RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 PRB2P02812 416 aaPredicted RBP12.96□□□□□ -0.34
ZNF554-201ENST00000317243 TMEM254Q8TBM7 123 aa12.96□□□□□ -0.34
ZNF554-201ENST00000317243 Q6ZTC4 211 aa12.95□□□□□ -0.34
ZNF554-201ENST00000317243 Q8N9L7 120 aa12.95□□□□□ -0.34
ZNF554-201ENST00000317243 WFDC10BQ8IUB3 73 aa12.95□□□□□ -0.34
ZNF554-201ENST00000317243 DNAH3Q8TD57 4116 aa12.95□□□□□ -0.34
ZNF554-201ENST00000317243 LYSTQ99698 3801 aa12.94□□□□□ -0.34
ZNF554-201ENST00000317243 BPY2O14599 106 aa12.94□□□□□ -0.34
ZNF554-201ENST00000317243 PDE6GP18545 87 aa12.93□□□□□ -0.34
ZNF554-201ENST00000317243 BAHCC1Q9P281 2608 aa12.93□□□□□ -0.34
ZNF554-201ENST00000317243 LELP1Q5T871 98 aa12.92□□□□□ -0.34
ZNF554-201ENST00000317243 IGLV6-57P01721 117 aa12.91□□□□□ -0.34
ZNF554-201ENST00000317243 ATP5EP56381 51 aaPredicted RBP12.9□□□□□ -0.35
ZNF554-201ENST00000317243 MGAM2Q2M2H8 2515 aa12.89□□□□□ -0.35
ZNF554-201ENST00000317243 KPRPQ5T749 579 aaPredicted RBP12.89□□□□□ -0.35
ZNF554-201ENST00000317243 A0A0J9YWU9 116 aa12.87□□□□□ -0.35
ZNF554-201ENST00000317243 HIGD2BQ4VC39 106 aa12.87□□□□□ -0.35
ZNF554-201ENST00000317243 DIRC1Q969H9 104 aa12.87□□□□□ -0.35
ZNF554-201ENST00000317243 C6orf48Q9UBA6 75 aa12.86□□□□□ -0.35
ZNF554-201ENST00000317243 PRR34Q9NV39 138 aa12.85□□□□□ -0.35
ZNF554-201ENST00000317243 C1orf195Q5TG92 126 aa12.85□□□□□ -0.35
ZNF554-201ENST00000317243 COL7A1Q02388 2944 aa12.84□□□□□ -0.35
ZNF554-201ENST00000317243 ZNF73O43830 326 aaPredicted RBP12.84□□□□□ -0.35
ZNF554-201ENST00000317243 F8WDY8 70 aa12.83□□□□□ -0.35
ZNF554-201ENST00000317243 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.83□□□□□ -0.36
ZNF554-201ENST00000317243 PRYO14603 147 aa12.82□□□□□ -0.36
ZNF554-201ENST00000317243 HUWE1Q7Z6Z7 4374 aaKnown RBP12.82□□□□□ -0.36
ZNF554-201ENST00000317243 ESRGQ1W209 222 aa12.82□□□□□ -0.36
ZNF554-201ENST00000317243 COX7BP24311 80 aa12.82□□□□□ -0.36
ZNF554-201ENST00000317243 FUSP35637 526 aaKnown RBP eCLIP12.81□□□□□ -0.36
ZNF554-201ENST00000317243 IGKV4-1P06312 121 aa12.8□□□□□ -0.36
ZNF554-201ENST00000317243 HIGD2AQ9BW72 106 aa12.8□□□□□ -0.36
ZNF554-201ENST00000317243 OCR1Q9BZK8 76 aa12.8□□□□□ -0.36
ZNF554-201ENST00000317243 H3BQ85 93 aa12.79□□□□□ -0.36
ZNF554-201ENST00000317243 ERC2-IT1O76042 136 aa12.79□□□□□ -0.36
ZNF554-201ENST00000317243 V9GYY9 64 aa12.77□□□□□ -0.36
ZNF554-201ENST00000317243 CAMK2N2Q96S95 79 aa12.77□□□□□ -0.37
ZNF554-201ENST00000317243 DNAH10Q8IVF4 4471 aa12.76□□□□□ -0.37
ZNF554-201ENST00000317243 EGFEM1PQ0D2K5 195 aa12.76□□□□□ -0.37
ZNF554-201ENST00000317243 TENM2Q9NT68 2774 aa12.76□□□□□ -0.37
ZNF554-201ENST00000317243 CSMD3Q7Z407 3707 aa12.76□□□□□ -0.37
ZNF554-201ENST00000317243 STAB2Q8WWQ8 2551 aa12.75□□□□□ -0.37
ZNF554-201ENST00000317243 ELOF1P60002 83 aaKnown RBP12.75□□□□□ -0.37
ZNF554-201ENST00000317243 GVQW2A0A096LPI5 108 aaPredicted RBP12.75□□□□□ -0.37
ZNF554-201ENST00000317243 LRCOL1A6NCL2 159 aa12.75□□□□□ -0.37
ZNF554-201ENST00000317243 C3orf84H3BNL1 204 aa12.75□□□□□ -0.37
ZNF554-201ENST00000317243 DEFB131BA0A096LNP1 70 aa12.74□□□□□ -0.37
ZNF554-201ENST00000317243 KRTAP26-1Q6PEX3 210 aa12.74□□□□□ -0.37
ZNF554-201ENST00000317243 VPREB1P12018 145 aa12.72□□□□□ -0.37
ZNF554-201ENST00000317243 C11orf45Q8TAV5 145 aa12.72□□□□□ -0.37
ZNF554-201ENST00000317243 SEC61GP60059 68 aa12.71□□□□□ -0.37
ZNF554-201ENST00000317243 Q6ZRU5 148 aa12.71□□□□□ -0.38
ZNF554-201ENST00000317243 C15orf56Q8N910 161 aa12.71□□□□□ -0.38
ZNF554-201ENST00000317243 FAM30AQ9NZY2 134 aa12.69□□□□□ -0.38
ZNF554-201ENST00000317243 DNAH1Q9P2D7 4330 aa12.69□□□□□ -0.38
ZNF554-201ENST00000317243 IGKV2D-24A0A075B6R9 120 aa12.68□□□□□ -0.38
ZNF554-201ENST00000317243 DEFB105AQ8NG35 78 aa12.68□□□□□ -0.38
ZNF554-201ENST00000317243 M0R378 163 aa12.67□□□□□ -0.38
ZNF554-201ENST00000317243 CASC10Q5T4H9 136 aa12.65□□□□□ -0.38
ZNF554-201ENST00000317243 SMIM29Q86T20 159 aa12.65□□□□□ -0.38
ZNF554-201ENST00000317243 LINC00528Q8N1L1 170 aa12.65□□□□□ -0.38
ZNF554-201ENST00000317243 DNAH9Q9NYC9 4486 aa12.64□□□□□ -0.39
ZNF554-201ENST00000317243 DNAH7Q8WXX0 4024 aa12.63□□□□□ -0.39
ZNF554-201ENST00000317243 H3BNG1 76 aa12.62□□□□□ -0.39
ZNF554-201ENST00000317243 Q6ZRP5 223 aa12.62□□□□□ -0.39
ZNF554-201ENST00000317243 hDV103S1A0JD37 113 aa12.62□□□□□ -0.39
ZNF554-201ENST00000317243 C1orf64Q8NEQ6 169 aa12.59□□□□□ -0.39
ZNF554-201ENST00000317243 K7EIL1 84 aa12.58□□□□□ -0.4
ZNF554-201ENST00000317243 LINC00588Q9Y4M8 146 aa12.58□□□□□ -0.4
ZNF554-201ENST00000317243 LINC01556Q5JQF7 62 aa12.57□□□□□ -0.4
ZNF554-201ENST00000317243 PSPHP1O15172 72 aa12.56□□□□□ -0.4
ZNF554-201ENST00000317243 PRR4Q16378 134 aa12.55□□□□□ -0.4
ZNF554-201ENST00000317243 NKAPP1Q8N9T2 125 aa12.54□□□□□ -0.4
ZNF554-201ENST00000317243 SERTAD4-AS1Q5TG53 156 aa12.53□□□□□ -0.4
ZNF554-201ENST00000317243 PRR15Q8IV56 129 aa12.53□□□□□ -0.4
ZNF554-201ENST00000317243 Q8N377 158 aa12.53□□□□□ -0.4
ZNF554-201ENST00000317243 RPL37AP8A6NKH3 93 aa12.52□□□□□ -0.41
ZNF554-201ENST00000317243 Q1T7F1 81 aa12.51□□□□□ -0.41
ZNF554-201ENST00000317243 FAM168BA1KXE4 195 aa12.51□□□□□ -0.41
ZNF554-201ENST00000317243 SYCNQ0VAF6 134 aa12.51□□□□□ -0.41
ZNF554-201ENST00000317243 PMAIP1Q13794 54 aa12.5□□□□□ -0.41
ZNF554-201ENST00000317243 C7orf33Q8WU49 177 aa12.5□□□□□ -0.41
ZNF554-201ENST00000317243 LCE6AA0A183 80 aa12.49□□□□□ -0.41
ZNF554-201ENST00000317243 DNAH10OSP0CZ25 163 aa12.49□□□□□ -0.41
ZNF554-201ENST00000317243 A0A1W2PNM2 257 aa12.48□□□□□ -0.41
ZNF554-201ENST00000317243 IGLV5-48A0A075B6I7 105 aa12.46□□□□□ -0.41
ZNF554-201ENST00000317243 TRAV22A0A0B4J277 110 aa12.46□□□□□ -0.41
ZNF554-201ENST00000317243 KCNQ1DNQ9H478 68 aa12.46□□□□□ -0.41
ZNF554-201ENST00000317243 ZCCHC13Q8WW36 166 aaKnown RBP12.46□□□□□ -0.41
ZNF554-201ENST00000317243 PLECQ15149 4684 aaKnown RBP12.46□□□□□ -0.42
ZNF554-201ENST00000317243 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.46□□□□□ -0.42
ZNF554-201ENST00000317243 SRRM2Q9UQ35 2752 aaKnown RBP12.45□□□□□ -0.42
ZNF554-201ENST00000317243 ST20-AS1Q8NBB2 130 aa12.45□□□□□ -0.42
ZNF554-201ENST00000317243 ETDCA0A1B0GVM5 59 aa12.44□□□□□ -0.42
ZNF554-201ENST00000317243 K7EQZ3 153 aa12.43□□□□□ -0.42
ZNF554-201ENST00000317243 DSCR10P59022 87 aa12.42□□□□□ -0.42
ZNF554-201ENST00000317243 C1orf137Q5JT78 98 aa12.41□□□□□ -0.42
ZNF554-201ENST00000317243 Q9BRP9 147 aa12.41□□□□□ -0.42
ZNF554-201ENST00000317243 KRTAP1-5Q9BYS1 174 aa12.41□□□□□ -0.42
ZNF554-201ENST00000317243 KRTAP7-1Q8IUC3 87 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms