RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 Q8N377 158 aa4.53□□□□□ -1.68
CCNC-201ENST00000326298 ZNF706Q9Y5V0 76 aaPredicted RBP4.53□□□□□ -1.68
CCNC-201ENST00000326298 DPM2O94777 84 aa4.53□□□□□ -1.68
CCNC-201ENST00000326298 TTTY13Q9BZ97 58 aa4.53□□□□□ -1.68
CCNC-201ENST00000326298 A0A0J9YXY3 114 aa4.52□□□□□ -1.69
CCNC-201ENST00000326298 IGKCP01834 107 aa4.52□□□□□ -1.69
CCNC-201ENST00000326298 PLNP26678 52 aa4.52□□□□□ -1.69
CCNC-201ENST00000326298 CTAG1AP78358 180 aa4.52□□□□□ -1.69
CCNC-201ENST00000326298 C4orf48Q5BLP8 95 aa4.52□□□□□ -1.69
CCNC-201ENST00000326298 LITAFQ99732 161 aa4.52□□□□□ -1.69
CCNC-201ENST00000326298 TRBV10-2A0A0K0K1G8 114 aa4.52□□□□□ -1.69
CCNC-201ENST00000326298 SPINK1P00995 79 aa4.52□□□□□ -1.69
CCNC-201ENST00000326298 FP248Q71RG6 208 aaPredicted RBP4.52□□□□□ -1.69
CCNC-201ENST00000326298 MAP1LC3CQ9BXW4 147 aa4.52□□□□□ -1.69
CCNC-201ENST00000326298 SPANXB1Q9NS25 103 aaPredicted RBP4.51□□□□□ -1.69
CCNC-201ENST00000326298 LINC00587B1AMM8 73 aa4.5□□□□□ -1.69
CCNC-201ENST00000326298 LGALS3P17931 250 aaKnown RBP4.5□□□□□ -1.69
CCNC-201ENST00000326298 ASB16-AS1Q495Z4 193 aa4.5□□□□□ -1.69
CCNC-201ENST00000326298 TRAV23DV6A0A075B6W5 121 aa4.5□□□□□ -1.69
CCNC-201ENST00000326298 ZNF73O43830 326 aaPredicted RBP4.5□□□□□ -1.69
CCNC-201ENST00000326298 NDUFC2O95298 119 aa4.5□□□□□ -1.69
CCNC-201ENST00000326298 HSPB8Q9UJY1 196 aa4.5□□□□□ -1.69
CCNC-201ENST00000326298 E9PLD3 99 aa4.49□□□□□ -1.69
CCNC-201ENST00000326298 S100A7L2Q5SY68 101 aa4.49□□□□□ -1.69
CCNC-201ENST00000326298 KRTAP4-12Q9BQ66 201 aa4.49□□□□□ -1.69
CCNC-201ENST00000326298 NMUP48645 174 aa4.49□□□□□ -1.69
CCNC-201ENST00000326298 MIEN1Q9BRT3 115 aa4.49□□□□□ -1.69
CCNC-201ENST00000326298 SYS1-DBNDD2H3BUS1 97 aa4.48□□□□□ -1.69
CCNC-201ENST00000326298 HIST1H2BKO60814 126 aa4.48□□□□□ -1.69
CCNC-201ENST00000326298 HIST1H2BJP06899 126 aa4.48□□□□□ -1.69
CCNC-201ENST00000326298 HIST1H2BOP23527 126 aa4.48□□□□□ -1.69
CCNC-201ENST00000326298 HIST1H2BBP33778 126 aa4.48□□□□□ -1.69
CCNC-201ENST00000326298 HIST1H2BDP58876 126 aa4.48□□□□□ -1.69
CCNC-201ENST00000326298 HIST1H2BCP62807 126 aa4.48□□□□□ -1.69
CCNC-201ENST00000326298 HIST2H2BEQ16778 126 aa4.48□□□□□ -1.69
CCNC-201ENST00000326298 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.48□□□□□ -1.69
CCNC-201ENST00000326298 SSBP3-AS1Q7Z2R9 100 aa4.48□□□□□ -1.69
CCNC-201ENST00000326298 HIST1H2BHQ93079 126 aa4.48□□□□□ -1.69
CCNC-201ENST00000326298 HIST1H2BNQ99877 126 aa4.48□□□□□ -1.69
CCNC-201ENST00000326298 HIST1H2BMQ99879 126 aa4.48□□□□□ -1.69
CCNC-201ENST00000326298 HERVK_113P61574 105 aa4.48□□□□□ -1.69
CCNC-201ENST00000326298 C9orf153Q5TBE3 101 aa4.48□□□□□ -1.69
CCNC-201ENST00000326298 LINC00308Q8TCZ7 52 aa4.48□□□□□ -1.69
CCNC-201ENST00000326298 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
CCNC-201ENST00000326298 HRCT1Q6UXD1 115 aa4.47□□□□□ -1.69
CCNC-201ENST00000326298 A0A0G2JQZ4 141 aa4.46□□□□□ -1.69
CCNC-201ENST00000326298 KRTAP19-2Q3LHN2 52 aa4.46□□□□□ -1.69
CCNC-201ENST00000326298 LINC01545Q5VT33 79 aa4.46□□□□□ -1.7
CCNC-201ENST00000326298 RPS29P62273 56 aaKnown RBP4.45□□□□□ -1.7
CCNC-201ENST00000326298 S100A12P80511 92 aa4.45□□□□□ -1.7
CCNC-201ENST00000326298 OR13C6PQ8NH95 151 aa4.45□□□□□ -1.7
CCNC-201ENST00000326298 KRTAP9-8Q9BYQ0 159 aa4.45□□□□□ -1.7
CCNC-201ENST00000326298 SLC25A20O43772 301 aa4.45□□□□□ -1.7
CCNC-201ENST00000326298 SPANXCQ9NY87 97 aa4.45□□□□□ -1.7
CCNC-201ENST00000326298 C3orf79P0CE67 100 aa4.44□□□□□ -1.7
CCNC-201ENST00000326298 ZNF815PA8K554 130 aa4.44□□□□□ -1.7
CCNC-201ENST00000326298 JOSD1Q15040 202 aaPredicted RBP4.44□□□□□ -1.7
CCNC-201ENST00000326298 Q1RN00 199 aa4.44□□□□□ -1.7
CCNC-201ENST00000326298 C9orf92A6NGG3 77 aa4.43□□□□□ -1.7
CCNC-201ENST00000326298 SPRR1BP22528 89 aa4.43□□□□□ -1.7
CCNC-201ENST00000326298 C6orf99Q4VX62 202 aa4.43□□□□□ -1.7
CCNC-201ENST00000326298 ANKRD39Q53RE8 183 aa4.43□□□□□ -1.7
CCNC-201ENST00000326298 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
CCNC-201ENST00000326298 H7C2G1 150 aa4.42□□□□□ -1.7
CCNC-201ENST00000326298 SEC61BP60468 96 aaKnown RBP4.42□□□□□ -1.7
CCNC-201ENST00000326298 DEFB105AQ8NG35 78 aa4.42□□□□□ -1.7
CCNC-201ENST00000326298 ELOF1P60002 83 aaKnown RBP4.42□□□□□ -1.7
CCNC-201ENST00000326298 SMIM29Q86T20 159 aa4.42□□□□□ -1.7
CCNC-201ENST00000326298 ATOH7Q8N100 152 aa4.42□□□□□ -1.7
CCNC-201ENST00000326298 KRTAP4-2Q9BYR5 136 aa4.42□□□□□ -1.7
CCNC-201ENST00000326298 TIMM17BO60830 172 aa4.41□□□□□ -1.7
CCNC-201ENST00000326298 LINC01547P58512 204 aaPredicted RBP4.41□□□□□ -1.7
CCNC-201ENST00000326298 PCOTHQ58A44 107 aa4.41□□□□□ -1.7
CCNC-201ENST00000326298 PET117Q6UWS5 81 aa4.41□□□□□ -1.7
CCNC-201ENST00000326298 PCP2Q8IVA1 136 aa4.41□□□□□ -1.7
CCNC-201ENST00000326298 COX7BP24311 80 aa4.4□□□□□ -1.7
CCNC-201ENST00000326298 KRTDAPP60985 99 aa4.4□□□□□ -1.7
CCNC-201ENST00000326298 SPANXDQ9BXN6 97 aa4.4□□□□□ -1.7
CCNC-201ENST00000326298 KRTAP4-9Q9BYQ8 210 aa4.4□□□□□ -1.71
CCNC-201ENST00000326298 DHRS4-AS1Q9P1J3 65 aa4.4□□□□□ -1.71
CCNC-201ENST00000326298 FLGP20930 4061 aaPredicted RBP4.39□□□□□ -1.71
CCNC-201ENST00000326298 HINT1P49773 126 aaPredicted RBP4.39□□□□□ -1.71
CCNC-201ENST00000326298 MT1HP80294 61 aa4.39□□□□□ -1.71
CCNC-201ENST00000326298 C5orf52A6NGY3 159 aa4.38□□□□□ -1.71
CCNC-201ENST00000326298 TAL2Q16559 108 aa4.38□□□□□ -1.71
CCNC-201ENST00000326298 COA6Q5JTJ3 125 aaKnown RBP4.38□□□□□ -1.71
CCNC-201ENST00000326298 MUSTN1Q8IVN3 82 aa4.38□□□□□ -1.71
CCNC-201ENST00000326298 IGLV8-61A0A075B6I0 122 aa4.37□□□□□ -1.71
CCNC-201ENST00000326298 LAMTOR3Q9UHA4 124 aa4.37□□□□□ -1.71
CCNC-201ENST00000326298 C1orf195Q5TG92 126 aa4.37□□□□□ -1.71
CCNC-201ENST00000326298 SCGB1D4Q6XE38 83 aa4.37□□□□□ -1.71
CCNC-201ENST00000326298 A6NDN8 102 aa4.36□□□□□ -1.71
CCNC-201ENST00000326298 LINC00518Q8N0U6 118 aa4.36□□□□□ -1.71
CCNC-201ENST00000326298 IGLV5-48A0A075B6I7 105 aa4.36□□□□□ -1.71
CCNC-201ENST00000326298 TEX49A0A1B0GTD5 131 aa4.36□□□□□ -1.71
CCNC-201ENST00000326298 SMIM11BQ8TCY0 68 aa4.36□□□□□ -1.71
CCNC-201ENST00000326298 LIMD2Q9BT23 127 aa4.35□□□□□ -1.71
CCNC-201ENST00000326298 PRO1933Q9H354 126 aa4.34□□□□□ -1.71
CCNC-201ENST00000326298 SLC25A34Q6PIV7 304 aa4.34□□□□□ -1.72
CCNC-201ENST00000326298 CBY1Q9Y3M2 126 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms