RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 TSPAN13O95857 204 aa16.2■□□□□ 0.18
ATPAF1-201ENST00000329231 SPANXDQ9BXN6 97 aa16.19■□□□□ 0.18
ATPAF1-201ENST00000329231 SPANXCQ9NY87 97 aa16.19■□□□□ 0.18
ATPAF1-201ENST00000329231 ZNF706Q9Y5V0 76 aaPredicted RBP16.19■□□□□ 0.18
ATPAF1-201ENST00000329231 S100A7L2Q5SY68 101 aa16.18■□□□□ 0.18
ATPAF1-201ENST00000329231 IGLV6-57P01721 117 aa16.17■□□□□ 0.18
ATPAF1-201ENST00000329231 SPRR4Q96PI1 79 aa16.17■□□□□ 0.18
ATPAF1-201ENST00000329231 PRR4Q16378 134 aa16.15■□□□□ 0.18
ATPAF1-201ENST00000329231 Q6ZVH6 145 aa16.14■□□□□ 0.17
ATPAF1-201ENST00000329231 SMCR5Q8TEV8 140 aa16.14■□□□□ 0.17
ATPAF1-201ENST00000329231 LINC00304Q8N9R0 145 aa16.13■□□□□ 0.17
ATPAF1-201ENST00000329231 COPS9Q8WXC6 57 aa16.13■□□□□ 0.17
ATPAF1-201ENST00000329231 B5MCH6 92 aa16.12■□□□□ 0.17
ATPAF1-201ENST00000329231 IFITM1P13164 125 aa16.12■□□□□ 0.17
ATPAF1-201ENST00000329231 PPDPFQ9H3Y8 114 aa16.11■□□□□ 0.17
ATPAF1-201ENST00000329231 TRAV23DV6A0A075B6W5 121 aa16.09■□□□□ 0.17
ATPAF1-201ENST00000329231 LINC00518Q8N0U6 118 aa16.09■□□□□ 0.17
ATPAF1-201ENST00000329231 C3orf22Q8N5N4 141 aa16.08■□□□□ 0.16
ATPAF1-201ENST00000329231 CBY1Q9Y3M2 126 aa16.08■□□□□ 0.16
ATPAF1-201ENST00000329231 Q6ZRX8 168 aa16.06■□□□□ 0.16
ATPAF1-201ENST00000329231 OR13C6PQ8NH95 151 aa16.06■□□□□ 0.16
ATPAF1-201ENST00000329231 MUSTN1Q8IVN3 82 aa16.05■□□□□ 0.16
ATPAF1-201ENST00000329231 CTAG1AP78358 180 aa16.04■□□□□ 0.16
ATPAF1-201ENST00000329231 ZNF73O43830 326 aaPredicted RBP16.03■□□□□ 0.16
ATPAF1-201ENST00000329231 JOSD1Q15040 202 aaPredicted RBP16.03■□□□□ 0.16
ATPAF1-201ENST00000329231 Q9BRP9 147 aa16.02■□□□□ 0.16
ATPAF1-201ENST00000329231 LPAP08519 4548 aa16.02■□□□□ 0.15
ATPAF1-201ENST00000329231 LINC00483Q53H64 154 aa16.01■□□□□ 0.15
ATPAF1-201ENST00000329231 ERC2-IT1O76042 136 aa16■□□□□ 0.15
ATPAF1-201ENST00000329231 COX8AP10176 69 aa16■□□□□ 0.15
ATPAF1-201ENST00000329231 GAGE2AQ6NT46 116 aa16■□□□□ 0.15
ATPAF1-201ENST00000329231 TMA7Q9Y2S6 64 aaKnown RBP16■□□□□ 0.15
ATPAF1-201ENST00000329231 HINT1P49773 126 aaPredicted RBP15.99■□□□□ 0.15
ATPAF1-201ENST00000329231 SPAG11AQ6PDA7 123 aa15.98■□□□□ 0.15
ATPAF1-201ENST00000329231 DLEU1O43261 78 aa15.95■□□□□ 0.14
ATPAF1-201ENST00000329231 VAMP8Q9BV40 100 aa15.95■□□□□ 0.14
ATPAF1-201ENST00000329231 PAM16Q9Y3D7 125 aa15.95■□□□□ 0.14
ATPAF1-201ENST00000329231 SPATA45Q537H7 98 aa15.94■□□□□ 0.14
ATPAF1-201ENST00000329231 C4orf48Q5BLP8 95 aa15.94■□□□□ 0.14
ATPAF1-201ENST00000329231 RETNLBQ9BQ08 111 aa15.92■□□□□ 0.14
ATPAF1-201ENST00000329231 A6NDN8 102 aa15.91■□□□□ 0.14
ATPAF1-201ENST00000329231 Q8NBF4 154 aa15.91■□□□□ 0.14
ATPAF1-201ENST00000329231 C14orf144Q96I85 54 aa15.9■□□□□ 0.14
ATPAF1-201ENST00000329231 TRAV13-2A0A0B4J235 113 aa15.89■□□□□ 0.13
ATPAF1-201ENST00000329231 C6orf99Q4VX62 202 aa15.87■□□□□ 0.13
ATPAF1-201ENST00000329231 IGLV9-49A0A0B4J1Y8 123 aa15.86■□□□□ 0.13
ATPAF1-201ENST00000329231 PYY3Q5JQD4 70 aa15.86■□□□□ 0.13
ATPAF1-201ENST00000329231 HIST1H4GQ99525 98 aa15.86■□□□□ 0.13
ATPAF1-201ENST00000329231 RNF213Q63HN8 5207 aa15.86■□□□□ 0.13
ATPAF1-201ENST00000329231 A4D1N5 150 aa15.85■□□□□ 0.13
ATPAF1-201ENST00000329231 MOBPQ13875 183 aa15.85■□□□□ 0.13
ATPAF1-201ENST00000329231 COX7BP24311 80 aa15.84■□□□□ 0.13
ATPAF1-201ENST00000329231 ELOF1P60002 83 aaKnown RBP15.84■□□□□ 0.13
ATPAF1-201ENST00000329231 SLC25A34Q6PIV7 304 aa15.84■□□□□ 0.13
ATPAF1-201ENST00000329231 SSBP3-AS1Q7Z2R9 100 aa15.84■□□□□ 0.13
ATPAF1-201ENST00000329231 DHRS4-AS1Q9P1J3 65 aa15.84■□□□□ 0.13
ATPAF1-201ENST00000329231 TRBV7-6A0A0J9YX20 115 aa15.82■□□□□ 0.12
ATPAF1-201ENST00000329231 SPINK1P00995 79 aa15.82■□□□□ 0.12
ATPAF1-201ENST00000329231 ST20-AS1Q8NBB2 130 aa15.82■□□□□ 0.12
ATPAF1-201ENST00000329231 HIGD1BQ9P298 99 aa15.82■□□□□ 0.12
ATPAF1-201ENST00000329231 IGLV7-46A0A075B6I9 117 aa15.8■□□□□ 0.12
ATPAF1-201ENST00000329231 C2orf91Q6ZV80 131 aa15.77■□□□□ 0.12
ATPAF1-201ENST00000329231 SMIM11BQ8TCY0 68 aa15.77■□□□□ 0.12
ATPAF1-201ENST00000329231 A0A1B0GWB2 263 aa15.76■□□□□ 0.11
ATPAF1-201ENST00000329231 TPRXLQ17RH7 258 aa15.75■□□□□ 0.11
ATPAF1-201ENST00000329231 C9orf153Q5TBE3 101 aa15.75■□□□□ 0.11
ATPAF1-201ENST00000329231 SPRR1BP22528 89 aa15.73■□□□□ 0.11
ATPAF1-201ENST00000329231 FP248Q71RG6 208 aaPredicted RBP15.73■□□□□ 0.11
ATPAF1-201ENST00000329231 RPS29P62273 56 aaKnown RBP15.72■□□□□ 0.11
ATPAF1-201ENST00000329231 C12orf57Q99622 126 aa15.72■□□□□ 0.11
ATPAF1-201ENST00000329231 TAL2Q16559 108 aa15.69■□□□□ 0.1
ATPAF1-201ENST00000329231 CDIP1Q9H305 208 aa15.69■□□□□ 0.1
ATPAF1-201ENST00000329231 LAMTOR3Q9UHA4 124 aa15.67■□□□□ 0.1
ATPAF1-201ENST00000329231 VAMP3Q15836 100 aa15.66■□□□□ 0.1
ATPAF1-201ENST00000329231 NHP2Q9NX24 153 aaKnown RBP15.64■□□□□ 0.09
ATPAF1-201ENST00000329231 CFC1BP0CG36 223 aa15.63■□□□□ 0.09
ATPAF1-201ENST00000329231 CFC1P0CG37 223 aa15.63■□□□□ 0.09
ATPAF1-201ENST00000329231 CEND1Q8N111 149 aa15.63■□□□□ 0.09
ATPAF1-201ENST00000329231 Q8N377 158 aa15.62■□□□□ 0.09
ATPAF1-201ENST00000329231 DEFB105AQ8NG35 78 aa15.62■□□□□ 0.09
ATPAF1-201ENST00000329231 TEX49A0A1B0GTD5 131 aa15.61■□□□□ 0.09
ATPAF1-201ENST00000329231 SLC25A20O43772 301 aa15.61■□□□□ 0.09
ATPAF1-201ENST00000329231 RAB37Q96AX2 223 aa15.61■□□□□ 0.09
ATPAF1-201ENST00000329231 A0A0B4J2C4 111 aa15.6■□□□□ 0.09
ATPAF1-201ENST00000329231 TMEM238LA0A1B0GVL6 79 aa15.57■□□□□ 0.08
ATPAF1-201ENST00000329231 A6NJY4 79 aa15.57■□□□□ 0.08
ATPAF1-201ENST00000329231 UQCR10Q9UDW1 63 aa15.57■□□□□ 0.08
ATPAF1-201ENST00000329231 LINC00575Q6W349 94 aa15.56■□□□□ 0.08
ATPAF1-201ENST00000329231 IGLV5-48A0A075B6I7 105 aa15.55■□□□□ 0.08
ATPAF1-201ENST00000329231 H7C2G1 150 aa15.55■□□□□ 0.08
ATPAF1-201ENST00000329231 HSD52Q0P140 79 aa15.55■□□□□ 0.08
ATPAF1-201ENST00000329231 Q1RN00 199 aa15.55■□□□□ 0.08
ATPAF1-201ENST00000329231 BVES-AS1Q5T3Y7 98 aa15.55■□□□□ 0.08
ATPAF1-201ENST00000329231 FXYD2P54710 66 aa15.53■□□□□ 0.08
ATPAF1-201ENST00000329231 LINC01547P58512 204 aaPredicted RBP15.53■□□□□ 0.08
ATPAF1-201ENST00000329231 KRTAP13-3Q3SY46 172 aa15.52■□□□□ 0.08
ATPAF1-201ENST00000329231 hADV29S1A0JD25 119 aa15.5■□□□□ 0.07
ATPAF1-201ENST00000329231 LIMD2Q9BT23 127 aa15.49■□□□□ 0.07
ATPAF1-201ENST00000329231 PRO1933Q9H354 126 aa15.49■□□□□ 0.07
ATPAF1-201ENST00000329231 PRO1854Q9UHT4 67 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 282.7 ms