RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 TRAV23DV6A0A075B6W5 121 aa11.76□□□□□ -0.53
CHMP4A-201ENST00000347519 CDK2AP2O75956 126 aa11.76□□□□□ -0.53
CHMP4A-201ENST00000347519 PSORS1C2Q9UIG4 136 aa11.75□□□□□ -0.53
CHMP4A-201ENST00000347519 PRYO14603 147 aa11.74□□□□□ -0.53
CHMP4A-201ENST00000347519 VPS13BQ7Z7G8 4022 aa11.74□□□□□ -0.53
CHMP4A-201ENST00000347519 TSPAN13O95857 204 aa11.73□□□□□ -0.53
CHMP4A-201ENST00000347519 SPRR1AP35321 89 aa11.73□□□□□ -0.53
CHMP4A-201ENST00000347519 REG3GQ6UW15 175 aa11.72□□□□□ -0.53
CHMP4A-201ENST00000347519 KRTAP4-16G5E9R7 235 aaPredicted RBP11.71□□□□□ -0.53
CHMP4A-201ENST00000347519 LINC00528Q8N1L1 170 aa11.71□□□□□ -0.53
CHMP4A-201ENST00000347519 ZNF73O43830 326 aaPredicted RBP11.7□□□□□ -0.54
CHMP4A-201ENST00000347519 C6orf99Q4VX62 202 aa11.7□□□□□ -0.54
CHMP4A-201ENST00000347519 RPL28P46779 137 aaKnown RBP11.69□□□□□ -0.54
CHMP4A-201ENST00000347519 Q1RN00 199 aa11.69□□□□□ -0.54
CHMP4A-201ENST00000347519 NAA38Q9BRA0 125 aaKnown RBP11.69□□□□□ -0.54
CHMP4A-201ENST00000347519 TAX1BP3O14907 124 aa11.68□□□□□ -0.54
CHMP4A-201ENST00000347519 C1orf137Q5JT78 98 aa11.67□□□□□ -0.54
CHMP4A-201ENST00000347519 DIRC1Q969H9 104 aa11.67□□□□□ -0.54
CHMP4A-201ENST00000347519 BCE1O60756 84 aa11.67□□□□□ -0.54
CHMP4A-201ENST00000347519 B5MCH6 92 aa11.66□□□□□ -0.54
CHMP4A-201ENST00000347519 TRIAP1O43715 76 aa11.66□□□□□ -0.54
CHMP4A-201ENST00000347519 FAM19A1Q7Z5A9 133 aa11.66□□□□□ -0.54
CHMP4A-201ENST00000347519 KRTAP4-5Q9BYR2 181 aa11.66□□□□□ -0.54
CHMP4A-201ENST00000347519 CBY1Q9Y3M2 126 aa11.65□□□□□ -0.55
CHMP4A-201ENST00000347519 PKHD1L1Q86WI1 4243 aa11.64□□□□□ -0.55
CHMP4A-201ENST00000347519 ETDCA0A1B0GVM5 59 aa11.64□□□□□ -0.55
CHMP4A-201ENST00000347519 KRTAP10-4P60372 401 aaPredicted RBP11.64□□□□□ -0.55
CHMP4A-201ENST00000347519 RPL37AP61513 92 aaKnown RBP11.64□□□□□ -0.55
CHMP4A-201ENST00000347519 PRLHP81277 87 aa11.64□□□□□ -0.55
CHMP4A-201ENST00000347519 COL5A1-AS1Q5SY13 56 aa11.64□□□□□ -0.55
CHMP4A-201ENST00000347519 ABCA13Q86UQ4 5058 aa11.63□□□□□ -0.55
CHMP4A-201ENST00000347519 KRTAP13-1Q8IUC0 172 aa11.63□□□□□ -0.55
CHMP4A-201ENST00000347519 COX7BP24311 80 aa11.62□□□□□ -0.55
CHMP4A-201ENST00000347519 PSMB2P49721 201 aa11.62□□□□□ -0.55
CHMP4A-201ENST00000347519 IGLV7-43P04211 117 aa11.61□□□□□ -0.55
CHMP4A-201ENST00000347519 ELOF1P60002 83 aaKnown RBP11.61□□□□□ -0.55
CHMP4A-201ENST00000347519 TRBV7-6A0A0J9YX20 115 aa11.6□□□□□ -0.55
CHMP4A-201ENST00000347519 C9orf118A6NHY6 69 aa11.6□□□□□ -0.55
CHMP4A-201ENST00000347519 H3BUT2 72 aa11.6□□□□□ -0.55
CHMP4A-201ENST00000347519 Q6ZRX8 168 aa11.6□□□□□ -0.55
CHMP4A-201ENST00000347519 Q9BRP9 147 aa11.6□□□□□ -0.55
CHMP4A-201ENST00000347519 UBE2AP49459 152 aa11.59□□□□□ -0.55
CHMP4A-201ENST00000347519 FAM218AQ96MZ4 157 aa11.58□□□□□ -0.56
CHMP4A-201ENST00000347519 SMCR5Q8TEV8 140 aa11.57□□□□□ -0.56
CHMP4A-201ENST00000347519 CLEC2BQ92478 149 aa11.57□□□□□ -0.56
CHMP4A-201ENST00000347519 ERC2-IT1O76042 136 aa11.56□□□□□ -0.56
CHMP4A-201ENST00000347519 VAMP3Q15836 100 aa11.56□□□□□ -0.56
CHMP4A-201ENST00000347519 Q5VSD8 79 aa11.56□□□□□ -0.56
CHMP4A-201ENST00000347519 H0Y9J4 135 aa11.55□□□□□ -0.56
CHMP4A-201ENST00000347519 FAM229AH3BQW9 127 aa11.55□□□□□ -0.56
CHMP4A-201ENST00000347519 ZNF861PO60384 105 aa11.55□□□□□ -0.56
CHMP4A-201ENST00000347519 LINC00575Q6W349 94 aa11.54□□□□□ -0.56
CHMP4A-201ENST00000347519 Q8N1X5 172 aa11.54□□□□□ -0.56
CHMP4A-201ENST00000347519 HIGD2AQ9BW72 106 aa11.54□□□□□ -0.56
CHMP4A-201ENST00000347519 H0YGX0 51 aa11.54□□□□□ -0.56
CHMP4A-201ENST00000347519 SCGB1C2P0DMR2 95 aa11.54□□□□□ -0.56
CHMP4A-201ENST00000347519 A0A1W2PPM0 123 aa11.52□□□□□ -0.57
CHMP4A-201ENST00000347519 COX6CP09669 75 aa11.52□□□□□ -0.57
CHMP4A-201ENST00000347519 PLA2G1BP04054 148 aaKnown RBP11.51□□□□□ -0.57
CHMP4A-201ENST00000347519 SRRM2Q9UQ35 2752 aaKnown RBP11.51□□□□□ -0.57
CHMP4A-201ENST00000347519 INAFM2P0DMQ5 153 aa11.5□□□□□ -0.57
CHMP4A-201ENST00000347519 TCL1BO95988 128 aa11.49□□□□□ -0.57
CHMP4A-201ENST00000347519 ST20-AS1Q8NBB2 130 aa11.49□□□□□ -0.57
CHMP4A-201ENST00000347519 DHRS4-AS1Q9P1J3 65 aa11.49□□□□□ -0.57
CHMP4A-201ENST00000347519 hADV29S1A0JD25 119 aa11.47□□□□□ -0.57
CHMP4A-201ENST00000347519 LST1O00453 97 aa11.46□□□□□ -0.57
CHMP4A-201ENST00000347519 FABP2P12104 132 aa11.45□□□□□ -0.58
CHMP4A-201ENST00000347519 SLC25A20O43772 301 aa11.44□□□□□ -0.58
CHMP4A-201ENST00000347519 SPINK6Q6UWN8 80 aa11.43□□□□□ -0.58
CHMP4A-201ENST00000347519 A0A1B0GX51 115 aa11.42□□□□□ -0.58
CHMP4A-201ENST00000347519 LYRM7Q5U5X0 104 aa11.42□□□□□ -0.58
CHMP4A-201ENST00000347519 Q6ZQY7 126 aa11.42□□□□□ -0.58
CHMP4A-201ENST00000347519 LINC01547P58512 204 aaPredicted RBP11.41□□□□□ -0.58
CHMP4A-201ENST00000347519 ATXN8Q156A1 80 aa11.41□□□□□ -0.58
CHMP4A-201ENST00000347519 SPRR4Q96PI1 79 aa11.41□□□□□ -0.58
CHMP4A-201ENST00000347519 SPCS1Q9Y6A9 102 aa11.41□□□□□ -0.58
CHMP4A-201ENST00000347519 TRACP01848 142 aa11.4□□□□□ -0.59
CHMP4A-201ENST00000347519 ANAPC11Q9NYG5 84 aa11.4□□□□□ -0.59
CHMP4A-201ENST00000347519 TRBV20-1A0A075B6N2 111 aa11.39□□□□□ -0.59
CHMP4A-201ENST00000347519 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.39□□□□□ -0.59
CHMP4A-201ENST00000347519 DEFB105AQ8NG35 78 aa11.39□□□□□ -0.59
CHMP4A-201ENST00000347519 FAT3Q8TDW7 4589 aa11.38□□□□□ -0.59
CHMP4A-201ENST00000347519 KRTAP1-4P0C5Y4 121 aa11.37□□□□□ -0.59
CHMP4A-201ENST00000347519 GAGE2AQ6NT46 116 aa11.37□□□□□ -0.59
CHMP4A-201ENST00000347519 Q8N377 158 aa11.37□□□□□ -0.59
CHMP4A-201ENST00000347519 IGLV5-48A0A075B6I7 105 aa11.36□□□□□ -0.59
CHMP4A-201ENST00000347519 A0A1B0GV90 55 aa11.36□□□□□ -0.59
CHMP4A-201ENST00000347519 H3BMG7 143 aa11.36□□□□□ -0.59
CHMP4A-201ENST00000347519 K7EP34 96 aa11.36□□□□□ -0.59
CHMP4A-201ENST00000347519 SNCGO76070 127 aa11.35□□□□□ -0.59
CHMP4A-201ENST00000347519 DNAL4O96015 105 aa11.34□□□□□ -0.59
CHMP4A-201ENST00000347519 SPRR1BP22528 89 aa11.33□□□□□ -0.6
CHMP4A-201ENST00000347519 LINC00483Q53H64 154 aa11.33□□□□□ -0.6
CHMP4A-201ENST00000347519 MTURNQ8N3F0 131 aa11.33□□□□□ -0.6
CHMP4A-201ENST00000347519 ZNF706Q9Y5V0 76 aaPredicted RBP11.33□□□□□ -0.6
CHMP4A-201ENST00000347519 LRP1Q07954 4544 aaKnown RBP11.32□□□□□ -0.6
CHMP4A-201ENST00000347519 TEX49A0A1B0GTD5 131 aa11.31□□□□□ -0.6
CHMP4A-201ENST00000347519 C9JAW5 83 aa11.31□□□□□ -0.6
CHMP4A-201ENST00000347519 SMIM29Q86T20 159 aa11.31□□□□□ -0.6
CHMP4A-201ENST00000347519 C3orf22Q8N5N4 141 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms