RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 DEFB131BA0A096LNP1 70 aa8.07□□□□□ -1.12
VPS33B-201ENST00000333371 SERTAD4-AS1Q5TG53 156 aa8.07□□□□□ -1.12
VPS33B-201ENST00000333371 RPS28P62857 69 aaKnown RBP8.06□□□□□ -1.12
VPS33B-201ENST00000333371 PRB2P02812 416 aaPredicted RBP8.06□□□□□ -1.12
VPS33B-201ENST00000333371 PDE6GP18545 87 aa8.06□□□□□ -1.12
VPS33B-201ENST00000333371 RMI2Q96E14 147 aa8.05□□□□□ -1.12
VPS33B-201ENST00000333371 TM2D3Q9BRN9 247 aa8.05□□□□□ -1.12
VPS33B-201ENST00000333371 TRAV7A0A075B6U4 112 aa8.05□□□□□ -1.12
VPS33B-201ENST00000333371 CXCL6P80162 114 aa8.05□□□□□ -1.12
VPS33B-201ENST00000333371 NBEAL1Q6ZS30 2694 aa8.04□□□□□ -1.12
VPS33B-201ENST00000333371 TRBV7-6A0A0J9YX20 115 aa8.04□□□□□ -1.12
VPS33B-201ENST00000333371 C3orf84H3BNL1 204 aa8.04□□□□□ -1.12
VPS33B-201ENST00000333371 RPL37AP8A6NKH3 93 aa8.04□□□□□ -1.12
VPS33B-201ENST00000333371 SYCNQ0VAF6 134 aa8.04□□□□□ -1.12
VPS33B-201ENST00000333371 FAM168BA1KXE4 195 aa8.03□□□□□ -1.12
VPS33B-201ENST00000333371 CASC10Q5T4H9 136 aa8.03□□□□□ -1.12
VPS33B-201ENST00000333371 H7BZZ5 65 aa8.03□□□□□ -1.12
VPS33B-201ENST00000333371 MRAPQ8TCY5 172 aa8.03□□□□□ -1.12
VPS33B-201ENST00000333371 C7orf33Q8WU49 177 aa8.03□□□□□ -1.12
VPS33B-201ENST00000333371 LYSTQ99698 3801 aa8.02□□□□□ -1.13
VPS33B-201ENST00000333371 H3BQ85 93 aa8.02□□□□□ -1.13
VPS33B-201ENST00000333371 BPY2O14599 106 aa8.01□□□□□ -1.13
VPS33B-201ENST00000333371 NKAPP1Q8N9T2 125 aa8.01□□□□□ -1.13
VPS33B-201ENST00000333371 LINC01556Q5JQF7 62 aa8.01□□□□□ -1.13
VPS33B-201ENST00000333371 C4orf26Q17RF5 130 aa8□□□□□ -1.13
VPS33B-201ENST00000333371 DNAH10Q8IVF4 4471 aa8□□□□□ -1.13
VPS33B-201ENST00000333371 FAM236DA0A1B0GTK5 79 aa8□□□□□ -1.13
VPS33B-201ENST00000333371 FAM236CP0DP71 79 aa8□□□□□ -1.13
VPS33B-201ENST00000333371 Q8N377 158 aa8□□□□□ -1.13
VPS33B-201ENST00000333371 DNAH1Q9P2D7 4330 aa8□□□□□ -1.13
VPS33B-201ENST00000333371 DNAH3Q8TD57 4116 aa7.98□□□□□ -1.13
VPS33B-201ENST00000333371 F8WEM9 126 aa7.98□□□□□ -1.13
VPS33B-201ENST00000333371 KCNQ1DNQ9H478 68 aa7.98□□□□□ -1.13
VPS33B-201ENST00000333371 CSMD3Q7Z407 3707 aa7.98□□□□□ -1.13
VPS33B-201ENST00000333371 K7EIL1 84 aa7.98□□□□□ -1.13
VPS33B-201ENST00000333371 ST20-AS1Q8NBB2 130 aa7.98□□□□□ -1.13
VPS33B-201ENST00000333371 KLKP1Q107X0 134 aa7.97□□□□□ -1.13
VPS33B-201ENST00000333371 Q5XG85 94 aa7.97□□□□□ -1.13
VPS33B-201ENST00000333371 IGKV4-1P06312 121 aa7.97□□□□□ -1.13
VPS33B-201ENST00000333371 NREPQ16612 68 aa7.97□□□□□ -1.13
VPS33B-201ENST00000333371 Q9BRP9 147 aa7.97□□□□□ -1.13
VPS33B-201ENST00000333371 KRTAP7-1Q8IUC3 87 aa7.96□□□□□ -1.13
VPS33B-201ENST00000333371 HRCT1Q6UXD1 115 aa7.96□□□□□ -1.14
VPS33B-201ENST00000333371 BCE1O60756 84 aa7.95□□□□□ -1.14
VPS33B-201ENST00000333371 SRRM2Q9UQ35 2752 aaKnown RBP7.95□□□□□ -1.14
VPS33B-201ENST00000333371 MGAM2Q2M2H8 2515 aa7.94□□□□□ -1.14
VPS33B-201ENST00000333371 LINC00588Q9Y4M8 146 aa7.94□□□□□ -1.14
VPS33B-201ENST00000333371 HUWE1Q7Z6Z7 4374 aaKnown RBP7.94□□□□□ -1.14
VPS33B-201ENST00000333371 DNAH10OSP0CZ25 163 aa7.93□□□□□ -1.14
VPS33B-201ENST00000333371 ERC2-IT1O76042 136 aa7.93□□□□□ -1.14
VPS33B-201ENST00000333371 Q6ZRX8 168 aa7.93□□□□□ -1.14
VPS33B-201ENST00000333371 A0A1W2PNM2 257 aa7.92□□□□□ -1.14
VPS33B-201ENST00000333371 A0A0G2JQZ4 141 aa7.92□□□□□ -1.14
VPS33B-201ENST00000333371 A0A1W2PNN7 141 aa7.92□□□□□ -1.14
VPS33B-201ENST00000333371 KRTAP4-16G5E9R7 235 aaPredicted RBP7.92□□□□□ -1.14
VPS33B-201ENST00000333371 IGLV1-50A0A075B6I6 118 aa7.91□□□□□ -1.14
VPS33B-201ENST00000333371 IGLV5-48A0A075B6I7 105 aa7.91□□□□□ -1.14
VPS33B-201ENST00000333371 ETDCA0A1B0GVM5 59 aa7.91□□□□□ -1.14
VPS33B-201ENST00000333371 TENM2Q9NT68 2774 aa7.91□□□□□ -1.14
VPS33B-201ENST00000333371 DNAH9Q9NYC9 4486 aa7.9□□□□□ -1.14
VPS33B-201ENST00000333371 TMEM254Q8TBM7 123 aa7.9□□□□□ -1.14
VPS33B-201ENST00000333371 STAB2Q8WWQ8 2551 aa7.9□□□□□ -1.15
VPS33B-201ENST00000333371 COL7A1Q02388 2944 aa7.89□□□□□ -1.15
VPS33B-201ENST00000333371 C1orf137Q5JT78 98 aa7.89□□□□□ -1.15
VPS33B-201ENST00000333371 TLX1NBP0CAT3 122 aa7.88□□□□□ -1.15
VPS33B-201ENST00000333371 OCR1Q9BZK8 76 aa7.88□□□□□ -1.15
VPS33B-201ENST00000333371 SERP1Q9Y6X1 66 aa7.88□□□□□ -1.15
VPS33B-201ENST00000333371 DHRS4-AS1Q9P1J3 65 aa7.88□□□□□ -1.15
VPS33B-201ENST00000333371 F8WDY8 70 aa7.87□□□□□ -1.15
VPS33B-201ENST00000333371 UBE2BP63146 152 aa7.87□□□□□ -1.15
VPS33B-201ENST00000333371 EPM2AB3EWF7 344 aa7.87□□□□□ -1.15
VPS33B-201ENST00000333371 SPRR1AP35321 89 aa7.87□□□□□ -1.15
VPS33B-201ENST00000333371 FUSP35637 526 aaKnown RBP eCLIP7.87□□□□□ -1.15
VPS33B-201ENST00000333371 TNP2Q05952 138 aa7.87□□□□□ -1.15
VPS33B-201ENST00000333371 SMIM29Q86T20 159 aa7.87□□□□□ -1.15
VPS33B-201ENST00000333371 FAM30AQ9NZY2 134 aa7.87□□□□□ -1.15
VPS33B-201ENST00000333371 PRYO14603 147 aa7.86□□□□□ -1.15
VPS33B-201ENST00000333371 MRPL55Q7Z7F7 128 aaKnown RBP7.86□□□□□ -1.15
VPS33B-201ENST00000333371 HIGD2AQ9BW72 106 aa7.86□□□□□ -1.15
VPS33B-201ENST00000333371 PLA2G2DQ9UNK4 145 aa7.85□□□□□ -1.15
VPS33B-201ENST00000333371 MDFIQ99750 246 aa7.85□□□□□ -1.15
VPS33B-201ENST00000333371 LINC00474Q9P2X8 69 aa7.85□□□□□ -1.15
VPS33B-201ENST00000333371 PRO0628Q9UI54 55 aa7.84□□□□□ -1.15
VPS33B-201ENST00000333371 FP248Q71RG6 208 aaPredicted RBP7.84□□□□□ -1.15
VPS33B-201ENST00000333371 IGLV5-37A0A075B6J1 123 aa7.83□□□□□ -1.16
VPS33B-201ENST00000333371 IGKV2-24A0A0C4DH68 120 aa7.83□□□□□ -1.16
VPS33B-201ENST00000333371 Q8NBF4 154 aa7.83□□□□□ -1.16
VPS33B-201ENST00000333371 DEFB116Q30KQ4 102 aa7.82□□□□□ -1.16
VPS33B-201ENST00000333371 A0A0U1RQV1 116 aa7.82□□□□□ -1.16
VPS33B-201ENST00000333371 PRLHP81277 87 aa7.82□□□□□ -1.16
VPS33B-201ENST00000333371 DNAH7Q8WXX0 4024 aa7.82□□□□□ -1.16
VPS33B-201ENST00000333371 K7EQZ3 153 aa7.82□□□□□ -1.16
VPS33B-201ENST00000333371 DSCR10P59022 87 aa7.82□□□□□ -1.16
VPS33B-201ENST00000333371 FAM229BQ4G0N7 80 aa7.81□□□□□ -1.16
VPS33B-201ENST00000333371 NDUFC1O43677 76 aa7.81□□□□□ -1.16
VPS33B-201ENST00000333371 REG3GQ6UW15 175 aa7.81□□□□□ -1.16
VPS33B-201ENST00000333371 KRTAP1-5Q9BYS1 174 aa7.81□□□□□ -1.16
VPS33B-201ENST00000333371 A0A096LNI7 61 aa7.8□□□□□ -1.16
VPS33B-201ENST00000333371 LINC00476Q8WZB0 136 aa7.8□□□□□ -1.16
VPS33B-201ENST00000333371 LINC00336Q6ZUF6 198 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms