RNA–Protein interactions for RNA: ENST00000342665.4

SOX12-201, Transcript of SRY-box 12, humanhuman

APPRIS P1 BASIC

Gene SOX12, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX12-201ENST00000342665 PSPHP1O15172 72 aa13.35□□□□□ -0.27
SOX12-201ENST00000342665 TRBV7-4A0A0J9YYF1 115 aa13.35□□□□□ -0.27
SOX12-201ENST00000342665 KRTAP1-1Q07627 177 aa13.35□□□□□ -0.27
SOX12-201ENST00000342665 C15orf56Q8N910 161 aa13.34□□□□□ -0.27
SOX12-201ENST00000342665 TP53AIP1Q9HCN2 124 aa13.34□□□□□ -0.27
SOX12-201ENST00000342665 KRTAP10-11P60412 298 aa13.33□□□□□ -0.28
SOX12-201ENST00000342665 IGLV1-50A0A075B6I6 118 aa13.33□□□□□ -0.28
SOX12-201ENST00000342665 FAM168BA1KXE4 195 aa13.33□□□□□ -0.28
SOX12-201ENST00000342665 CHD6Q8TD26 2715 aa13.33□□□□□ -0.28
SOX12-201ENST00000342665 CHTF8P0CG12 524 aa13.32□□□□□ -0.28
SOX12-201ENST00000342665 LIMD2Q9BT23 127 aa13.32□□□□□ -0.28
SOX12-201ENST00000342665 LAMA1P25391 3075 aa13.29□□□□□ -0.28
SOX12-201ENST00000342665 DSPP15924 2871 aaKnown RBP13.28□□□□□ -0.28
SOX12-201ENST00000342665 CELSR3Q9NYQ7 3312 aa13.28□□□□□ -0.28
SOX12-201ENST00000342665 RETNLBQ9BQ08 111 aa13.28□□□□□ -0.28
SOX12-201ENST00000342665 H3BPC8 53 aa13.27□□□□□ -0.29
SOX12-201ENST00000342665 PMAIP1Q13794 54 aa13.27□□□□□ -0.29
SOX12-201ENST00000342665 K7EIL1 84 aa13.25□□□□□ -0.29
SOX12-201ENST00000342665 RTL8CO15255 209 aa13.25□□□□□ -0.29
SOX12-201ENST00000342665 SZT2Q5T011 3432 aa13.25□□□□□ -0.29
SOX12-201ENST00000342665 C9orf129Q5T035 196 aaKnown RBP13.23□□□□□ -0.29
SOX12-201ENST00000342665 VCANP13611 3396 aa13.23□□□□□ -0.29
SOX12-201ENST00000342665 FAM104AQ969W3 186 aa13.23□□□□□ -0.29
SOX12-201ENST00000342665 TRAV22A0A0B4J277 110 aa13.22□□□□□ -0.29
SOX12-201ENST00000342665 TLX1NBP0CAT3 122 aa13.21□□□□□ -0.29
SOX12-201ENST00000342665 Q8N377 158 aa13.21□□□□□ -0.29
SOX12-201ENST00000342665 ERC2-IT1O76042 136 aa13.2□□□□□ -0.3
SOX12-201ENST00000342665 LINC01600Q96MT4 127 aa13.2□□□□□ -0.3
SOX12-201ENST00000342665 RPL37AP61513 92 aaKnown RBP13.19□□□□□ -0.3
SOX12-201ENST00000342665 K7EQZ3 153 aa13.18□□□□□ -0.3
SOX12-201ENST00000342665 PLA2G2DQ9UNK4 145 aa13.18□□□□□ -0.3
SOX12-201ENST00000342665 DNAH14Q0VDD8 3507 aa13.17□□□□□ -0.3
SOX12-201ENST00000342665 FRYQ5TBA9 3013 aa13.17□□□□□ -0.3
SOX12-201ENST00000342665 SPACA4Q8TDM5 124 aa13.16□□□□□ -0.3
SOX12-201ENST00000342665 IGKV2D-30A0A075B6S6 120 aa13.15□□□□□ -0.3
SOX12-201ENST00000342665 IGKV2-30P06310 120 aa13.15□□□□□ -0.3
SOX12-201ENST00000342665 PRO0628Q9UI54 55 aa13.15□□□□□ -0.3
SOX12-201ENST00000342665 A8MWP4 228 aa13.15□□□□□ -0.3
SOX12-201ENST00000342665 C4orf26Q17RF5 130 aa13.14□□□□□ -0.31
SOX12-201ENST00000342665 IGFL1Q6UW32 110 aa13.14□□□□□ -0.31
SOX12-201ENST00000342665 SPINK1P00995 79 aa13.13□□□□□ -0.31
SOX12-201ENST00000342665 KLKP1Q107X0 134 aa13.12□□□□□ -0.31
SOX12-201ENST00000342665 TEP1Q99973 2627 aaKnown RBP13.12□□□□□ -0.31
SOX12-201ENST00000342665 FREM2Q5SZK8 3169 aa13.12□□□□□ -0.31
SOX12-201ENST00000342665 TEX15Q9BXT5 2789 aa13.12□□□□□ -0.31
SOX12-201ENST00000342665 NBEAQ8NFP9 2946 aa13.11□□□□□ -0.31
SOX12-201ENST00000342665 C9orf163Q8N9P6 203 aa13.1□□□□□ -0.31
SOX12-201ENST00000342665 OBSCN-AS1Q96MR7 158 aa13.08□□□□□ -0.32
SOX12-201ENST00000342665 ACYP2P14621 99 aa13.08□□□□□ -0.32
SOX12-201ENST00000342665 LINC00313P59037 77 aa13.05□□□□□ -0.32
SOX12-201ENST00000342665 GCN1Q92616 2671 aaKnown RBP13.05□□□□□ -0.32
SOX12-201ENST00000342665 CASC10Q5T4H9 136 aa13.04□□□□□ -0.32
SOX12-201ENST00000342665 PRR15Q8IV56 129 aa13.04□□□□□ -0.32
SOX12-201ENST00000342665 CR1P17927 2039 aa13.02□□□□□ -0.32
SOX12-201ENST00000342665 IGSF10Q6WRI0 2623 aa13.02□□□□□ -0.33
SOX12-201ENST00000342665 STAB1Q9NY15 2570 aa13.02□□□□□ -0.33
SOX12-201ENST00000342665 A0A1W2PNM2 257 aa13□□□□□ -0.33
SOX12-201ENST00000342665 UNC79Q9P2D8 2635 aa13□□□□□ -0.33
SOX12-201ENST00000342665 MRPL34Q9BQ48 92 aaKnown RBP13□□□□□ -0.33
SOX12-201ENST00000342665 TYMSOSQ8TAI1 123 aa13□□□□□ -0.33
SOX12-201ENST00000342665 WWC2-AS2Q96NR7 200 aa12.99□□□□□ -0.33
SOX12-201ENST00000342665 CNBPP62633 177 aaKnown RBP12.99□□□□□ -0.33
SOX12-201ENST00000342665 SPAG11AQ6PDA7 123 aa12.99□□□□□ -0.33
SOX12-201ENST00000342665 COL6A5A8TX70 2615 aa12.98□□□□□ -0.33
SOX12-201ENST00000342665 LOC101927531A0A1B0GV80 90 aa12.98□□□□□ -0.33
SOX12-201ENST00000342665 A0A1W2PNN7 141 aa12.98□□□□□ -0.33
SOX12-201ENST00000342665 H7BZZ5 65 aa12.98□□□□□ -0.33
SOX12-201ENST00000342665 NOTCH1P46531 2555 aa12.98□□□□□ -0.33
SOX12-201ENST00000342665 IGLV5-48A0A075B6I7 105 aa12.97□□□□□ -0.33
SOX12-201ENST00000342665 A0A0G2JQZ4 141 aa12.97□□□□□ -0.33
SOX12-201ENST00000342665 C7orf65Q6ZTY9 151 aa12.97□□□□□ -0.33
SOX12-201ENST00000342665 C8orf87E5RJ46 101 aa12.97□□□□□ -0.33
SOX12-201ENST00000342665 ZNF861PO60384 105 aa12.97□□□□□ -0.33
SOX12-201ENST00000342665 A0A087WTM6 91 aa12.97□□□□□ -0.33
SOX12-201ENST00000342665 WIPF1O43516 503 aa12.97□□□□□ -0.33
SOX12-201ENST00000342665 A0A1B0GU69 56 aa12.96□□□□□ -0.33
SOX12-201ENST00000342665 IGLV5-37A0A075B6J1 123 aa12.96□□□□□ -0.34
SOX12-201ENST00000342665 FAM229AH3BQW9 127 aa12.94□□□□□ -0.34
SOX12-201ENST00000342665 SSBP3-AS1Q7Z2R9 100 aa12.93□□□□□ -0.34
SOX12-201ENST00000342665 APLNQ9ULZ1 77 aa12.93□□□□□ -0.34
SOX12-201ENST00000342665 C8orf17Q9NRJ1 99 aa12.92□□□□□ -0.34
SOX12-201ENST00000342665 FRYLO94915 3013 aa12.92□□□□□ -0.34
SOX12-201ENST00000342665 BOD1L1Q8NFC6 3051 aa12.9□□□□□ -0.34
SOX12-201ENST00000342665 UBR5O95071 2799 aaPredicted RBP12.9□□□□□ -0.34
SOX12-201ENST00000342665 PLA2G1BP04054 148 aaKnown RBP12.87□□□□□ -0.35
SOX12-201ENST00000342665 A0A1B0GVX0 72 aa12.87□□□□□ -0.35
SOX12-201ENST00000342665 SETXQ7Z333 2677 aaKnown RBP12.87□□□□□ -0.35
SOX12-201ENST00000342665 SPEGQ15772 3267 aa12.86□□□□□ -0.35
SOX12-201ENST00000342665 NBEAL2Q6ZNJ1 2754 aa12.86□□□□□ -0.35
SOX12-201ENST00000342665 FLNCQ14315 2725 aa12.84□□□□□ -0.35
SOX12-201ENST00000342665 COA5Q86WW8 74 aa12.84□□□□□ -0.35
SOX12-201ENST00000342665 NBEAL1Q6ZS30 2694 aa12.83□□□□□ -0.36
SOX12-201ENST00000342665 SPRR4Q96PI1 79 aa12.82□□□□□ -0.36
SOX12-201ENST00000342665 PSORS1C2Q9UIG4 136 aa12.82□□□□□ -0.36
SOX12-201ENST00000342665 Q96NJ1 140 aa12.82□□□□□ -0.36
SOX12-201ENST00000342665 A8MUN3 132 aa12.81□□□□□ -0.36
SOX12-201ENST00000342665 ADGRG4Q8IZF6 3080 aa12.81□□□□□ -0.36
SOX12-201ENST00000342665 COL6A3P12111 3177 aa12.81□□□□□ -0.36
SOX12-201ENST00000342665 KALRNO60229 2985 aa12.79□□□□□ -0.36
SOX12-201ENST00000342665 Q8NDZ9 215 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms