RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 DSCR8Q96T75 97 aa11.34□□□□□ -0.59
DDX28-201ENST00000332395 GHRHP01286 108 aa11.33□□□□□ -0.6
DDX28-201ENST00000332395 MDFIQ99750 246 aa11.33□□□□□ -0.6
DDX28-201ENST00000332395 LAMTOR3Q9UHA4 124 aa11.33□□□□□ -0.6
DDX28-201ENST00000332395 H3BQ85 93 aa11.33□□□□□ -0.6
DDX28-201ENST00000332395 SERTAD4-AS1Q5TG53 156 aa11.33□□□□□ -0.6
DDX28-201ENST00000332395 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.33□□□□□ -0.6
DDX28-201ENST00000332395 DNAH9Q9NYC9 4486 aa11.32□□□□□ -0.6
DDX28-201ENST00000332395 RBM3P98179 157 aaKnown RBP11.32□□□□□ -0.6
DDX28-201ENST00000332395 NKAPP1Q8N9T2 125 aa11.32□□□□□ -0.6
DDX28-201ENST00000332395 COL7A1Q02388 2944 aa11.32□□□□□ -0.6
DDX28-201ENST00000332395 FAM19A1Q7Z5A9 133 aa11.31□□□□□ -0.6
DDX28-201ENST00000332395 LINC00528Q8N1L1 170 aa11.3□□□□□ -0.6
DDX28-201ENST00000332395 STAB2Q8WWQ8 2551 aa11.29□□□□□ -0.6
DDX28-201ENST00000332395 C7orf33Q8WU49 177 aa11.29□□□□□ -0.6
DDX28-201ENST00000332395 UBL5Q9BZL1 73 aa11.28□□□□□ -0.6
DDX28-201ENST00000332395 PLA2G2DQ9UNK4 145 aa11.28□□□□□ -0.6
DDX28-201ENST00000332395 Q6ZQT0 140 aa11.28□□□□□ -0.6
DDX28-201ENST00000332395 KCNQ1DNQ9H478 68 aa11.28□□□□□ -0.6
DDX28-201ENST00000332395 LOC110117498A0A087WWA1 95 aa11.27□□□□□ -0.6
DDX28-201ENST00000332395 LYSTQ99698 3801 aa11.27□□□□□ -0.61
DDX28-201ENST00000332395 KRTAP1-5Q9BYS1 174 aa11.26□□□□□ -0.61
DDX28-201ENST00000332395 FAM168BA1KXE4 195 aa11.25□□□□□ -0.61
DDX28-201ENST00000332395 B9D2Q9BPU9 175 aa11.25□□□□□ -0.61
DDX28-201ENST00000332395 Q5XG85 94 aa11.24□□□□□ -0.61
DDX28-201ENST00000332395 APLNQ9ULZ1 77 aa11.24□□□□□ -0.61
DDX28-201ENST00000332395 IGLV5-37A0A075B6J1 123 aa11.23□□□□□ -0.61
DDX28-201ENST00000332395 BCE1O60756 84 aa11.23□□□□□ -0.61
DDX28-201ENST00000332395 UBE2DNLQ8IWF7 75 aa11.23□□□□□ -0.61
DDX28-201ENST00000332395 PDE6GP18545 87 aa11.21□□□□□ -0.61
DDX28-201ENST00000332395 C4orf26Q17RF5 130 aa11.21□□□□□ -0.61
DDX28-201ENST00000332395 KRTAP7-1Q8IUC3 87 aa11.21□□□□□ -0.61
DDX28-201ENST00000332395 C20orf197Q8N268 126 aa11.21□□□□□ -0.61
DDX28-201ENST00000332395 DYNC2H1Q8NCM8 4307 aaKnown RBP11.21□□□□□ -0.62
DDX28-201ENST00000332395 RPL37AP8A6NKH3 93 aa11.21□□□□□ -0.62
DDX28-201ENST00000332395 DNAH10Q8IVF4 4471 aa11.2□□□□□ -0.62
DDX28-201ENST00000332395 M0R2N4 97 aa11.2□□□□□ -0.62
DDX28-201ENST00000332395 IGLV1-50A0A075B6I6 118 aa11.19□□□□□ -0.62
DDX28-201ENST00000332395 TRBV7-4A0A0J9YYF1 115 aa11.18□□□□□ -0.62
DDX28-201ENST00000332395 TRAV7A0A075B6U4 112 aa11.18□□□□□ -0.62
DDX28-201ENST00000332395 FAM236DA0A1B0GTK5 79 aa11.18□□□□□ -0.62
DDX28-201ENST00000332395 PRYO14603 147 aa11.18□□□□□ -0.62
DDX28-201ENST00000332395 FAM236CP0DP71 79 aa11.18□□□□□ -0.62
DDX28-201ENST00000332395 PSCAO43653 123 aa11.17□□□□□ -0.62
DDX28-201ENST00000332395 KRTAP4-16G5E9R7 235 aaPredicted RBP11.16□□□□□ -0.62
DDX28-201ENST00000332395 LINC01547P58512 204 aaPredicted RBP11.16□□□□□ -0.62
DDX28-201ENST00000332395 HRCT1Q6UXD1 115 aa11.16□□□□□ -0.62
DDX28-201ENST00000332395 Q6ZRX8 168 aa11.16□□□□□ -0.62
DDX28-201ENST00000332395 MRPL55Q7Z7F7 128 aaKnown RBP11.16□□□□□ -0.62
DDX28-201ENST00000332395 SPRR1AP35321 89 aa11.16□□□□□ -0.62
DDX28-201ENST00000332395 EPM2AB3EWF7 344 aa11.15□□□□□ -0.62
DDX28-201ENST00000332395 H7BZZ5 65 aa11.15□□□□□ -0.62
DDX28-201ENST00000332395 CSMD3Q7Z407 3707 aa11.15□□□□□ -0.63
DDX28-201ENST00000332395 Q6ZVQ6 151 aa11.14□□□□□ -0.63
DDX28-201ENST00000332395 CNBPP62633 177 aaKnown RBP11.14□□□□□ -0.63
DDX28-201ENST00000332395 DHRS4-AS1Q9P1J3 65 aa11.14□□□□□ -0.63
DDX28-201ENST00000332395 ETDCA0A1B0GVM5 59 aa11.13□□□□□ -0.63
DDX28-201ENST00000332395 Q9BRP9 147 aa11.13□□□□□ -0.63
DDX28-201ENST00000332395 HAMPP81172 84 aa11.12□□□□□ -0.63
DDX28-201ENST00000332395 KLKP1Q107X0 134 aa11.12□□□□□ -0.63
DDX28-201ENST00000332395 SERP1Q9Y6X1 66 aa11.12□□□□□ -0.63
DDX28-201ENST00000332395 DEFB105AQ8NG35 78 aa11.11□□□□□ -0.63
DDX28-201ENST00000332395 DNAH7Q8WXX0 4024 aa11.11□□□□□ -0.63
DDX28-201ENST00000332395 A0A096LNI7 61 aa11.11□□□□□ -0.63
DDX28-201ENST00000332395 CXCL6P80162 114 aa11.11□□□□□ -0.63
DDX28-201ENST00000332395 Q8N377 158 aa11.1□□□□□ -0.63
DDX28-201ENST00000332395 NUPR2A6NF83 97 aa11.1□□□□□ -0.63
DDX28-201ENST00000332395 C16orf90A8MZG2 172 aa11.1□□□□□ -0.63
DDX28-201ENST00000332395 PLECQ15149 4684 aaKnown RBP11.1□□□□□ -0.63
DDX28-201ENST00000332395 IGKV2-24A0A0C4DH68 120 aa11.09□□□□□ -0.63
DDX28-201ENST00000332395 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.08□□□□□ -0.64
DDX28-201ENST00000332395 C14orf177Q52M58 125 aa11.08□□□□□ -0.64
DDX28-201ENST00000332395 TENM2Q9NT68 2774 aa11.07□□□□□ -0.64
DDX28-201ENST00000332395 REG3GQ6UW15 175 aa11.06□□□□□ -0.64
DDX28-201ENST00000332395 NBDYA0A0U1RRE5 68 aa11.05□□□□□ -0.64
DDX28-201ENST00000332395 A0A1W2PNN7 141 aa11.04□□□□□ -0.64
DDX28-201ENST00000332395 SNURFQ9Y675 71 aa11.04□□□□□ -0.64
DDX28-201ENST00000332395 ST20-AS1Q8NBB2 130 aa11.04□□□□□ -0.64
DDX28-201ENST00000332395 IGLV5-48A0A075B6I7 105 aa11.03□□□□□ -0.64
DDX28-201ENST00000332395 UBE2BP63146 152 aa11.03□□□□□ -0.64
DDX28-201ENST00000332395 ERC2-IT1O76042 136 aa11.03□□□□□ -0.64
DDX28-201ENST00000332395 F8WEM9 126 aa11.01□□□□□ -0.65
DDX28-201ENST00000332395 LRCOL1A6NCL2 159 aa11.01□□□□□ -0.65
DDX28-201ENST00000332395 PRKDCP78527 4128 aaKnown RBP11□□□□□ -0.65
DDX28-201ENST00000332395 NDUFC1O43677 76 aa10.99□□□□□ -0.65
DDX28-201ENST00000332395 CHTF8P0CG12 524 aa10.99□□□□□ -0.65
DDX28-201ENST00000332395 TNP2Q05952 138 aa10.98□□□□□ -0.65
DDX28-201ENST00000332395 Q6ZRN7 208 aaPredicted RBP10.98□□□□□ -0.65
DDX28-201ENST00000332395 SCXQ7RTU7 201 aa10.98□□□□□ -0.65
DDX28-201ENST00000332395 C9orf163Q8N9P6 203 aa10.98□□□□□ -0.65
DDX28-201ENST00000332395 STARD9Q9P2P6 4700 aa10.97□□□□□ -0.65
DDX28-201ENST00000332395 SMIM26A0A096LP01 95 aa10.97□□□□□ -0.65
DDX28-201ENST00000332395 PRLHP81277 87 aa10.95□□□□□ -0.66
DDX28-201ENST00000332395 VPS13DQ5THJ4 4388 aa10.95□□□□□ -0.66
DDX28-201ENST00000332395 C3orf84H3BNL1 204 aa10.94□□□□□ -0.66
DDX28-201ENST00000332395 FP248Q71RG6 208 aaPredicted RBP10.94□□□□□ -0.66
DDX28-201ENST00000332395 ATP5EP56381 51 aaPredicted RBP10.94□□□□□ -0.66
DDX28-201ENST00000332395 NREPQ16612 68 aa10.94□□□□□ -0.66
DDX28-201ENST00000332395 C1orf137Q5JT78 98 aa10.94□□□□□ -0.66
DDX28-201ENST00000332395 PHF5AQ7RTV0 110 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms