RNA–Protein interactions for RNA: ENST00000333007.5

TNFAIP2-201, Transcript of TNF alpha induced protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP2, Length 4,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-201ENST00000333007 NDUFB1O75438 58 aa12.23□□□□□ -0.45
TNFAIP2-201ENST00000333007 C1orf137Q5JT78 98 aa12.23□□□□□ -0.45
TNFAIP2-201ENST00000333007 MXRA5Q9NR99 2828 aa12.23□□□□□ -0.45
TNFAIP2-201ENST00000333007 TM2D3Q9BRN9 247 aa12.22□□□□□ -0.45
TNFAIP2-201ENST00000333007 TRBV7-6A0A0J9YX20 115 aa12.22□□□□□ -0.45
TNFAIP2-201ENST00000333007 IGLV6-57P01721 117 aa12.22□□□□□ -0.45
TNFAIP2-201ENST00000333007 ELOF1P60002 83 aaKnown RBP12.2□□□□□ -0.46
TNFAIP2-201ENST00000333007 C7orf33Q8WU49 177 aa12.2□□□□□ -0.46
TNFAIP2-201ENST00000333007 PRYO14603 147 aa12.19□□□□□ -0.46
TNFAIP2-201ENST00000333007 BAHCC1Q9P281 2608 aa12.19□□□□□ -0.46
TNFAIP2-201ENST00000333007 APCP25054 2843 aa12.18□□□□□ -0.46
TNFAIP2-201ENST00000333007 C1orf195Q5TG92 126 aa12.18□□□□□ -0.46
TNFAIP2-201ENST00000333007 LINC00208Q96KT6 92 aa12.18□□□□□ -0.46
TNFAIP2-201ENST00000333007 LOC110117498A0A087WWA1 95 aa12.17□□□□□ -0.46
TNFAIP2-201ENST00000333007 CXCL6P80162 114 aa12.17□□□□□ -0.46
TNFAIP2-201ENST00000333007 VPREB1P12018 145 aa12.17□□□□□ -0.46
TNFAIP2-201ENST00000333007 PRR34Q9NV39 138 aa12.17□□□□□ -0.46
TNFAIP2-201ENST00000333007 IGKV4-1P06312 121 aa12.16□□□□□ -0.46
TNFAIP2-201ENST00000333007 LINC01556Q5JQF7 62 aa12.15□□□□□ -0.46
TNFAIP2-201ENST00000333007 Q6ZRP5 223 aa12.15□□□□□ -0.46
TNFAIP2-201ENST00000333007 V9GYY9 64 aa12.15□□□□□ -0.46
TNFAIP2-201ENST00000333007 RPS28P62857 69 aaKnown RBP12.15□□□□□ -0.46
TNFAIP2-201ENST00000333007 GVQW2A0A096LPI5 108 aaPredicted RBP12.14□□□□□ -0.47
TNFAIP2-201ENST00000333007 SPENQ96T58 3664 aaKnown RBP12.14□□□□□ -0.47
TNFAIP2-201ENST00000333007 CUBNO60494 3623 aa12.13□□□□□ -0.47
TNFAIP2-201ENST00000333007 M0R2N4 97 aa12.13□□□□□ -0.47
TNFAIP2-201ENST00000333007 MRPL55Q7Z7F7 128 aaKnown RBP12.12□□□□□ -0.47
TNFAIP2-201ENST00000333007 ATP5EP56381 51 aaPredicted RBP12.11□□□□□ -0.47
TNFAIP2-201ENST00000333007 C22orf24Q9Y442 160 aa12.11□□□□□ -0.47
TNFAIP2-201ENST00000333007 A0A087WSZ3 146 aa12.1□□□□□ -0.47
TNFAIP2-201ENST00000333007 SMIM29Q86T20 159 aa12.1□□□□□ -0.47
TNFAIP2-201ENST00000333007 OBSCN-AS1Q96MR7 158 aa12.1□□□□□ -0.47
TNFAIP2-201ENST00000333007 REG3GQ6UW15 175 aa12.09□□□□□ -0.47
TNFAIP2-201ENST00000333007 LINC00167Q96N53 147 aa12.09□□□□□ -0.47
TNFAIP2-201ENST00000333007 LINC00474Q9P2X8 69 aa12.09□□□□□ -0.47
TNFAIP2-201ENST00000333007 CHKB-CPT1BH3BT56 60 aa12.09□□□□□ -0.47
TNFAIP2-201ENST00000333007 KRTAP24-1Q3LI83 254 aa12.09□□□□□ -0.47
TNFAIP2-201ENST00000333007 Q8NDZ9 215 aa12.08□□□□□ -0.47
TNFAIP2-201ENST00000333007 PRLHP81277 87 aa12.08□□□□□ -0.48
TNFAIP2-201ENST00000333007 H3BNG1 76 aa12.08□□□□□ -0.48
TNFAIP2-201ENST00000333007 B9D2Q9BPU9 175 aa12.08□□□□□ -0.48
TNFAIP2-201ENST00000333007 SPINK6Q6UWN8 80 aa12.07□□□□□ -0.48
TNFAIP2-201ENST00000333007 C14orf177Q52M58 125 aa12.07□□□□□ -0.48
TNFAIP2-201ENST00000333007 A6NED7 52 aa12.05□□□□□ -0.48
TNFAIP2-201ENST00000333007 ST20-AS1Q8NBB2 130 aa12.05□□□□□ -0.48
TNFAIP2-201ENST00000333007 CYSTM1Q9H1C7 97 aa12.05□□□□□ -0.48
TNFAIP2-201ENST00000333007 SERTAD4-AS1Q5TG53 156 aa12.05□□□□□ -0.48
TNFAIP2-201ENST00000333007 C15orf56Q8N910 161 aa12.05□□□□□ -0.48
TNFAIP2-201ENST00000333007 F8WDY8 70 aa12.04□□□□□ -0.48
TNFAIP2-201ENST00000333007 LINC00528Q8N1L1 170 aa12.04□□□□□ -0.48
TNFAIP2-201ENST00000333007 FAM168BA1KXE4 195 aa12.04□□□□□ -0.48
TNFAIP2-201ENST00000333007 PRO0628Q9UI54 55 aa12.03□□□□□ -0.48
TNFAIP2-201ENST00000333007 IGLV9-49A0A0B4J1Y8 123 aa12.03□□□□□ -0.48
TNFAIP2-201ENST00000333007 PCOTHQ58A44 107 aa12.01□□□□□ -0.49
TNFAIP2-201ENST00000333007 KRTAP10-11P60412 298 aa12.01□□□□□ -0.49
TNFAIP2-201ENST00000333007 PMAIP1Q13794 54 aa12.01□□□□□ -0.49
TNFAIP2-201ENST00000333007 Q6ZRX8 168 aa12□□□□□ -0.49
TNFAIP2-201ENST00000333007 LINC00588Q9Y4M8 146 aa12□□□□□ -0.49
TNFAIP2-201ENST00000333007 LINC00336Q6ZUF6 198 aa12□□□□□ -0.49
TNFAIP2-201ENST00000333007 NSD1Q96L73 2696 aaPredicted RBP11.99□□□□□ -0.49
TNFAIP2-201ENST00000333007 TRBV7-4A0A0J9YYF1 115 aa11.98□□□□□ -0.49
TNFAIP2-201ENST00000333007 BCE1O60756 84 aa11.98□□□□□ -0.49
TNFAIP2-201ENST00000333007 HIVEP1P15822 2718 aa11.98□□□□□ -0.49
TNFAIP2-201ENST00000333007 Q9BRP9 147 aa11.97□□□□□ -0.49
TNFAIP2-201ENST00000333007 PRR15LQ9BU68 103 aa11.96□□□□□ -0.5
TNFAIP2-201ENST00000333007 A0A0G2JQZ4 141 aa11.95□□□□□ -0.5
TNFAIP2-201ENST00000333007 A0A1W2PNN7 141 aa11.95□□□□□ -0.5
TNFAIP2-201ENST00000333007 H7BZZ5 65 aa11.95□□□□□ -0.5
TNFAIP2-201ENST00000333007 Q8NBF4 154 aa11.94□□□□□ -0.5
TNFAIP2-201ENST00000333007 KCNQ1DNQ9H478 68 aa11.93□□□□□ -0.5
TNFAIP2-201ENST00000333007 DNAH10OSP0CZ25 163 aa11.93□□□□□ -0.5
TNFAIP2-201ENST00000333007 Q8N377 158 aa11.92□□□□□ -0.5
TNFAIP2-201ENST00000333007 CASC2Q6XLA1 102 aa11.92□□□□□ -0.5
TNFAIP2-201ENST00000333007 HCG22E2RYF7 251 aa11.91□□□□□ -0.5
TNFAIP2-201ENST00000333007 LINC00476Q8WZB0 136 aa11.9□□□□□ -0.5
TNFAIP2-201ENST00000333007 CASC10Q5T4H9 136 aa11.89□□□□□ -0.51
TNFAIP2-201ENST00000333007 BSNQ9UPA5 3926 aa11.89□□□□□ -0.51
TNFAIP2-201ENST00000333007 H0Y9P7 68 aa11.89□□□□□ -0.51
TNFAIP2-201ENST00000333007 RPL37AP61513 92 aaKnown RBP11.89□□□□□ -0.51
TNFAIP2-201ENST00000333007 IGLV1-50A0A075B6I6 118 aa11.86□□□□□ -0.51
TNFAIP2-201ENST00000333007 KLKP1Q107X0 134 aa11.85□□□□□ -0.51
TNFAIP2-201ENST00000333007 NIPBLQ6KC79 2804 aaeCLIP11.85□□□□□ -0.513e-6■■■■■ 50.1
TNFAIP2-201ENST00000333007 CHTF8P0CG12 524 aa11.85□□□□□ -0.51
TNFAIP2-201ENST00000333007 IGHV6-1A0A0B4J1U7 121 aa11.84□□□□□ -0.51
TNFAIP2-201ENST00000333007 C4orf48Q5BLP8 95 aa11.83□□□□□ -0.52
TNFAIP2-201ENST00000333007 PHF5AQ7RTV0 110 aaKnown RBP11.83□□□□□ -0.52
TNFAIP2-201ENST00000333007 K7EQZ3 153 aa11.82□□□□□ -0.52
TNFAIP2-201ENST00000333007 LY6G6CO95867 125 aa11.82□□□□□ -0.52
TNFAIP2-201ENST00000333007 ERC2-IT1O76042 136 aa11.81□□□□□ -0.52
TNFAIP2-201ENST00000333007 C1orf64Q8NEQ6 169 aa11.8□□□□□ -0.52
TNFAIP2-201ENST00000333007 RETNLBQ9BQ08 111 aa11.79□□□□□ -0.52
TNFAIP2-201ENST00000333007 A0A1W2PNM2 257 aa11.78□□□□□ -0.52
TNFAIP2-201ENST00000333007 A0A1B0GW54 56 aa11.77□□□□□ -0.53
TNFAIP2-201ENST00000333007 C16orf90A8MZG2 172 aa11.75□□□□□ -0.53
TNFAIP2-201ENST00000333007 A8MUN3 132 aa11.75□□□□□ -0.53
TNFAIP2-201ENST00000333007 EPM2AB3EWF7 344 aa11.75□□□□□ -0.53
TNFAIP2-201ENST00000333007 TLX1NBP0CAT3 122 aa11.72□□□□□ -0.53
TNFAIP2-201ENST00000333007 K7EIL1 84 aa11.71□□□□□ -0.53
TNFAIP2-201ENST00000333007 OXTP01178 125 aa11.71□□□□□ -0.53
TNFAIP2-201ENST00000333007 IGFL1Q6UW32 110 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms