RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 HIST1H2BNQ99877 126 aa13.54□□□□□ -0.24
CDKN3-202ENST00000335183 HIST1H2BMQ99879 126 aa13.54□□□□□ -0.24
CDKN3-202ENST00000335183 LEPROTO15243 131 aa13.53□□□□□ -0.24
CDKN3-202ENST00000335183 MIEN1Q9BRT3 115 aa13.53□□□□□ -0.24
CDKN3-202ENST00000335183 HSPB8Q9UJY1 196 aa13.53□□□□□ -0.24
CDKN3-202ENST00000335183 S100A7L2Q5SY68 101 aa13.52□□□□□ -0.25
CDKN3-202ENST00000335183 SPANXB1Q9NS25 103 aaPredicted RBP13.52□□□□□ -0.25
CDKN3-202ENST00000335183 XP32Q5T750 250 aa13.51□□□□□ -0.25
CDKN3-202ENST00000335183 LCE2DQ5TA82 110 aaPredicted RBP13.49□□□□□ -0.25
CDKN3-202ENST00000335183 J3QQQ9 107 aa13.48□□□□□ -0.25
CDKN3-202ENST00000335183 FABP4P15090 132 aa13.48□□□□□ -0.25
CDKN3-202ENST00000335183 JOSD1Q15040 202 aaPredicted RBP13.48□□□□□ -0.25
CDKN3-202ENST00000335183 TRAV23DV6A0A075B6W5 121 aa13.47□□□□□ -0.25
CDKN3-202ENST00000335183 IGLV6-57P01721 117 aa13.47□□□□□ -0.25
CDKN3-202ENST00000335183 NDUFC2O95298 119 aa13.45□□□□□ -0.26
CDKN3-202ENST00000335183 LGALS3P17931 250 aaKnown RBP13.44□□□□□ -0.26
CDKN3-202ENST00000335183 PLNP26678 52 aa13.44□□□□□ -0.26
CDKN3-202ENST00000335183 HERVK_113P61574 105 aa13.44□□□□□ -0.26
CDKN3-202ENST00000335183 NPC2P61916 151 aa13.44□□□□□ -0.26
CDKN3-202ENST00000335183 ST20-AS1Q8NBB2 130 aa13.44□□□□□ -0.26
CDKN3-202ENST00000335183 NMUP48645 174 aa13.43□□□□□ -0.26
CDKN3-202ENST00000335183 ZNF73O43830 326 aaPredicted RBP13.42□□□□□ -0.26
CDKN3-202ENST00000335183 COA6Q5JTJ3 125 aaKnown RBP13.41□□□□□ -0.26
CDKN3-202ENST00000335183 PMCHL2Q9BQD1 86 aa13.41□□□□□ -0.26
CDKN3-202ENST00000335183 DPM2O94777 84 aa13.4□□□□□ -0.26
CDKN3-202ENST00000335183 SOSTDC1Q6X4U4 206 aa13.4□□□□□ -0.26
CDKN3-202ENST00000335183 EIF4EBP3O60516 100 aaPredicted RBP13.37□□□□□ -0.27
CDKN3-202ENST00000335183 IGKCP01834 107 aa13.37□□□□□ -0.27
CDKN3-202ENST00000335183 HINT1P49773 126 aaPredicted RBP13.37□□□□□ -0.27
CDKN3-202ENST00000335183 LCE2CQ5TA81 110 aa13.37□□□□□ -0.27
CDKN3-202ENST00000335183 HRCT1Q6UXD1 115 aa13.36□□□□□ -0.27
CDKN3-202ENST00000335183 SYS1-DBNDD2H3BUS1 97 aa13.35□□□□□ -0.27
CDKN3-202ENST00000335183 ADAMTSL4-AS1Q5T5F5 129 aa13.35□□□□□ -0.27
CDKN3-202ENST00000335183 A0A0J9YXY3 114 aa13.34□□□□□ -0.27
CDKN3-202ENST00000335183 LIMD2Q9BT23 127 aa13.34□□□□□ -0.27
CDKN3-202ENST00000335183 CRCT1Q9UGL9 99 aa13.34□□□□□ -0.27
CDKN3-202ENST00000335183 C5orf52A6NGY3 159 aa13.33□□□□□ -0.28
CDKN3-202ENST00000335183 PCOTHQ58A44 107 aa13.32□□□□□ -0.28
CDKN3-202ENST00000335183 CBY1Q9Y3M2 126 aa13.32□□□□□ -0.28
CDKN3-202ENST00000335183 FSIP2Q5CZC0 6907 aa13.31□□□□□ -0.28
CDKN3-202ENST00000335183 C9orf92A6NGG3 77 aa13.31□□□□□ -0.28
CDKN3-202ENST00000335183 PET117Q6UWS5 81 aa13.31□□□□□ -0.28
CDKN3-202ENST00000335183 IGLV8-61A0A075B6I0 122 aa13.3□□□□□ -0.28
CDKN3-202ENST00000335183 LINC01545Q5VT33 79 aa13.3□□□□□ -0.28
CDKN3-202ENST00000335183 OR13C6PQ8NH95 151 aa13.3□□□□□ -0.28
CDKN3-202ENST00000335183 KRTAP19-2Q3LHN2 52 aa13.29□□□□□ -0.28
CDKN3-202ENST00000335183 SLC25A34Q6PIV7 304 aa13.29□□□□□ -0.28
CDKN3-202ENST00000335183 S100A6P06703 90 aa13.28□□□□□ -0.28
CDKN3-202ENST00000335183 SPRR1BP22528 89 aa13.28□□□□□ -0.28
CDKN3-202ENST00000335183 LINC00518Q8N0U6 118 aa13.28□□□□□ -0.28
CDKN3-202ENST00000335183 E9PLD3 99 aa13.26□□□□□ -0.29
CDKN3-202ENST00000335183 C3orf79P0CE67 100 aa13.26□□□□□ -0.29
CDKN3-202ENST00000335183 MT1HP80294 61 aa13.26□□□□□ -0.29
CDKN3-202ENST00000335183 DHRS4-AS1Q9P1J3 65 aa13.26□□□□□ -0.29
CDKN3-202ENST00000335183 LAMTOR3Q9UHA4 124 aa13.26□□□□□ -0.29
CDKN3-202ENST00000335183 SPANXCQ9NY87 97 aa13.25□□□□□ -0.29
CDKN3-202ENST00000335183 LINC00308Q8TCZ7 52 aa13.24□□□□□ -0.29
CDKN3-202ENST00000335183 SMIM6P0DI80 62 aa13.23□□□□□ -0.29
CDKN3-202ENST00000335183 KRTDAPP60985 99 aa13.22□□□□□ -0.29
CDKN3-202ENST00000335183 LITAFQ99732 161 aa13.2□□□□□ -0.3
CDKN3-202ENST00000335183 CFC1BP0CG36 223 aa13.19□□□□□ -0.3
CDKN3-202ENST00000335183 AKR1D1P51857 326 aa13.19□□□□□ -0.3
CDKN3-202ENST00000335183 Q1RN00 199 aa13.19□□□□□ -0.3
CDKN3-202ENST00000335183 DEFB105AQ8NG35 78 aa13.19□□□□□ -0.3
CDKN3-202ENST00000335183 COX7BP24311 80 aa13.18□□□□□ -0.3
CDKN3-202ENST00000335183 TAL2Q16559 108 aa13.18□□□□□ -0.3
CDKN3-202ENST00000335183 SPANXDQ9BXN6 97 aa13.18□□□□□ -0.3
CDKN3-202ENST00000335183 C20orf202A1L168 122 aa13.17□□□□□ -0.3
CDKN3-202ENST00000335183 H7C2G1 150 aa13.16□□□□□ -0.3
CDKN3-202ENST00000335183 ELOF1P60002 83 aaKnown RBP13.16□□□□□ -0.3
CDKN3-202ENST00000335183 C6orf99Q4VX62 202 aa13.16□□□□□ -0.3
CDKN3-202ENST00000335183 TIMM17BO60830 172 aa13.15□□□□□ -0.3
CDKN3-202ENST00000335183 HIST3H2BBQ8N257 126 aa13.15□□□□□ -0.3
CDKN3-202ENST00000335183 PRO1933Q9H354 126 aa13.15□□□□□ -0.3
CDKN3-202ENST00000335183 SNRPEP62304 92 aaKnown RBP13.14□□□□□ -0.31
CDKN3-202ENST00000335183 CD164Q04900 197 aa13.14□□□□□ -0.31
CDKN3-202ENST00000335183 C12orf57Q99622 126 aa13.14□□□□□ -0.31
CDKN3-202ENST00000335183 TEX49A0A1B0GTD5 131 aa13.11□□□□□ -0.31
CDKN3-202ENST00000335183 ZNF815PA8K554 130 aa13.11□□□□□ -0.31
CDKN3-202ENST00000335183 S100A2P29034 98 aa13.11□□□□□ -0.31
CDKN3-202ENST00000335183 HIST1H2BLQ99880 126 aa13.11□□□□□ -0.31
CDKN3-202ENST00000335183 TTTY13Q9BZ97 58 aa13.08□□□□□ -0.32
CDKN3-202ENST00000335183 LORP23490 312 aaPredicted RBP13.07□□□□□ -0.32
CDKN3-202ENST00000335183 KRTAP10-6P60371 365 aaPredicted RBP13.06□□□□□ -0.32
CDKN3-202ENST00000335183 C1orf195Q5TG92 126 aa13.06□□□□□ -0.32
CDKN3-202ENST00000335183 A0A0G2JQZ4 141 aa13.05□□□□□ -0.32
CDKN3-202ENST00000335183 M0R2T5 61 aa13.05□□□□□ -0.32
CDKN3-202ENST00000335183 Q5XG85 94 aa13.05□□□□□ -0.32
CDKN3-202ENST00000335183 SMIM29Q86T20 159 aa13.05□□□□□ -0.32
CDKN3-202ENST00000335183 ATOH7Q8N100 152 aa13.05□□□□□ -0.32
CDKN3-202ENST00000335183 ANKRD39Q53RE8 183 aa13.04□□□□□ -0.32
CDKN3-202ENST00000335183 RPL37P61927 97 aaKnown RBP13.02□□□□□ -0.33
CDKN3-202ENST00000335183 TRBV7-6A0A0J9YX20 115 aa13.01□□□□□ -0.33
CDKN3-202ENST00000335183 COX6B2Q6YFQ2 88 aa13.01□□□□□ -0.33
CDKN3-202ENST00000335183 A0A1B0GWB2 263 aa13□□□□□ -0.33
CDKN3-202ENST00000335183 IGLV5-48A0A075B6I7 105 aa12.97□□□□□ -0.33
CDKN3-202ENST00000335183 A6NDN8 102 aa12.97□□□□□ -0.33
CDKN3-202ENST00000335183 SCGB1D4Q6XE38 83 aa12.97□□□□□ -0.33
CDKN3-202ENST00000335183 PCP4L1A6NKN8 68 aa12.94□□□□□ -0.34
CDKN3-202ENST00000335183 PCP2Q8IVA1 136 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms