RNA–Protein interactions for RNA: ENST00000342751.8

SDHC-201, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 1,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-201ENST00000342751 SPINK1P00995 79 aa11.5□□□□□ -0.57
SDHC-201ENST00000342751 ZNF73O43830 326 aaPredicted RBP11.49□□□□□ -0.57
SDHC-201ENST00000342751 HIST1H2BKO60814 126 aa11.49□□□□□ -0.57
SDHC-201ENST00000342751 HIST1H2BJP06899 126 aa11.49□□□□□ -0.57
SDHC-201ENST00000342751 HIST1H2BOP23527 126 aa11.49□□□□□ -0.57
SDHC-201ENST00000342751 HIST1H2BBP33778 126 aa11.49□□□□□ -0.57
SDHC-201ENST00000342751 HIST1H2BDP58876 126 aa11.49□□□□□ -0.57
SDHC-201ENST00000342751 HIST1H2BCP62807 126 aa11.49□□□□□ -0.57
SDHC-201ENST00000342751 HIST2H2BEQ16778 126 aa11.49□□□□□ -0.57
SDHC-201ENST00000342751 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.49□□□□□ -0.57
SDHC-201ENST00000342751 C9orf153Q5TBE3 101 aa11.49□□□□□ -0.57
SDHC-201ENST00000342751 HIST1H2BHQ93079 126 aa11.49□□□□□ -0.57
SDHC-201ENST00000342751 HIST1H2BNQ99877 126 aa11.49□□□□□ -0.57
SDHC-201ENST00000342751 HIST1H2BMQ99879 126 aa11.49□□□□□ -0.57
SDHC-201ENST00000342751 JOSD1Q15040 202 aaPredicted RBP11.48□□□□□ -0.57
SDHC-201ENST00000342751 OR13C6PQ8NH95 151 aa11.48□□□□□ -0.57
SDHC-201ENST00000342751 FAT4Q6V0I7 4981 aa11.48□□□□□ -0.57
SDHC-201ENST00000342751 ST20-AS1Q8NBB2 130 aa11.47□□□□□ -0.57
SDHC-201ENST00000342751 LINC00308Q8TCZ7 52 aa11.45□□□□□ -0.58
SDHC-201ENST00000342751 ZNF815PA8K554 130 aa11.44□□□□□ -0.58
SDHC-201ENST00000342751 KRTAP13-3Q3SY46 172 aa11.44□□□□□ -0.58
SDHC-201ENST00000342751 LCE2AQ5TA79 106 aaPredicted RBP11.44□□□□□ -0.58
SDHC-201ENST00000342751 SSBP3-AS1Q7Z2R9 100 aa11.44□□□□□ -0.58
SDHC-201ENST00000342751 TTTY13Q9BZ97 58 aa11.44□□□□□ -0.58
SDHC-201ENST00000342751 HINT1P49773 126 aaPredicted RBP11.43□□□□□ -0.58
SDHC-201ENST00000342751 LINC01545Q5VT33 79 aa11.43□□□□□ -0.58
SDHC-201ENST00000342751 LITAFQ99732 161 aa11.43□□□□□ -0.58
SDHC-201ENST00000342751 SPANXCQ9NY87 97 aa11.42□□□□□ -0.58
SDHC-201ENST00000342751 PET117Q6UWS5 81 aa11.41□□□□□ -0.58
SDHC-201ENST00000342751 Q8N377 158 aa11.41□□□□□ -0.58
SDHC-201ENST00000342751 KRTAP9-2Q9BYQ4 174 aa11.4□□□□□ -0.58
SDHC-201ENST00000342751 CBY1Q9Y3M2 126 aa11.4□□□□□ -0.58
SDHC-201ENST00000342751 TIMM17BO60830 172 aa11.39□□□□□ -0.59
SDHC-201ENST00000342751 C3orf79P0CE67 100 aa11.39□□□□□ -0.59
SDHC-201ENST00000342751 KRTDAPP60985 99 aa11.39□□□□□ -0.59
SDHC-201ENST00000342751 SLC25A20O43772 301 aa11.37□□□□□ -0.59
SDHC-201ENST00000342751 RPS29P62273 56 aaKnown RBP11.36□□□□□ -0.59
SDHC-201ENST00000342751 SPANXDQ9BXN6 97 aa11.36□□□□□ -0.59
SDHC-201ENST00000342751 HRCT1Q6UXD1 115 aa11.35□□□□□ -0.59
SDHC-201ENST00000342751 SCGB1D4Q6XE38 83 aa11.34□□□□□ -0.59
SDHC-201ENST00000342751 COX7BP24311 80 aa11.33□□□□□ -0.6
SDHC-201ENST00000342751 DHRS4-AS1Q9P1J3 65 aa11.33□□□□□ -0.6
SDHC-201ENST00000342751 ASB16-AS1Q495Z4 193 aa11.31□□□□□ -0.6
SDHC-201ENST00000342751 C6orf99Q4VX62 202 aa11.31□□□□□ -0.6
SDHC-201ENST00000342751 ATOH7Q8N100 152 aa11.31□□□□□ -0.6
SDHC-201ENST00000342751 DEFB105AQ8NG35 78 aa11.31□□□□□ -0.6
SDHC-201ENST00000342751 C20orf202A1L168 122 aa11.3□□□□□ -0.6
SDHC-201ENST00000342751 C5orf52A6NGY3 159 aa11.29□□□□□ -0.6
SDHC-201ENST00000342751 ANKRD39Q53RE8 183 aa11.29□□□□□ -0.6
SDHC-201ENST00000342751 SLC25A34Q6PIV7 304 aa11.29□□□□□ -0.6
SDHC-201ENST00000342751 LINC00518Q8N0U6 118 aa11.29□□□□□ -0.6
SDHC-201ENST00000342751 LAMTOR3Q9UHA4 124 aa11.29□□□□□ -0.6
SDHC-201ENST00000342751 ELOF1P60002 83 aaKnown RBP11.28□□□□□ -0.6
SDHC-201ENST00000342751 SEC61BP60468 96 aaKnown RBP11.28□□□□□ -0.6
SDHC-201ENST00000342751 TAL2Q16559 108 aa11.27□□□□□ -0.61
SDHC-201ENST00000342751 Q1RN00 199 aa11.27□□□□□ -0.61
SDHC-201ENST00000342751 SPRR1BP22528 89 aa11.26□□□□□ -0.61
SDHC-201ENST00000342751 COA6Q5JTJ3 125 aaKnown RBP11.26□□□□□ -0.61
SDHC-201ENST00000342751 A6NDN8 102 aa11.25□□□□□ -0.61
SDHC-201ENST00000342751 KRTAP4-1Q9BYQ7 146 aa11.25□□□□□ -0.61
SDHC-201ENST00000342751 LIMD2Q9BT23 127 aa11.24□□□□□ -0.61
SDHC-201ENST00000342751 XP32Q5T750 250 aa11.23□□□□□ -0.61
SDHC-201ENST00000342751 PCP2Q8IVA1 136 aa11.23□□□□□ -0.61
SDHC-201ENST00000342751 COPS9Q8WXC6 57 aa11.22□□□□□ -0.61
SDHC-201ENST00000342751 MUSTN1Q8IVN3 82 aa11.21□□□□□ -0.61
SDHC-201ENST00000342751 H7C2G1 150 aa11.2□□□□□ -0.62
SDHC-201ENST00000342751 C9orf92A6NGG3 77 aa11.19□□□□□ -0.62
SDHC-201ENST00000342751 IFITM1P13164 125 aa11.19□□□□□ -0.62
SDHC-201ENST00000342751 TEX49A0A1B0GTD5 131 aa11.18□□□□□ -0.62
SDHC-201ENST00000342751 A0A1B0GWB2 263 aa11.18□□□□□ -0.62
SDHC-201ENST00000342751 PRO1933Q9H354 126 aa11.17□□□□□ -0.62
SDHC-201ENST00000342751 TRBV7-6A0A0J9YX20 115 aa11.16□□□□□ -0.62
SDHC-201ENST00000342751 LINC01547P58512 204 aaPredicted RBP11.16□□□□□ -0.62
SDHC-201ENST00000342751 A0A0G2JQZ4 141 aa11.15□□□□□ -0.62
SDHC-201ENST00000342751 Q6ZVH6 145 aa11.15□□□□□ -0.62
SDHC-201ENST00000342751 SMIM29Q86T20 159 aa11.12□□□□□ -0.63
SDHC-201ENST00000342751 TRAV13-2A0A0B4J235 113 aa11.11□□□□□ -0.63
SDHC-201ENST00000342751 AKR1D1P51857 326 aa11.11□□□□□ -0.63
SDHC-201ENST00000342751 SMIM11BQ8TCY0 68 aa11.11□□□□□ -0.63
SDHC-201ENST00000342751 KRTAP9-6A0A140TA67 174 aa11.1□□□□□ -0.63
SDHC-201ENST00000342751 CD164Q04900 197 aa11.1□□□□□ -0.63
SDHC-201ENST00000342751 IGLV5-48A0A075B6I7 105 aa11.09□□□□□ -0.63
SDHC-201ENST00000342751 S100A2P29034 98 aa11.08□□□□□ -0.64
SDHC-201ENST00000342751 PCOTHQ58A44 107 aa11.08□□□□□ -0.64
SDHC-201ENST00000342751 NHP2Q9NX24 153 aaKnown RBP11.08□□□□□ -0.64
SDHC-201ENST00000342751 A4D1N5 150 aa11.07□□□□□ -0.64
SDHC-201ENST00000342751 HSBP1L1C9JCN9 74 aa11.06□□□□□ -0.64
SDHC-201ENST00000342751 SNRPEP62304 92 aaKnown RBP11.06□□□□□ -0.64
SDHC-201ENST00000342751 HIST3H2BBQ8N257 126 aa11.06□□□□□ -0.64
SDHC-201ENST00000342751 HIST1H2BLQ99880 126 aa11.05□□□□□ -0.64
SDHC-201ENST00000342751 IGLV8-61A0A075B6I0 122 aa11.03□□□□□ -0.64
SDHC-201ENST00000342751 VAMP3Q15836 100 aa11.02□□□□□ -0.65
SDHC-201ENST00000342751 C1orf195Q5TG92 126 aa11.02□□□□□ -0.65
SDHC-201ENST00000342751 F8WEM9 126 aa11.01□□□□□ -0.65
SDHC-201ENST00000342751 C12orf57Q99622 126 aa11□□□□□ -0.65
SDHC-201ENST00000342751 Q5XG85 94 aa10.98□□□□□ -0.65
SDHC-201ENST00000342751 S100A6P06703 90 aa10.97□□□□□ -0.65
SDHC-201ENST00000342751 LINC00575Q6W349 94 aa10.97□□□□□ -0.65
SDHC-201ENST00000342751 Q6ZQY7 126 aa10.97□□□□□ -0.65
SDHC-201ENST00000342751 hADV29S1A0JD25 119 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 223.9 ms