RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 PRR15Q8IV56 129 aa8.77□□□□□ -1
CPNE1-201ENST00000317677 LINC00158P58513 81 aa8.77□□□□□ -1.01
CPNE1-201ENST00000317677 WFDC10BQ8IUB3 73 aa8.77□□□□□ -1.01
CPNE1-201ENST00000317677 IGLV10-54A0A075B6I4 117 aa8.76□□□□□ -1.01
CPNE1-201ENST00000317677 ESRGQ1W209 222 aa8.76□□□□□ -1.01
CPNE1-201ENST00000317677 Q6ZQT0 140 aa8.76□□□□□ -1.01
CPNE1-201ENST00000317677 Q6ZRU5 148 aa8.75□□□□□ -1.01
CPNE1-201ENST00000317677 CHCHD10Q8WYQ3 142 aaPredicted RBP8.75□□□□□ -1.01
CPNE1-201ENST00000317677 WWC2-AS2Q96NR7 200 aa8.75□□□□□ -1.01
CPNE1-201ENST00000317677 TOMM7Q9P0U1 55 aa8.75□□□□□ -1.01
CPNE1-201ENST00000317677 PMAIP1Q13794 54 aa8.75□□□□□ -1.01
CPNE1-201ENST00000317677 PRR34Q9NV39 138 aa8.75□□□□□ -1.01
CPNE1-201ENST00000317677 PDE6GP18545 87 aa8.74□□□□□ -1.01
CPNE1-201ENST00000317677 KLK12Q9UKR0 248 aa8.74□□□□□ -1.01
CPNE1-201ENST00000317677 CD164L2Q6UWJ8 174 aa8.73□□□□□ -1.01
CPNE1-201ENST00000317677 STAB2Q8WWQ8 2551 aa8.73□□□□□ -1.01
CPNE1-201ENST00000317677 Q6ZVQ6 151 aa8.72□□□□□ -1.01
CPNE1-201ENST00000317677 KIAA0087Q14695 138 aa8.72□□□□□ -1.01
CPNE1-201ENST00000317677 C6orf223Q8N319 242 aa8.72□□□□□ -1.01
CPNE1-201ENST00000317677 TMEM254Q8TBM7 123 aa8.71□□□□□ -1.02
CPNE1-201ENST00000317677 H3BQ85 93 aa8.7□□□□□ -1.02
CPNE1-201ENST00000317677 FAM229BQ4G0N7 80 aa8.7□□□□□ -1.02
CPNE1-201ENST00000317677 Q8IZM0 81 aa8.7□□□□□ -1.02
CPNE1-201ENST00000317677 ZNF561-AS1K7EIQ3 104 aa8.69□□□□□ -1.02
CPNE1-201ENST00000317677 HAMPP81172 84 aa8.69□□□□□ -1.02
CPNE1-201ENST00000317677 KRTAP26-1Q6PEX3 210 aa8.68□□□□□ -1.02
CPNE1-201ENST00000317677 NREPQ16612 68 aa8.68□□□□□ -1.02
CPNE1-201ENST00000317677 MPLKIPQ8TAP9 179 aa8.68□□□□□ -1.02
CPNE1-201ENST00000317677 DNAH1Q9P2D7 4330 aa8.68□□□□□ -1.02
CPNE1-201ENST00000317677 C3orf84H3BNL1 204 aa8.66□□□□□ -1.02
CPNE1-201ENST00000317677 DYNC2H1Q8NCM8 4307 aaKnown RBP8.65□□□□□ -1.02
CPNE1-201ENST00000317677 CD164Q04900 197 aa8.65□□□□□ -1.02
CPNE1-201ENST00000317677 Q1T7F1 81 aa8.65□□□□□ -1.02
CPNE1-201ENST00000317677 LINC01556Q5JQF7 62 aa8.65□□□□□ -1.02
CPNE1-201ENST00000317677 LINC00588Q9Y4M8 146 aa8.65□□□□□ -1.02
CPNE1-201ENST00000317677 DNAH7Q8WXX0 4024 aa8.65□□□□□ -1.03
CPNE1-201ENST00000317677 FUSP35637 526 aaKnown RBP eCLIP8.64□□□□□ -1.031e-10■■□□□ 12.2
CPNE1-201ENST00000317677 LINC00575Q6W349 94 aa8.64□□□□□ -1.03
CPNE1-201ENST00000317677 PRYO14603 147 aa8.64□□□□□ -1.03
CPNE1-201ENST00000317677 BPY2O14599 106 aa8.63□□□□□ -1.03
CPNE1-201ENST00000317677 C10orf25Q5T742 122 aa8.63□□□□□ -1.03
CPNE1-201ENST00000317677 DNAH10OSP0CZ25 163 aa8.62□□□□□ -1.03
CPNE1-201ENST00000317677 MUC7Q8TAX7 377 aa8.62□□□□□ -1.03
CPNE1-201ENST00000317677 SPAG11BQ08648 103 aa8.62□□□□□ -1.03
CPNE1-201ENST00000317677 C9orf116Q5BN46 136 aaPredicted RBP8.62□□□□□ -1.03
CPNE1-201ENST00000317677 M0R2N4 97 aa8.61□□□□□ -1.03
CPNE1-201ENST00000317677 OCR1Q9BZK8 76 aa8.61□□□□□ -1.03
CPNE1-201ENST00000317677 UNQ6190/PRO20217Q6UXQ8 127 aa8.6□□□□□ -1.03
CPNE1-201ENST00000317677 hDV103S1A0JD37 113 aa8.59□□□□□ -1.03
CPNE1-201ENST00000317677 C15orf56Q8N910 161 aa8.59□□□□□ -1.03
CPNE1-201ENST00000317677 COX17Q14061 63 aa8.58□□□□□ -1.04
CPNE1-201ENST00000317677 CASC10Q5T4H9 136 aa8.57□□□□□ -1.04
CPNE1-201ENST00000317677 CSMD3Q7Z407 3707 aa8.57□□□□□ -1.04
CPNE1-201ENST00000317677 HIGD2BQ4VC39 106 aa8.57□□□□□ -1.04
CPNE1-201ENST00000317677 C6orf99Q4VX62 202 aa8.57□□□□□ -1.04
CPNE1-201ENST00000317677 Q8NDZ9 215 aa8.56□□□□□ -1.04
CPNE1-201ENST00000317677 KMT2CQ8NEZ4 4911 aaKnown RBP8.56□□□□□ -1.04
CPNE1-201ENST00000317677 IGKV2D-24A0A075B6R9 120 aa8.55□□□□□ -1.04
CPNE1-201ENST00000317677 C6orf48Q9UBA6 75 aa8.55□□□□□ -1.04
CPNE1-201ENST00000317677 LYSTQ99698 3801 aa8.55□□□□□ -1.04
CPNE1-201ENST00000317677 PLECQ15149 4684 aaKnown RBP8.55□□□□□ -1.04
CPNE1-201ENST00000317677 APLNQ9ULZ1 77 aa8.55□□□□□ -1.04
CPNE1-201ENST00000317677 PRR3P79522 188 aaKnown RBP8.54□□□□□ -1.04
CPNE1-201ENST00000317677 Q6ZRP5 223 aa8.54□□□□□ -1.04
CPNE1-201ENST00000317677 GVQW2A0A096LPI5 108 aaPredicted RBP8.53□□□□□ -1.04
CPNE1-201ENST00000317677 LCE6AA0A183 80 aa8.53□□□□□ -1.04
CPNE1-201ENST00000317677 IGKV4-1P06312 121 aa8.52□□□□□ -1.05
CPNE1-201ENST00000317677 KRTAP1-5Q9BYS1 174 aa8.52□□□□□ -1.05
CPNE1-201ENST00000317677 DNAH10Q8IVF4 4471 aa8.51□□□□□ -1.05
CPNE1-201ENST00000317677 CAMK2N2Q96S95 79 aa8.5□□□□□ -1.05
CPNE1-201ENST00000317677 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.49□□□□□ -1.05
CPNE1-201ENST00000317677 HIGD2AQ9BW72 106 aa8.49□□□□□ -1.05
CPNE1-201ENST00000317677 TENM2Q9NT68 2774 aa8.49□□□□□ -1.05
CPNE1-201ENST00000317677 STARD9Q9P2P6 4700 aa8.48□□□□□ -1.05
CPNE1-201ENST00000317677 Q6ZQY7 126 aa8.48□□□□□ -1.05
CPNE1-201ENST00000317677 SCXQ7RTU7 201 aa8.48□□□□□ -1.05
CPNE1-201ENST00000317677 COX7BP24311 80 aa8.48□□□□□ -1.05
CPNE1-201ENST00000317677 C1orf64Q8NEQ6 169 aa8.48□□□□□ -1.05
CPNE1-201ENST00000317677 VPS13DQ5THJ4 4388 aa8.47□□□□□ -1.05
CPNE1-201ENST00000317677 IGLV6-57P01721 117 aa8.47□□□□□ -1.05
CPNE1-201ENST00000317677 CYP4F30PQ9H0H9 118 aa8.47□□□□□ -1.05
CPNE1-201ENST00000317677 TRAV22A0A0B4J277 110 aa8.46□□□□□ -1.05
CPNE1-201ENST00000317677 RYR3Q15413 4870 aa8.46□□□□□ -1.05
CPNE1-201ENST00000317677 XAGE1AQ9HD64 81 aa8.46□□□□□ -1.06
CPNE1-201ENST00000317677 ZCCHC13Q8WW36 166 aaKnown RBP8.45□□□□□ -1.06
CPNE1-201ENST00000317677 MRPL55Q7Z7F7 128 aaKnown RBP8.44□□□□□ -1.06
CPNE1-201ENST00000317677 SYCNQ0VAF6 134 aa8.43□□□□□ -1.06
CPNE1-201ENST00000317677 NUPR2A6NF83 97 aa8.42□□□□□ -1.06
CPNE1-201ENST00000317677 UBE2DNLQ8IWF7 75 aa8.42□□□□□ -1.06
CPNE1-201ENST00000317677 UBE2BP63146 152 aa8.41□□□□□ -1.06
CPNE1-201ENST00000317677 KTN1-AS1Q86SY8 53 aa8.41□□□□□ -1.06
CPNE1-201ENST00000317677 RYR2Q92736 4967 aa8.41□□□□□ -1.06
CPNE1-201ENST00000317677 PSPHP1O15172 72 aa8.4□□□□□ -1.06
CPNE1-201ENST00000317677 PSCAO43653 123 aa8.4□□□□□ -1.06
CPNE1-201ENST00000317677 VPREB1P12018 145 aa8.4□□□□□ -1.06
CPNE1-201ENST00000317677 A0A1B0GW54 56 aa8.39□□□□□ -1.07
CPNE1-201ENST00000317677 ALMS1Q8TCU4 4167 aa8.39□□□□□ -1.07
CPNE1-201ENST00000317677 SACSQ9NZJ4 4579 aa8.39□□□□□ -1.07
CPNE1-201ENST00000317677 Q8N9L7 120 aa8.39□□□□□ -1.07
CPNE1-201ENST00000317677 DIRC1Q969H9 104 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms