.71
SAMM50-201ENST00000350028 IGKV2-24A0A0C4DH68 120 aa10.62□□□□□ -0.71
SAMM50-201ENST00000350028 Q8N377 158 aa10.62□□□□□ -0.71
SAMM50-201ENST00000350028 TENM2Q9NT68 2774 aa10.62□□□□□ -0.71
SAMM50-201ENST00000350028 LYSTQ99698 3801 aa10.62□□□□□ -0.71
SAMM50-201ENST00000350028 M0R2N4 97 aa10.61□□□□□ -0.71
SAMM50-201ENST00000350028 Q6ZRN7 208 aaPredicted RBP10.61□□□□□ -0.71
SAMM50-201ENST00000350028 C9orf163Q8N9P6 203 aa10.61□□□□□ -0.71
SAMM50-201ENST00000350028 A0A1W2PNN7 141 aa10.61□□□□□ -0.71
SAMM50-201ENST00000350028 LINC01547P58512 204 aaPredicted RBP10.61□□□□□ -0.71
SAMM50-201ENST00000350028 DEFB105AQ8NG35 78 aa10.61□□□□□ -0.71
SAMM50-201ENST00000350028 IGLV5-48A0A075B6I7 105 aa10.58□□□□□ -0.72
SAMM50-201ENST00000350028 HIST1H4AP62805 103 aaKnown RBP10.58□□□□□ -0.72
SAMM50-201ENST00000350028 UBE2BP63146 152 aa10.58□□□□□ -0.72
SAMM50-201ENST00000350028 Q6ZVQ6 151 aa10.56□□□□□ -0.72
SAMM50-201ENST00000350028 ST20-AS1Q8NBB2 130 aa10.54□□□□□ -0.72
SAMM50-201ENST00000350028 LINC00474Q9P2X8 69 aa10.54□□□□□ -0.72
SAMM50-201ENST00000350028 ERC2-IT1O76042 136 aa10.53□□□□□ -0.72
SAMM50-201ENST00000350028 ATOX1O00244 68 aa10.53□□□□□ -0.72
SAMM50-201ENST00000350028 CHTF8P0CG12 524 aa10.53□□□□□ -0.72
SAMM50-201ENST00000350028 CCDC179H3BU77 68 aa10.52□□□□□ -0.73
SAMM50-201ENST00000350028 FAM19A1Q7Z5A9 133 aa10.52□□□□□ -0.73
SAMM50-201ENST00000350028 A0A087WVE0 104 aa10.51□□□□□ -0.73
SAMM50-201ENST00000350028 HAMPP81172 84 aa10.5□□□□□ -0.73
SAMM50-201ENST00000350028 TNP2Q05952 138 aa10.5□□□□□ -0.73
SAMM50-201ENST00000350028 CXCL6P80162 114 aa10.5□□□□□ -0.73
SAMM50-201ENST00000350028 PHF5AQ7RTV0 110 aaKnown RBP10.5□□□□□ -0.73
SAMM50-201ENST00000350028 A0A1B0GW54 56 aa10.49□□□□□ -0.73
SAMM50-201ENST00000350028 A0A087WTM6 91 aa10.48□□□□□ -0.73
SAMM50-201ENST00000350028 Q6ZR54 194 aa10.48□□□□□ -0.73
SAMM50-201ENST00000350028 C3orf22Q8N5N4 141 aa10.48□□□□□ -0.73
SAMM50-201ENST00000350028 VPS13DQ5THJ4 4388 aa10.48□□□□□ -0.73
SAMM50-201ENST00000350028 H0Y9J4 135 aa10.47□□□□□ -0.73
SAMM50-201ENST00000350028 PRLHP81277 87 aa10.47□□□□□ -0.73
SAMM50-201ENST00000350028 DNAH10Q8IVF4 4471 aa10.46□□□□□ -0.73
SAMM50-201ENST00000350028 FUSP35637 526 aaKnown RBP eCLIP10.45□□□□□ -0.74
SAMM50-201ENST00000350028 C1orf137Q5JT78 98 aa10.45□□□□□ -0.74
SAMM50-201ENST00000350028 UQCRQO14949 82 aa10.44□□□□□ -0.74
SAMM50-201ENST00000350028 SMIM29Q86T20 159 aa10.44□□□□□ -0.74
SAMM50-201ENST00000350028 WWC2-AS2Q96NR7 200 aa10.44□□□□□ -0.74
SAMM50-201ENST00000350028 COX7CP15954 63 aa10.44□□□□□ -0.74
SAMM50-201ENST00000350028 NREPQ16612 68 aa10.44□□□□□ -0.74
SAMM50-201ENST00000350028 KRTAP11-1Q8IUC1 163 aa10.44□□□□□ -0.74
SAMM50-201ENST00000350028 DPH3Q96FX2 82 aa10.43□□□□□ -0.74
SAMM50-201ENST00000350028 HIGD2AQ9BW72 106 aa10.43□□□□□ -0.74
SAMM50-201ENST00000350028 F8WEM9 126 aa10.42□□□□□ -0.74
SAMM50-201ENST00000350028 A0A1W2PNM2 257 aa10.41□□□□□ -0.74
SAMM50-201ENST00000350028 EPM2AB3EWF7 344 aa10.41□□□□□ -0.74
SAMM50-201ENST00000350028 Q8NBF4 154 aa10.41□□□□□ -0.74
SAMM50-201ENST00000350028 SPACA4Q8TDM5 124 aa10.41□□□□□ -0.74
SAMM50-201ENST00000350028 PANO1I0J062 215 aa10.41□□□□□ -0.74
SAMM50-201ENST00000350028 C3orf84H3BNL1 204 aa10.39□□□□□ -0.75
SAMM50-201ENST00000350028 BCE1O60756 84 aa10.39□□□□□ -0.75
SAMM50-201ENST00000350028 SERP2Q8N6R1 65 aa10.39□□□□□ -0.75
SAMM50-201ENST00000350028 UBE2AP49459 152 aa10.38□□□□□ -0.75
SAMM50-201ENST00000350028 SPRR4Q96PI1 79 aa10.38□□□□□ -0.75
SAMM50-201ENST00000350028 RTL8CO15255 209 aa10.38□□□□□ -0.75
SAMM50-201ENST00000350028 SPRR1BP22528 89 aa10.38□□□□□ -0.75
SAMM50-201ENST00000350028 C1orf134Q5TEV5 83 aa10.38□□□□□ -0.75
SAMM50-201ENST00000350028 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.38□□□□□ -0.75
SAMM50-201ENST00000350028 IGLV8-61A0A075B6I0 122 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms