RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 Q6ZQY7 126 aa9.31□□□□□ -0.92
SF1-202ENST00000334944 CYSRT1A8MQ03 144 aa9.3□□□□□ -0.92
SF1-202ENST00000334944 MGAM2Q2M2H8 2515 aa9.29□□□□□ -0.92
SF1-202ENST00000334944 BPY2O14599 106 aa9.29□□□□□ -0.92
SF1-202ENST00000334944 HIGD2BQ4VC39 106 aa9.29□□□□□ -0.92
SF1-202ENST00000334944 KPRPQ5T749 579 aaPredicted RBP9.28□□□□□ -0.92
SF1-202ENST00000334944 XAGE1AQ9HD64 81 aa9.28□□□□□ -0.92
SF1-202ENST00000334944 LINC00575Q6W349 94 aa9.28□□□□□ -0.92
SF1-202ENST00000334944 HIGD2AQ9BW72 106 aa9.28□□□□□ -0.92
SF1-202ENST00000334944 ZNF561-AS1K7EIQ3 104 aa9.27□□□□□ -0.93
SF1-202ENST00000334944 FUSP35637 526 aaKnown RBP eCLIP9.26□□□□□ -0.935e-13■□□□□ 10.2
SF1-202ENST00000334944 A0A0J9YWU9 116 aa9.25□□□□□ -0.93
SF1-202ENST00000334944 ESRGQ1W209 222 aa9.25□□□□□ -0.93
SF1-202ENST00000334944 PSPHP1O15172 72 aa9.25□□□□□ -0.93
SF1-202ENST00000334944 MUC7Q8TAX7 377 aa9.25□□□□□ -0.93
SF1-202ENST00000334944 NDUFC1O43677 76 aa9.24□□□□□ -0.93
SF1-202ENST00000334944 BCE1O60756 84 aa9.24□□□□□ -0.93
SF1-202ENST00000334944 PRR34Q9NV39 138 aa9.24□□□□□ -0.93
SF1-202ENST00000334944 PRYO14603 147 aa9.23□□□□□ -0.93
SF1-202ENST00000334944 LOC110117498A0A087WWA1 95 aa9.23□□□□□ -0.93
SF1-202ENST00000334944 PRR4Q16378 134 aa9.23□□□□□ -0.93
SF1-202ENST00000334944 CXCL6P80162 114 aa9.22□□□□□ -0.93
SF1-202ENST00000334944 PMAIP1Q13794 54 aa9.22□□□□□ -0.93
SF1-202ENST00000334944 C6orf48Q9UBA6 75 aa9.22□□□□□ -0.93
SF1-202ENST00000334944 A8MU10 97 aa9.21□□□□□ -0.94
SF1-202ENST00000334944 COX17Q14061 63 aa9.21□□□□□ -0.94
SF1-202ENST00000334944 BAHCC1Q9P281 2608 aa9.2□□□□□ -0.94
SF1-202ENST00000334944 CMYA5Q8N3K9 4069 aa9.2□□□□□ -0.94
SF1-202ENST00000334944 ATP5EP56381 51 aaPredicted RBP9.19□□□□□ -0.94
SF1-202ENST00000334944 DEFB131BA0A096LNP1 70 aa9.18□□□□□ -0.94
SF1-202ENST00000334944 FAM30AQ9NZY2 134 aa9.18□□□□□ -0.94
SF1-202ENST00000334944 C3orf84H3BNL1 204 aa9.18□□□□□ -0.94
SF1-202ENST00000334944 CAMK2N2Q96S95 79 aa9.18□□□□□ -0.94
SF1-202ENST00000334944 IGKV2D-24A0A075B6R9 120 aa9.17□□□□□ -0.94
SF1-202ENST00000334944 C11orf45Q8TAV5 145 aa9.17□□□□□ -0.94
SF1-202ENST00000334944 STAB2Q8WWQ8 2551 aa9.16□□□□□ -0.94
SF1-202ENST00000334944 Q6ZRP5 223 aa9.16□□□□□ -0.94
SF1-202ENST00000334944 Q6ZRU5 148 aa9.16□□□□□ -0.94
SF1-202ENST00000334944 IGKV4-1P06312 121 aa9.15□□□□□ -0.95
SF1-202ENST00000334944 OCR1Q9BZK8 76 aa9.15□□□□□ -0.95
SF1-202ENST00000334944 EGFEM1PQ0D2K5 195 aa9.14□□□□□ -0.95
SF1-202ENST00000334944 C15orf56Q8N910 161 aa9.13□□□□□ -0.95
SF1-202ENST00000334944 KRTAP26-1Q6PEX3 210 aa9.13□□□□□ -0.95
SF1-202ENST00000334944 C1orf64Q8NEQ6 169 aa9.12□□□□□ -0.95
SF1-202ENST00000334944 TENM2Q9NT68 2774 aa9.11□□□□□ -0.95
SF1-202ENST00000334944 hDV103S1A0JD37 113 aa9.1□□□□□ -0.95
SF1-202ENST00000334944 SMIM29Q86T20 159 aa9.1□□□□□ -0.95
SF1-202ENST00000334944 IGLV6-57P01721 117 aa9.1□□□□□ -0.95
SF1-202ENST00000334944 PRR15Q8IV56 129 aa9.1□□□□□ -0.95
SF1-202ENST00000334944 PDE6GP18545 87 aa9.08□□□□□ -0.96
SF1-202ENST00000334944 CASC10Q5T4H9 136 aa9.08□□□□□ -0.96
SF1-202ENST00000334944 COL7A1Q02388 2944 aa9.07□□□□□ -0.96
SF1-202ENST00000334944 H3BNG1 76 aa9.07□□□□□ -0.96
SF1-202ENST00000334944 GVQW2A0A096LPI5 108 aaPredicted RBP9.07□□□□□ -0.96
SF1-202ENST00000334944 A8MUN3 132 aa9.07□□□□□ -0.96
SF1-202ENST00000334944 DEFB105AQ8NG35 78 aa9.07□□□□□ -0.96
SF1-202ENST00000334944 DIRC1Q969H9 104 aa9.07□□□□□ -0.96
SF1-202ENST00000334944 LYSTQ99698 3801 aa9.07□□□□□ -0.96
SF1-202ENST00000334944 TRAV22A0A0B4J277 110 aa9.06□□□□□ -0.96
SF1-202ENST00000334944 ZNF73O43830 326 aaPredicted RBP9.06□□□□□ -0.96
SF1-202ENST00000334944 ERC2-IT1O76042 136 aa9.05□□□□□ -0.96
SF1-202ENST00000334944 VPREB1P12018 145 aa9.05□□□□□ -0.96
SF1-202ENST00000334944 COX7BP24311 80 aa9.05□□□□□ -0.96
SF1-202ENST00000334944 LINC01556Q5JQF7 62 aa9.05□□□□□ -0.96
SF1-202ENST00000334944 CSMD3Q7Z407 3707 aa9.04□□□□□ -0.96
SF1-202ENST00000334944 LINC00588Q9Y4M8 146 aa9.04□□□□□ -0.96
SF1-202ENST00000334944 SYCNQ0VAF6 134 aa9.02□□□□□ -0.97
SF1-202ENST00000334944 DNAH3Q8TD57 4116 aa9.02□□□□□ -0.97
SF1-202ENST00000334944 K7EIL1 84 aa9.01□□□□□ -0.97
SF1-202ENST00000334944 SERTAD4-AS1Q5TG53 156 aa9.01□□□□□ -0.97
SF1-202ENST00000334944 FAM168BA1KXE4 195 aa9.01□□□□□ -0.97
SF1-202ENST00000334944 HUWE1Q7Z6Z7 4374 aaKnown RBP9□□□□□ -0.97
SF1-202ENST00000334944 RPL37AP8A6NKH3 93 aa9□□□□□ -0.97
SF1-202ENST00000334944 Q1T7F1 81 aa9□□□□□ -0.97
SF1-202ENST00000334944 SPTSSBQ8NFR3 76 aa8.99□□□□□ -0.97
SF1-202ENST00000334944 ST20-AS1Q8NBB2 130 aa8.99□□□□□ -0.97
SF1-202ENST00000334944 DEFB116Q30KQ4 102 aa8.99□□□□□ -0.97
SF1-202ENST00000334944 M0R378 163 aa8.98□□□□□ -0.97
SF1-202ENST00000334944 DNAH10OSP0CZ25 163 aa8.98□□□□□ -0.97
SF1-202ENST00000334944 ELOF1P60002 83 aaKnown RBP8.97□□□□□ -0.97
SF1-202ENST00000334944 NKAPP1Q8N9T2 125 aa8.96□□□□□ -0.98
SF1-202ENST00000334944 DNAH10Q8IVF4 4471 aa8.95□□□□□ -0.98
SF1-202ENST00000334944 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.95□□□□□ -0.98
SF1-202ENST00000334944 CD164Q04900 197 aa8.94□□□□□ -0.98
SF1-202ENST00000334944 C7orf33Q8WU49 177 aa8.94□□□□□ -0.98
SF1-202ENST00000334944 PSCAO43653 123 aa8.93□□□□□ -0.98
SF1-202ENST00000334944 CHKB-CPT1BH3BT56 60 aa8.93□□□□□ -0.98
SF1-202ENST00000334944 LINC00528Q8N1L1 170 aa8.92□□□□□ -0.98
SF1-202ENST00000334944 MRPL55Q7Z7F7 128 aaKnown RBP8.92□□□□□ -0.98
SF1-202ENST00000334944 Q5VV11 94 aa8.91□□□□□ -0.98
SF1-202ENST00000334944 K7EQZ3 153 aa8.91□□□□□ -0.98
SF1-202ENST00000334944 A0A0G2JQZ4 141 aa8.9□□□□□ -0.98
SF1-202ENST00000334944 A0A1W2PNN7 141 aa8.9□□□□□ -0.98
SF1-202ENST00000334944 RBM12B-AS1Q9P1G2 102 aa8.9□□□□□ -0.98
SF1-202ENST00000334944 KRTAP1-5Q9BYS1 174 aa8.89□□□□□ -0.99
SF1-202ENST00000334944 SRRM2Q9UQ35 2752 aaKnown RBP8.89□□□□□ -0.99
SF1-202ENST00000334944 KRTAP7-1Q8IUC3 87 aa8.89□□□□□ -0.99
SF1-202ENST00000334944 C16orf90A8MZG2 172 aa8.88□□□□□ -0.99
SF1-202ENST00000334944 ZCCHC13Q8WW36 166 aaKnown RBP8.88□□□□□ -0.99
SF1-202ENST00000334944 ETDCA0A1B0GVM5 59 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms