RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 Q8NAQ8 132 aa11.3□□□□□ -0.6
SMCHD1-201ENST00000320876 SPANXA2-OT1Q8N9U9 137 aa11.3□□□□□ -0.6
SMCHD1-201ENST00000320876 A0A1B0GVX0 72 aa11.29□□□□□ -0.6
SMCHD1-201ENST00000320876 CDC42SE1Q9NRR8 79 aa11.29□□□□□ -0.6
SMCHD1-201ENST00000320876 LINC00588Q9Y4M8 146 aa11.29□□□□□ -0.6
SMCHD1-201ENST00000320876 IGFL1Q6UW32 110 aa11.29□□□□□ -0.6
SMCHD1-201ENST00000320876 LINC00528Q8N1L1 170 aa11.27□□□□□ -0.6
SMCHD1-201ENST00000320876 C8orf17Q9NRJ1 99 aa11.27□□□□□ -0.6
SMCHD1-201ENST00000320876 IGLV1-50A0A075B6I6 118 aa11.27□□□□□ -0.61
SMCHD1-201ENST00000320876 AKAP13Q12802 2813 aa11.26□□□□□ -0.61
SMCHD1-201ENST00000320876 C9orf129Q5T035 196 aaKnown RBP11.22□□□□□ -0.61
SMCHD1-201ENST00000320876 LUZP6Q538Z0 58 aa11.22□□□□□ -0.61
SMCHD1-201ENST00000320876 OBSCN-AS1Q96MR7 158 aa11.21□□□□□ -0.61
SMCHD1-201ENST00000320876 DSCR10P59022 87 aa11.21□□□□□ -0.61
SMCHD1-201ENST00000320876 EPG5Q9HCE0 2579 aa11.2□□□□□ -0.62
SMCHD1-201ENST00000320876 Q1T7F1 81 aa11.17□□□□□ -0.62
SMCHD1-201ENST00000320876 Q8N377 158 aa11.16□□□□□ -0.62
SMCHD1-201ENST00000320876 LINC00304Q8N9R0 145 aa11.16□□□□□ -0.62
SMCHD1-201ENST00000320876 KLK9Q2XQG4 91 aa11.13□□□□□ -0.63
SMCHD1-201ENST00000320876 COX6B2Q6YFQ2 88 aa11.13□□□□□ -0.63
SMCHD1-201ENST00000320876 FAM104AQ969W3 186 aa11.12□□□□□ -0.63
SMCHD1-201ENST00000320876 PLA2G2DQ9UNK4 145 aa11.12□□□□□ -0.63
SMCHD1-201ENST00000320876 ZNF861PO60384 105 aa11.11□□□□□ -0.63
SMCHD1-201ENST00000320876 FLNAP21333 2647 aaKnown RBP11.11□□□□□ -0.63
SMCHD1-201ENST00000320876 HECTD1Q9ULT8 2610 aa11.11□□□□□ -0.63
SMCHD1-201ENST00000320876 GOLGB1Q14789 3259 aaKnown RBP11.11□□□□□ -0.63
SMCHD1-201ENST00000320876 MGAM2Q2M2H8 2515 aa11.1□□□□□ -0.63
SMCHD1-201ENST00000320876 C15orf56Q8N910 161 aa11.1□□□□□ -0.63
SMCHD1-201ENST00000320876 CSNK1G2-AS1Q8NCQ2 148 aa11.1□□□□□ -0.63
SMCHD1-201ENST00000320876 PRR34Q9NV39 138 aa11.09□□□□□ -0.63
SMCHD1-201ENST00000320876 LINC01554Q52M75 96 aa11.08□□□□□ -0.64
SMCHD1-201ENST00000320876 TLX1NBP0CAT3 122 aa11.07□□□□□ -0.64
SMCHD1-201ENST00000320876 DNAH12Q6ZR08 3092 aa11.07□□□□□ -0.64
SMCHD1-201ENST00000320876 EIF4EBP3O60516 100 aaPredicted RBP11.06□□□□□ -0.64
SMCHD1-201ENST00000320876 C9orf92A6NGG3 77 aa11.06□□□□□ -0.64
SMCHD1-201ENST00000320876 CENPEQ02224 2701 aa11.06□□□□□ -0.64
SMCHD1-201ENST00000320876 A0A0D9SG42 100 aa11.05□□□□□ -0.64
SMCHD1-201ENST00000320876 ATRQ13535 2644 aa11.05□□□□□ -0.64
SMCHD1-201ENST00000320876 WIPF1O43516 503 aa11.05□□□□□ -0.64
SMCHD1-201ENST00000320876 RBM12B-AS1Q9P1G2 102 aa11.04□□□□□ -0.64
SMCHD1-201ENST00000320876 NBEAL1Q6ZS30 2694 aa11.03□□□□□ -0.64
SMCHD1-201ENST00000320876 MAST4O15021 2626 aa11□□□□□ -0.65
SMCHD1-201ENST00000320876 J3QL48 77 aa11□□□□□ -0.65
SMCHD1-201ENST00000320876 IGLV5-37A0A075B6J1 123 aa10.98□□□□□ -0.65
SMCHD1-201ENST00000320876 Q75L30 129 aa10.98□□□□□ -0.65
SMCHD1-201ENST00000320876 CFAP46Q8IYW2 2715 aa10.98□□□□□ -0.65
SMCHD1-201ENST00000320876 OCR1Q9BZK8 76 aa10.96□□□□□ -0.66
SMCHD1-201ENST00000320876 IGLV5-48A0A075B6I7 105 aa10.96□□□□□ -0.66
SMCHD1-201ENST00000320876 ITPR3Q14573 2671 aa10.95□□□□□ -0.66
SMCHD1-201ENST00000320876 LINC00483Q53H64 154 aa10.95□□□□□ -0.66
SMCHD1-201ENST00000320876 Q8N1X5 172 aa10.94□□□□□ -0.66
SMCHD1-201ENST00000320876 A0A0G2JQZ4 141 aa10.93□□□□□ -0.66
SMCHD1-201ENST00000320876 A0A1W2PNN7 141 aa10.93□□□□□ -0.66
SMCHD1-201ENST00000320876 SPRR4Q96PI1 79 aa10.92□□□□□ -0.66
SMCHD1-201ENST00000320876 WWC2-AS2Q96NR7 200 aa10.92□□□□□ -0.66
SMCHD1-201ENST00000320876 IGLV7-43P04211 117 aa10.9□□□□□ -0.66
SMCHD1-201ENST00000320876 KRTAP24-1Q3LI83 254 aa10.89□□□□□ -0.67
SMCHD1-201ENST00000320876 CHD6Q8TD26 2715 aa10.88□□□□□ -0.67
SMCHD1-201ENST00000320876 A0A1W2PNM2 257 aa10.88□□□□□ -0.67
SMCHD1-201ENST00000320876 CNBPP62633 177 aaKnown RBP10.87□□□□□ -0.67
SMCHD1-201ENST00000320876 C9orf163Q8N9P6 203 aa10.86□□□□□ -0.67
SMCHD1-201ENST00000320876 IGLV7-46A0A075B6I9 117 aa10.86□□□□□ -0.67
SMCHD1-201ENST00000320876 PSORS1C2Q9UIG4 136 aa10.85□□□□□ -0.67
SMCHD1-201ENST00000320876 LINC00612Q8N6U2 182 aa10.85□□□□□ -0.67
SMCHD1-201ENST00000320876 A0A087WTM6 91 aa10.85□□□□□ -0.67
SMCHD1-201ENST00000320876 A0A1B0GU33 70 aa10.85□□□□□ -0.67
SMCHD1-201ENST00000320876 FLNBO75369 2602 aaKnown RBP10.84□□□□□ -0.67
SMCHD1-201ENST00000320876 ANAPC11Q9NYG5 84 aa10.83□□□□□ -0.68
SMCHD1-201ENST00000320876 GCN1Q92616 2671 aaKnown RBP10.82□□□□□ -0.68
SMCHD1-201ENST00000320876 CEP350Q5VT06 3117 aa10.81□□□□□ -0.68
SMCHD1-201ENST00000320876 H3BS24 57 aa10.81□□□□□ -0.68
SMCHD1-201ENST00000320876 KRTAP10-11P60412 298 aa10.81□□□□□ -0.68
SMCHD1-201ENST00000320876 GIG44P09565 113 aaPredicted RBP10.8□□□□□ -0.68
SMCHD1-201ENST00000320876 PRR26Q8N8Z3 221 aa10.77□□□□□ -0.69
SMCHD1-201ENST00000320876 C19orf73Q9NVV2 129 aa10.77□□□□□ -0.69
SMCHD1-201ENST00000320876 ZNF575Q86XF7 245 aa10.76□□□□□ -0.69
SMCHD1-201ENST00000320876 A0A0A0MQY5 61 aa10.76□□□□□ -0.69
SMCHD1-201ENST00000320876 DMAC1Q96GE9 116 aa10.75□□□□□ -0.69
SMCHD1-201ENST00000320876 C5orf42Q9H799 3197 aa10.73□□□□□ -0.69
SMCHD1-201ENST00000320876 K7EIL1 84 aa10.73□□□□□ -0.69
SMCHD1-201ENST00000320876 CAMK2N1Q7Z7J9 78 aa10.73□□□□□ -0.69
SMCHD1-201ENST00000320876 HELZ2Q9BYK8 2649 aaKnown RBP10.72□□□□□ -0.69
SMCHD1-201ENST00000320876 Q5XG85 94 aa10.72□□□□□ -0.69
SMCHD1-201ENST00000320876 FAM229BQ4G0N7 80 aa10.71□□□□□ -0.69
SMCHD1-201ENST00000320876 STAB1Q9NY15 2570 aa10.71□□□□□ -0.7
SMCHD1-201ENST00000320876 NOTCH1P46531 2555 aa10.7□□□□□ -0.7
SMCHD1-201ENST00000320876 DMBT1Q9UGM3 2413 aaPredicted RBP10.7□□□□□ -0.7
SMCHD1-201ENST00000320876 HRES1P13985 223 aa10.69□□□□□ -0.7
SMCHD1-201ENST00000320876 TEX15Q9BXT5 2789 aa10.69□□□□□ -0.7
SMCHD1-201ENST00000320876 LINC01558Q9Y6Z2 57 aa10.68□□□□□ -0.7
SMCHD1-201ENST00000320876 Q8N9P0 234 aaPredicted RBP10.67□□□□□ -0.7
SMCHD1-201ENST00000320876 UTRNP46939 3433 aa10.65□□□□□ -0.71
SMCHD1-201ENST00000320876 SMR3BP02814 79 aaPredicted RBP10.65□□□□□ -0.71
SMCHD1-201ENST00000320876 COL6A5A8TX70 2615 aa10.63□□□□□ -0.71
SMCHD1-201ENST00000320876 Q6ZSA8 131 aa10.63□□□□□ -0.71
SMCHD1-201ENST00000320876 PCNTO95613 3336 aa10.62□□□□□ -0.71
SMCHD1-201ENST00000320876 CSAG1Q6PB30 78 aa10.62□□□□□ -0.71
SMCHD1-201ENST00000320876 UNC79Q9P2D8 2635 aa10.62□□□□□ -0.71
SMCHD1-201ENST00000320876 Q5VV11 94 aa10.61□□□□□ -0.71
SMCHD1-201ENST00000320876 CFAP54Q96N23 3096 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms