RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 C19orf73Q9NVV2 129 aa5.38□□□□□ -1.55
UBE4B-202ENST00000343090 CENPEQ02224 2701 aa5.37□□□□□ -1.55
UBE4B-202ENST00000343090 GVQW2A0A096LPI5 108 aaPredicted RBP5.37□□□□□ -1.55
UBE4B-202ENST00000343090 FAM104AQ969W3 186 aa5.37□□□□□ -1.55
UBE4B-202ENST00000343090 EPM2AB3EWF7 344 aa5.37□□□□□ -1.55
UBE4B-202ENST00000343090 SPAG11AQ6PDA7 123 aa5.37□□□□□ -1.55
UBE4B-202ENST00000343090 TRBV7-4A0A0J9YYF1 115 aa5.36□□□□□ -1.55
UBE4B-202ENST00000343090 FAM229BQ4G0N7 80 aa5.36□□□□□ -1.55
UBE4B-202ENST00000343090 KTN1-AS1Q86SY8 53 aa5.36□□□□□ -1.55
UBE4B-202ENST00000343090 FLNBO75369 2602 aaKnown RBP5.36□□□□□ -1.55
UBE4B-202ENST00000343090 USP24Q9UPU5 2620 aa5.36□□□□□ -1.55
UBE4B-202ENST00000343090 KRTAP10-11P60412 298 aa5.35□□□□□ -1.55
UBE4B-202ENST00000343090 IGKV2D-30A0A075B6S6 120 aa5.34□□□□□ -1.55
UBE4B-202ENST00000343090 FAM229AH3BQW9 127 aa5.34□□□□□ -1.55
UBE4B-202ENST00000343090 IGKV2-30P06310 120 aa5.34□□□□□ -1.55
UBE4B-202ENST00000343090 C16orf90A8MZG2 172 aa5.34□□□□□ -1.56
UBE4B-202ENST00000343090 VPS13AQ96RL7 3174 aa5.33□□□□□ -1.56
UBE4B-202ENST00000343090 A0A0G2JQZ4 141 aa5.33□□□□□ -1.56
UBE4B-202ENST00000343090 A0A1W2PNN7 141 aa5.33□□□□□ -1.56
UBE4B-202ENST00000343090 FLNAP21333 2647 aaKnown RBP5.33□□□□□ -1.56
UBE4B-202ENST00000343090 A0A1B0GW54 56 aa5.33□□□□□ -1.56
UBE4B-202ENST00000343090 C7orf65Q6ZTY9 151 aa5.33□□□□□ -1.56
UBE4B-202ENST00000343090 DNAH14Q0VDD8 3507 aa5.33□□□□□ -1.56
UBE4B-202ENST00000343090 K7EQZ3 153 aa5.33□□□□□ -1.56
UBE4B-202ENST00000343090 DNAH10OSP0CZ25 163 aa5.33□□□□□ -1.56
UBE4B-202ENST00000343090 SPACA4Q8TDM5 124 aa5.33□□□□□ -1.56
UBE4B-202ENST00000343090 C15orf56Q8N910 161 aa5.32□□□□□ -1.56
UBE4B-202ENST00000343090 CELSR3Q9NYQ7 3312 aa5.32□□□□□ -1.56
UBE4B-202ENST00000343090 CYP4F30PQ9H0H9 118 aa5.32□□□□□ -1.56
UBE4B-202ENST00000343090 NBDYA0A0U1RRE5 68 aa5.32□□□□□ -1.56
UBE4B-202ENST00000343090 LINC00528Q8N1L1 170 aa5.32□□□□□ -1.56
UBE4B-202ENST00000343090 PRR34Q9NV39 138 aa5.32□□□□□ -1.56
UBE4B-202ENST00000343090 IGLV1-50A0A075B6I6 118 aa5.31□□□□□ -1.56
UBE4B-202ENST00000343090 RTL8CO15255 209 aa5.31□□□□□ -1.56
UBE4B-202ENST00000343090 Q1T7F1 81 aa5.31□□□□□ -1.56
UBE4B-202ENST00000343090 ATP11AUNQ6ZP68 121 aa5.31□□□□□ -1.56
UBE4B-202ENST00000343090 KRTAP1-3Q8IUG1 177 aa5.31□□□□□ -1.56
UBE4B-202ENST00000343090 TP53AIP1Q9HCN2 124 aa5.31□□□□□ -1.56
UBE4B-202ENST00000343090 MGAM2Q2M2H8 2515 aa5.3□□□□□ -1.56
UBE4B-202ENST00000343090 LINC00612Q8N6U2 182 aa5.3□□□□□ -1.56
UBE4B-202ENST00000343090 KCNQ1DNQ9H478 68 aa5.3□□□□□ -1.56
UBE4B-202ENST00000343090 SZT2Q5T011 3432 aa5.3□□□□□ -1.56
UBE4B-202ENST00000343090 COA5Q86WW8 74 aa5.3□□□□□ -1.56
UBE4B-202ENST00000343090 ITPR3Q14573 2671 aa5.29□□□□□ -1.56
UBE4B-202ENST00000343090 H3BPC8 53 aa5.29□□□□□ -1.56
UBE4B-202ENST00000343090 OCR1Q9BZK8 76 aa5.29□□□□□ -1.56
UBE4B-202ENST00000343090 A0A1B0GU69 56 aa5.29□□□□□ -1.56
UBE4B-202ENST00000343090 PLA2G1BP04054 148 aaKnown RBP5.29□□□□□ -1.56
UBE4B-202ENST00000343090 RBM12B-AS1Q9P1G2 102 aa5.28□□□□□ -1.56
UBE4B-202ENST00000343090 VCANP13611 3396 aa5.28□□□□□ -1.56
UBE4B-202ENST00000343090 ACYP2P14621 99 aa5.28□□□□□ -1.56
UBE4B-202ENST00000343090 Q8N377 158 aa5.28□□□□□ -1.56
UBE4B-202ENST00000343090 CASC10Q5T4H9 136 aa5.27□□□□□ -1.57
UBE4B-202ENST00000343090 LOC101927531A0A1B0GV80 90 aa5.27□□□□□ -1.57
UBE4B-202ENST00000343090 LAMA1P25391 3075 aa5.27□□□□□ -1.57
UBE4B-202ENST00000343090 K7EIL1 84 aa5.27□□□□□ -1.57
UBE4B-202ENST00000343090 IGFL1Q6UW32 110 aa5.27□□□□□ -1.57
UBE4B-202ENST00000343090 LCA10Q71F78 164 aa5.26□□□□□ -1.57
UBE4B-202ENST00000343090 KRTAP1-1Q07627 177 aa5.26□□□□□ -1.57
UBE4B-202ENST00000343090 J3QL48 77 aa5.26□□□□□ -1.57
UBE4B-202ENST00000343090 ATRQ13535 2644 aa5.25□□□□□ -1.57
UBE4B-202ENST00000343090 MAP1AP78559 2803 aaPredicted RBP5.25□□□□□ -1.57
UBE4B-202ENST00000343090 C8orf87E5RJ46 101 aa5.25□□□□□ -1.57
UBE4B-202ENST00000343090 AKAP13Q12802 2813 aa5.25□□□□□ -1.57
UBE4B-202ENST00000343090 TYMSOSQ8TAI1 123 aa5.25□□□□□ -1.57
UBE4B-202ENST00000343090 A8MWP4 228 aa5.24□□□□□ -1.57
UBE4B-202ENST00000343090 ZNF292O60281 2723 aa5.24□□□□□ -1.57
UBE4B-202ENST00000343090 FRYQ5TBA9 3013 aa5.24□□□□□ -1.57
UBE4B-202ENST00000343090 FREM2Q5SZK8 3169 aa5.24□□□□□ -1.57
UBE4B-202ENST00000343090 CFAP46Q8IYW2 2715 aa5.24□□□□□ -1.57
UBE4B-202ENST00000343090 DSPP15924 2871 aaKnown RBP5.23□□□□□ -1.57
UBE4B-202ENST00000343090 LINC00313P59037 77 aa5.23□□□□□ -1.57
UBE4B-202ENST00000343090 ANAPC11Q9NYG5 84 aa5.22□□□□□ -1.57
UBE4B-202ENST00000343090 IGLV8-61A0A075B6I0 122 aa5.21□□□□□ -1.57
UBE4B-202ENST00000343090 CDC42SE1Q9NRR8 79 aa5.21□□□□□ -1.57
UBE4B-202ENST00000343090 COX6B2Q6YFQ2 88 aa5.21□□□□□ -1.58
UBE4B-202ENST00000343090 A0A1W2PNM2 257 aa5.2□□□□□ -1.58
UBE4B-202ENST00000343090 WWC2-AS2Q96NR7 200 aa5.2□□□□□ -1.58
UBE4B-202ENST00000343090 CHD6Q8TD26 2715 aa5.19□□□□□ -1.58
UBE4B-202ENST00000343090 MRPL34Q9BQ48 92 aaKnown RBP5.19□□□□□ -1.58
UBE4B-202ENST00000343090 HELZ2Q9BYK8 2649 aaKnown RBP5.19□□□□□ -1.58
UBE4B-202ENST00000343090 Q96NJ1 140 aa5.18□□□□□ -1.58
UBE4B-202ENST00000343090 TLX1NBP0CAT3 122 aa5.18□□□□□ -1.58
UBE4B-202ENST00000343090 MAST4O15021 2626 aa5.18□□□□□ -1.58
UBE4B-202ENST00000343090 DSCR10P59022 87 aa5.18□□□□□ -1.58
UBE4B-202ENST00000343090 SPANXA2-OT1Q8N9U9 137 aa5.18□□□□□ -1.58
UBE4B-202ENST00000343090 Q5VV11 94 aa5.17□□□□□ -1.58
UBE4B-202ENST00000343090 NBEAQ8NFP9 2946 aa5.17□□□□□ -1.58
UBE4B-202ENST00000343090 Q8NDZ9 215 aa5.17□□□□□ -1.58
UBE4B-202ENST00000343090 C8orf17Q9NRJ1 99 aa5.17□□□□□ -1.58
UBE4B-202ENST00000343090 PLA2G2DQ9UNK4 145 aa5.17□□□□□ -1.58
UBE4B-202ENST00000343090 SPINT4Q6UDR6 99 aa5.16□□□□□ -1.58
UBE4B-202ENST00000343090 C9orf163Q8N9P6 203 aa5.16□□□□□ -1.58
UBE4B-202ENST00000343090 H3BS24 57 aa5.15□□□□□ -1.58
UBE4B-202ENST00000343090 Q75L30 129 aa5.15□□□□□ -1.58
UBE4B-202ENST00000343090 Q8N9P0 234 aaPredicted RBP5.15□□□□□ -1.58
UBE4B-202ENST00000343090 A0A087WTM6 91 aa5.15□□□□□ -1.59
UBE4B-202ENST00000343090 IGLV5-48A0A075B6I7 105 aa5.14□□□□□ -1.59
UBE4B-202ENST00000343090 ZNF861PO60384 105 aa5.14□□□□□ -1.59
UBE4B-202ENST00000343090 A0A1B0GVX0 72 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms