RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 LRCOL1A6NCL2 159 aa9.24□□□□□ -0.93
SYNE3-201ENST00000334258 NDUFC1O43677 76 aa9.24□□□□□ -0.93
SYNE3-201ENST00000334258 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.24□□□□□ -0.93
SYNE3-201ENST00000334258 DEFB135Q30KP9 77 aa9.23□□□□□ -0.93
SYNE3-201ENST00000334258 ANK2Q01484 3957 aa9.23□□□□□ -0.93
SYNE3-201ENST00000334258 TMEM254Q8TBM7 123 aa9.23□□□□□ -0.93
SYNE3-201ENST00000334258 A0A0J9YWU9 116 aa9.22□□□□□ -0.93
SYNE3-201ENST00000334258 IGHV4-30-4P0DP06 118 aa9.22□□□□□ -0.93
SYNE3-201ENST00000334258 TRBV7-4A0A0J9YYF1 115 aa9.22□□□□□ -0.93
SYNE3-201ENST00000334258 TENM3Q9P273 2699 aa9.21□□□□□ -0.93
SYNE3-201ENST00000334258 CD164Q04900 197 aa9.2□□□□□ -0.94
SYNE3-201ENST00000334258 C6orf48Q9UBA6 75 aa9.2□□□□□ -0.94
SYNE3-201ENST00000334258 LYRM9A8MSI8 78 aa9.2□□□□□ -0.94
SYNE3-201ENST00000334258 HIGD2BQ4VC39 106 aa9.2□□□□□ -0.94
SYNE3-201ENST00000334258 C3orf84H3BNL1 204 aa9.18□□□□□ -0.94
SYNE3-201ENST00000334258 CAMK2N2Q96S95 79 aa9.18□□□□□ -0.94
SYNE3-201ENST00000334258 DEFB105AQ8NG35 78 aa9.17□□□□□ -0.94
SYNE3-201ENST00000334258 ELOF1P60002 83 aaKnown RBP9.17□□□□□ -0.94
SYNE3-201ENST00000334258 ATP5EP56381 51 aaPredicted RBP9.16□□□□□ -0.94
SYNE3-201ENST00000334258 OXLD1Q5BKU9 147 aa9.16□□□□□ -0.94
SYNE3-201ENST00000334258 PRR15Q8IV56 129 aa9.16□□□□□ -0.94
SYNE3-201ENST00000334258 MRPL55Q7Z7F7 128 aaKnown RBP9.16□□□□□ -0.94
SYNE3-201ENST00000334258 LELP1Q5T871 98 aa9.15□□□□□ -0.94
SYNE3-201ENST00000334258 PSPHP1O15172 72 aa9.14□□□□□ -0.95
SYNE3-201ENST00000334258 ESRGQ1W209 222 aa9.14□□□□□ -0.95
SYNE3-201ENST00000334258 C4orf48Q5BLP8 95 aa9.14□□□□□ -0.95
SYNE3-201ENST00000334258 Q6ZRU5 148 aa9.14□□□□□ -0.95
SYNE3-201ENST00000334258 CELA1Q9UNI1 258 aa9.14□□□□□ -0.95
SYNE3-201ENST00000334258 PRYO14603 147 aa9.13□□□□□ -0.95
SYNE3-201ENST00000334258 PRB2P02812 416 aaPredicted RBP9.13□□□□□ -0.95
SYNE3-201ENST00000334258 FUSP35637 526 aaKnown RBP eCLIP9.13□□□□□ -0.95
SYNE3-201ENST00000334258 GVQW2A0A096LPI5 108 aaPredicted RBP9.12□□□□□ -0.95
SYNE3-201ENST00000334258 M0R378 163 aa9.12□□□□□ -0.95
SYNE3-201ENST00000334258 A8MU10 97 aa9.12□□□□□ -0.95
SYNE3-201ENST00000334258 IGKV4-1P06312 121 aa9.11□□□□□ -0.95
SYNE3-201ENST00000334258 VPREB1P12018 145 aa9.11□□□□□ -0.95
SYNE3-201ENST00000334258 HIGD2AQ9BW72 106 aa9.11□□□□□ -0.95
SYNE3-201ENST00000334258 PRR34Q9NV39 138 aa9.11□□□□□ -0.95
SYNE3-201ENST00000334258 SPART-AS1P0CW21 52 aa9.1□□□□□ -0.95
SYNE3-201ENST00000334258 LINC00528Q8N1L1 170 aa9.09□□□□□ -0.95
SYNE3-201ENST00000334258 KRTAP24-1Q3LI83 254 aa9.09□□□□□ -0.95
SYNE3-201ENST00000334258 C11orf45Q8TAV5 145 aa9.09□□□□□ -0.95
SYNE3-201ENST00000334258 ERC2-IT1O76042 136 aa9.09□□□□□ -0.95
SYNE3-201ENST00000334258 APOC4P55056 127 aa9.08□□□□□ -0.96
SYNE3-201ENST00000334258 OCR1Q9BZK8 76 aa9.08□□□□□ -0.96
SYNE3-201ENST00000334258 FAM30AQ9NZY2 134 aa9.08□□□□□ -0.96
SYNE3-201ENST00000334258 RBM12B-AS1Q9P1G2 102 aa9.07□□□□□ -0.96
SYNE3-201ENST00000334258 EGFEM1PQ0D2K5 195 aa9.07□□□□□ -0.96
SYNE3-201ENST00000334258 NKAPP1Q8N9T2 125 aa9.05□□□□□ -0.96
SYNE3-201ENST00000334258 SMIM29Q86T20 159 aa9.04□□□□□ -0.96
SYNE3-201ENST00000334258 WFDC10BQ8IUB3 73 aa9.04□□□□□ -0.96
SYNE3-201ENST00000334258 Q8NAQ8 132 aa9.03□□□□□ -0.96
SYNE3-201ENST00000334258 KPRPQ5T749 579 aaPredicted RBP9.02□□□□□ -0.96
SYNE3-201ENST00000334258 Q6ZRP5 223 aa9.02□□□□□ -0.96
SYNE3-201ENST00000334258 TENM2Q9NT68 2774 aa9.02□□□□□ -0.97
SYNE3-201ENST00000334258 STAB2Q8WWQ8 2551 aa9.01□□□□□ -0.97
SYNE3-201ENST00000334258 Q6ZTC4 211 aa9□□□□□ -0.97
SYNE3-201ENST00000334258 Q8N377 158 aa9□□□□□ -0.97
SYNE3-201ENST00000334258 IGKV2D-24A0A075B6R9 120 aa9□□□□□ -0.97
SYNE3-201ENST00000334258 RPL37AP8A6NKH3 93 aa8.99□□□□□ -0.97
SYNE3-201ENST00000334258 KRTAP10-11P60412 298 aa8.98□□□□□ -0.97
SYNE3-201ENST00000334258 SPTSSBQ8NFR3 76 aa8.98□□□□□ -0.97
SYNE3-201ENST00000334258 C15orf56Q8N910 161 aa8.98□□□□□ -0.97
SYNE3-201ENST00000334258 PRR4Q16378 134 aa8.97□□□□□ -0.97
SYNE3-201ENST00000334258 SYCNQ0VAF6 134 aa8.97□□□□□ -0.97
SYNE3-201ENST00000334258 C1orf137Q5JT78 98 aa8.97□□□□□ -0.97
SYNE3-201ENST00000334258 C7orf33Q8WU49 177 aa8.97□□□□□ -0.97
SYNE3-201ENST00000334258 A8MUN3 132 aa8.95□□□□□ -0.98
SYNE3-201ENST00000334258 SERTAD4-AS1Q5TG53 156 aa8.95□□□□□ -0.98
SYNE3-201ENST00000334258 TRAV22A0A0B4J277 110 aa8.95□□□□□ -0.98
SYNE3-201ENST00000334258 A0A1W2PNM2 257 aa8.95□□□□□ -0.98
SYNE3-201ENST00000334258 ETDCA0A1B0GVM5 59 aa8.95□□□□□ -0.98
SYNE3-201ENST00000334258 IGLV5-48A0A075B6I7 105 aa8.94□□□□□ -0.98
SYNE3-201ENST00000334258 KCNQ1DNQ9H478 68 aa8.94□□□□□ -0.98
SYNE3-201ENST00000334258 CMYA5Q8N3K9 4069 aa8.94□□□□□ -0.98
SYNE3-201ENST00000334258 KTN1-AS1Q86SY8 53 aa8.93□□□□□ -0.98
SYNE3-201ENST00000334258 ST20-AS1Q8NBB2 130 aa8.93□□□□□ -0.98
SYNE3-201ENST00000334258 hDV103S1A0JD37 113 aa8.93□□□□□ -0.98
SYNE3-201ENST00000334258 C1orf64Q8NEQ6 169 aa8.93□□□□□ -0.98
SYNE3-201ENST00000334258 DHRS4-AS1Q9P1J3 65 aa8.92□□□□□ -0.98
SYNE3-201ENST00000334258 COL7A1Q02388 2944 aa8.92□□□□□ -0.98
SYNE3-201ENST00000334258 KRTAP26-1Q6PEX3 210 aa8.92□□□□□ -0.98
SYNE3-201ENST00000334258 CSMD3Q7Z407 3707 aa8.92□□□□□ -0.98
SYNE3-201ENST00000334258 K7EQZ3 153 aa8.91□□□□□ -0.98
SYNE3-201ENST00000334258 Q1T7F1 81 aa8.91□□□□□ -0.98
SYNE3-201ENST00000334258 H3BS24 57 aa8.9□□□□□ -0.98
SYNE3-201ENST00000334258 Q8NBF4 154 aa8.9□□□□□ -0.98
SYNE3-201ENST00000334258 Q6ZRX8 168 aa8.9□□□□□ -0.98
SYNE3-201ENST00000334258 UBE2BP63146 152 aa8.9□□□□□ -0.99
SYNE3-201ENST00000334258 Q9BRP9 147 aa8.88□□□□□ -0.99
SYNE3-201ENST00000334258 LINC00588Q9Y4M8 146 aa8.88□□□□□ -0.99
SYNE3-201ENST00000334258 FAM168BA1KXE4 195 aa8.88□□□□□ -0.99
SYNE3-201ENST00000334258 DSCR10P59022 87 aa8.88□□□□□ -0.99
SYNE3-201ENST00000334258 DEFB116Q30KQ4 102 aa8.88□□□□□ -0.99
SYNE3-201ENST00000334258 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.87□□□□□ -0.99
SYNE3-201ENST00000334258 LYSTQ99698 3801 aa8.87□□□□□ -0.99
SYNE3-201ENST00000334258 A0A1B0GW54 56 aa8.86□□□□□ -0.99
SYNE3-201ENST00000334258 A0A0G2JQZ4 141 aa8.86□□□□□ -0.99
SYNE3-201ENST00000334258 A0A1W2PNN7 141 aa8.86□□□□□ -0.99
SYNE3-201ENST00000334258 WFDC13Q8IUB5 93 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms