RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 WFDC10BQ8IUB3 73 aa3.8□□□□□ -1.8
RFC1-201ENST00000349703 UNC80Q8N2C7 3258 aa3.8□□□□□ -1.8
RFC1-201ENST00000349703 MED13LQ71F56 2210 aa3.8□□□□□ -1.8
RFC1-201ENST00000349703 WFDC13Q8IUB5 93 aa3.8□□□□□ -1.8
RFC1-201ENST00000349703 LINC00304Q8N9R0 145 aa3.8□□□□□ -1.8
RFC1-201ENST00000349703 SZT2Q5T011 3432 aa3.8□□□□□ -1.8
RFC1-201ENST00000349703 CHD9Q3L8U1 2897 aa3.8□□□□□ -1.8
RFC1-201ENST00000349703 SPENQ96T58 3664 aaKnown RBP3.79□□□□□ -1.8
RFC1-201ENST00000349703 A0A096LNT2 108 aa3.79□□□□□ -1.8
RFC1-201ENST00000349703 IGLV1-51P01701 117 aa3.79□□□□□ -1.8
RFC1-201ENST00000349703 XP32Q5T750 250 aa3.78□□□□□ -1.8
RFC1-201ENST00000349703 LCE2CQ5TA81 110 aa3.78□□□□□ -1.8
RFC1-201ENST00000349703 PHF5AQ7RTV0 110 aaKnown RBP3.78□□□□□ -1.8
RFC1-201ENST00000349703 TRANK1O15050 2925 aa3.78□□□□□ -1.8
RFC1-201ENST00000349703 C6orf48Q9UBA6 75 aa3.77□□□□□ -1.81
RFC1-201ENST00000349703 M0R2N4 97 aa3.77□□□□□ -1.81
RFC1-201ENST00000349703 DEFB135Q30KP9 77 aa3.77□□□□□ -1.81
RFC1-201ENST00000349703 SPANXA2-OT1Q8N9U9 137 aa3.77□□□□□ -1.81
RFC1-201ENST00000349703 SPTAN1Q13813 2472 aaKnown RBP3.76□□□□□ -1.81
RFC1-201ENST00000349703 ASB16-AS1Q495Z4 193 aa3.76□□□□□ -1.81
RFC1-201ENST00000349703 EP300Q09472 2414 aaPredicted RBP3.76□□□□□ -1.81
RFC1-201ENST00000349703 A0A0G2JQZ4 141 aa3.76□□□□□ -1.81
RFC1-201ENST00000349703 A0A1W2PNN7 141 aa3.75□□□□□ -1.81
RFC1-201ENST00000349703 A8MUU9 505 aa3.75□□□□□ -1.81
RFC1-201ENST00000349703 C5orf42Q9H799 3197 aa3.74□□□□□ -1.81
RFC1-201ENST00000349703 C16orf90A8MZG2 172 aa3.74□□□□□ -1.81
RFC1-201ENST00000349703 DEFB4AO15263 64 aa3.74□□□□□ -1.81
RFC1-201ENST00000349703 GVINP1Q7Z2Y8 2422 aa3.74□□□□□ -1.81
RFC1-201ENST00000349703 MT3P25713 68 aa3.73□□□□□ -1.81
RFC1-201ENST00000349703 Q6ZRX8 168 aa3.73□□□□□ -1.81
RFC1-201ENST00000349703 TP53AIP1Q9HCN2 124 aa3.73□□□□□ -1.81
RFC1-201ENST00000349703 IGLV5-48A0A075B6I7 105 aa3.73□□□□□ -1.81
RFC1-201ENST00000349703 KCNQ1DNQ9H478 68 aa3.73□□□□□ -1.81
RFC1-201ENST00000349703 K7EQZ3 153 aa3.72□□□□□ -1.81
RFC1-201ENST00000349703 ROMO1P60602 79 aa3.72□□□□□ -1.81
RFC1-201ENST00000349703 SORL1Q92673 2214 aa3.72□□□□□ -1.81
RFC1-201ENST00000349703 PTPRQQ9UMZ3 2332 aa3.72□□□□□ -1.81
RFC1-201ENST00000349703 PLAC4Q8WY50 150 aa3.72□□□□□ -1.81
RFC1-201ENST00000349703 PRR34Q9NV39 138 aa3.71□□□□□ -1.81
RFC1-201ENST00000349703 A0A087WSZ3 146 aa3.71□□□□□ -1.82
RFC1-201ENST00000349703 GIG44P09565 113 aaPredicted RBP3.71□□□□□ -1.82
RFC1-201ENST00000349703 PSORS1C2Q9UIG4 136 aa3.71□□□□□ -1.82
RFC1-201ENST00000349703 KRTAP3-1Q9BYR8 98 aa3.7□□□□□ -1.82
RFC1-201ENST00000349703 LAMA2P24043 3122 aaKnown RBP3.69□□□□□ -1.82
RFC1-201ENST00000349703 KRTAP29-1A8MX34 341 aaPredicted RBP3.69□□□□□ -1.82
RFC1-201ENST00000349703 H3BNG1 76 aa3.69□□□□□ -1.82
RFC1-201ENST00000349703 A0A1W2PNM2 257 aa3.69□□□□□ -1.82
RFC1-201ENST00000349703 SPRR4Q96PI1 79 aa3.69□□□□□ -1.82
RFC1-201ENST00000349703 Q5VV11 94 aa3.69□□□□□ -1.82
RFC1-201ENST00000349703 LCE6AA0A183 80 aa3.68□□□□□ -1.82
RFC1-201ENST00000349703 PCOTHQ58A44 107 aa3.67□□□□□ -1.82
RFC1-201ENST00000349703 Q8N9P0 234 aaPredicted RBP3.67□□□□□ -1.82
RFC1-201ENST00000349703 ZCCHC13Q8WW36 166 aaKnown RBP3.67□□□□□ -1.82
RFC1-201ENST00000349703 ZFHX4Q86UP3 3567 aa3.67□□□□□ -1.82
RFC1-201ENST00000349703 WNK1Q9H4A3 2382 aa3.67□□□□□ -1.82
RFC1-201ENST00000349703 A0A1B0GU33 70 aa3.67□□□□□ -1.82
RFC1-201ENST00000349703 Q8NDZ9 215 aa3.67□□□□□ -1.82
RFC1-201ENST00000349703 SPINK7P58062 85 aa3.66□□□□□ -1.82
RFC1-201ENST00000349703 C15orf56Q8N910 161 aa3.66□□□□□ -1.82
RFC1-201ENST00000349703 LINC01556Q5JQF7 62 aa3.66□□□□□ -1.82
RFC1-201ENST00000349703 EYSQ5T1H1 3165 aa3.66□□□□□ -1.82
RFC1-201ENST00000349703 NOTCH3Q9UM47 2321 aa3.66□□□□□ -1.82
RFC1-201ENST00000349703 C2CD3Q4AC94 2353 aa3.66□□□□□ -1.82
RFC1-201ENST00000349703 KRTAP11-1Q8IUC1 163 aa3.65□□□□□ -1.82
RFC1-201ENST00000349703 DEFB131BA0A096LNP1 70 aa3.65□□□□□ -1.83
RFC1-201ENST00000349703 LINC01558Q9Y6Z2 57 aa3.64□□□□□ -1.83
RFC1-201ENST00000349703 NBASA2RRP1 2371 aa3.64□□□□□ -1.83
RFC1-201ENST00000349703 MKI67P46013 3256 aaKnown RBP3.63□□□□□ -1.83
RFC1-201ENST00000349703 LORP23490 312 aaPredicted RBP3.63□□□□□ -1.83
RFC1-201ENST00000349703 CSPG4Q6UVK1 2322 aa3.63□□□□□ -1.83
RFC1-201ENST00000349703 RIF1Q5UIP0 2472 aaKnown RBP3.62□□□□□ -1.83
RFC1-201ENST00000349703 Q5W150 140 aa3.62□□□□□ -1.83
RFC1-201ENST00000349703 MUC3AQ02505 3323 aa3.62□□□□□ -1.83
RFC1-201ENST00000349703 A8MU10 97 aa3.62□□□□□ -1.83
RFC1-201ENST00000349703 APLNQ9ULZ1 77 aa3.62□□□□□ -1.83
RFC1-201ENST00000349703 TLN1Q9Y490 2541 aaKnown RBP3.61□□□□□ -1.83
RFC1-201ENST00000349703 PRLHP81277 87 aa3.61□□□□□ -1.83
RFC1-201ENST00000349703 A0A096LNI7 61 aa3.6□□□□□ -1.83
RFC1-201ENST00000349703 PIEZO2Q9H5I5 2752 aa3.6□□□□□ -1.83
RFC1-201ENST00000349703 PRRC2CQ9Y520 2896 aaKnown RBP3.6□□□□□ -1.83
RFC1-201ENST00000349703 ASPMQ8IZT6 3477 aa3.59□□□□□ -1.83
RFC1-201ENST00000349703 F8P00451 2351 aa3.59□□□□□ -1.83
RFC1-201ENST00000349703 A6NN06 94 aa3.59□□□□□ -1.83
RFC1-201ENST00000349703 SPRR1AP35321 89 aa3.59□□□□□ -1.83
RFC1-201ENST00000349703 REV3LO60673 3130 aa3.58□□□□□ -1.84
RFC1-201ENST00000349703 ABCA2Q9BZC7 2435 aa3.58□□□□□ -1.84
RFC1-201ENST00000349703 SPINK1P00995 79 aa3.58□□□□□ -1.84
RFC1-201ENST00000349703 MRPL34Q9BQ48 92 aaKnown RBP3.58□□□□□ -1.84
RFC1-201ENST00000349703 ANAPC11Q9NYG5 84 aa3.57□□□□□ -1.84
RFC1-201ENST00000349703 RELNP78509 3460 aa3.57□□□□□ -1.84
RFC1-201ENST00000349703 ZFHX2Q9C0A1 2572 aaPredicted RBP3.57□□□□□ -1.84
RFC1-201ENST00000349703 CNBPP62633 177 aaKnown RBP3.56□□□□□ -1.84
RFC1-201ENST00000349703 SPEGQ15772 3267 aa3.56□□□□□ -1.84
RFC1-201ENST00000349703 C9orf163Q8N9P6 203 aa3.56□□□□□ -1.84
RFC1-201ENST00000349703 RANBP2P49792 3224 aaKnown RBP3.55□□□□□ -1.84
RFC1-201ENST00000349703 ANKRD11Q6UB99 2663 aaPredicted RBP3.55□□□□□ -1.84
RFC1-201ENST00000349703 SMG1Q96Q15 3661 aaKnown RBP3.55□□□□□ -1.84
RFC1-201ENST00000349703 KRTAP10-9P60411 292 aa3.54□□□□□ -1.84
RFC1-201ENST00000349703 HIVEP3Q5T1R4 2406 aa3.54□□□□□ -1.84
RFC1-201ENST00000349703 SPG11Q96JI7 2443 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms