RNA–Protein interactions for RNA: ENST00000308249.3

PPM1E-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1E, Length 6,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1E-201ENST00000308249 LINC00528Q8N1L1 170 aa10.4□□□□□ -0.75
PPM1E-201ENST00000308249 GOLGB1Q14789 3259 aaKnown RBP10.39□□□□□ -0.75
PPM1E-201ENST00000308249 Q8N377 158 aa10.39□□□□□ -0.75
PPM1E-201ENST00000308249 Q1T7F1 81 aa10.39□□□□□ -0.75
PPM1E-201ENST00000308249 LITAFQ99732 161 aa10.38□□□□□ -0.75
PPM1E-201ENST00000308249 ACANP16112 2415 aa10.37□□□□□ -0.75
PPM1E-201ENST00000308249 CPAMD8Q8IZJ3 1885 aa10.36□□□□□ -0.75
PPM1E-201ENST00000308249 Q6ZSA8 131 aa10.36□□□□□ -0.75
PPM1E-201ENST00000308249 NCOR2Q9Y618 2525 aa10.35□□□□□ -0.75
PPM1E-201ENST00000308249 ABCA12Q86UK0 2595 aa10.35□□□□□ -0.75
PPM1E-201ENST00000308249 LTBP2Q14767 1821 aa10.35□□□□□ -0.75
PPM1E-201ENST00000308249 IGF2RP11717 2491 aa10.34□□□□□ -0.75
PPM1E-201ENST00000308249 A0A087WTM6 91 aa10.34□□□□□ -0.75
PPM1E-201ENST00000308249 IGLV7-43P04211 117 aa10.34□□□□□ -0.75
PPM1E-201ENST00000308249 KLKP1Q107X0 134 aa10.33□□□□□ -0.76
PPM1E-201ENST00000308249 TLX1NBP0CAT3 122 aa10.32□□□□□ -0.76
PPM1E-201ENST00000308249 C9orf163Q8N9P6 203 aa10.32□□□□□ -0.76
PPM1E-201ENST00000308249 PSORS1C2Q9UIG4 136 aa10.3□□□□□ -0.76
PPM1E-201ENST00000308249 H7BZZ5 65 aa10.3□□□□□ -0.76
PPM1E-201ENST00000308249 PRR26Q8N8Z3 221 aa10.3□□□□□ -0.76
PPM1E-201ENST00000308249 KRTAP10-11P60412 298 aa10.27□□□□□ -0.76
PPM1E-201ENST00000308249 K7EIL1 84 aa10.27□□□□□ -0.77
PPM1E-201ENST00000308249 EIF4EBP3O60516 100 aaPredicted RBP10.27□□□□□ -0.77
PPM1E-201ENST00000308249 EP400Q96L91 3159 aa10.26□□□□□ -0.77
PPM1E-201ENST00000308249 PTPRBP23467 1997 aa10.25□□□□□ -0.77
PPM1E-201ENST00000308249 A0A1B0GU33 70 aa10.24□□□□□ -0.77
PPM1E-201ENST00000308249 SPRR4Q96PI1 79 aa10.24□□□□□ -0.77
PPM1E-201ENST00000308249 A0A0A0MQY5 61 aa10.23□□□□□ -0.77
PPM1E-201ENST00000308249 COL27A1Q8IZC6 1860 aaPredicted RBP10.18□□□□□ -0.78
PPM1E-201ENST00000308249 IGLV7-46A0A075B6I9 117 aa10.18□□□□□ -0.78
PPM1E-201ENST00000308249 CASC10Q5T4H9 136 aa10.18□□□□□ -0.78
PPM1E-201ENST00000308249 PLA2G2DQ9UNK4 145 aa10.18□□□□□ -0.78
PPM1E-201ENST00000308249 SPANXA2-OT1Q8N9U9 137 aa10.18□□□□□ -0.78
PPM1E-201ENST00000308249 PKD1L2Q7Z442 2459 aa10.17□□□□□ -0.78
PPM1E-201ENST00000308249 A0A1W2PNM2 257 aa10.17□□□□□ -0.78
PPM1E-201ENST00000308249 SETD2Q9BYW2 2564 aaPredicted RBP10.15□□□□□ -0.78
PPM1E-201ENST00000308249 H3BS24 57 aa10.15□□□□□ -0.78
PPM1E-201ENST00000308249 LINC00612Q8N6U2 182 aa10.15□□□□□ -0.79
PPM1E-201ENST00000308249 PRR34Q9NV39 138 aa10.14□□□□□ -0.79
PPM1E-201ENST00000308249 MUC22E2RYF6 1773 aaPredicted RBP10.12□□□□□ -0.79
PPM1E-201ENST00000308249 PRAC1Q96KF2 57 aa10.11□□□□□ -0.79
PPM1E-201ENST00000308249 SPINK7P58062 85 aa10.11□□□□□ -0.79
PPM1E-201ENST00000308249 USP9XQ93008 2570 aaPredicted RBP10.08□□□□□ -0.8
PPM1E-201ENST00000308249 HRES1P13985 223 aa10.07□□□□□ -0.8
PPM1E-201ENST00000308249 S4R3F8 94 aa10.07□□□□□ -0.8
PPM1E-201ENST00000308249 C19orf73Q9NVV2 129 aa10.07□□□□□ -0.8
PPM1E-201ENST00000308249 CSAG1Q6PB30 78 aa10.05□□□□□ -0.8
PPM1E-201ENST00000308249 PIEZO1Q92508 2521 aa10.04□□□□□ -0.8
PPM1E-201ENST00000308249 UTRNP46939 3433 aa10.02□□□□□ -0.81
PPM1E-201ENST00000308249 GIG44P09565 113 aaPredicted RBP10.01□□□□□ -0.81
PPM1E-201ENST00000308249 DMAC1Q96GE9 116 aa10.01□□□□□ -0.81
PPM1E-201ENST00000308249 R4GN34 69 aa10.01□□□□□ -0.81
PPM1E-201ENST00000308249 KRTAP10-3P60369 221 aa10□□□□□ -0.81
PPM1E-201ENST00000308249 TNP2Q05952 138 aa9.99□□□□□ -0.81
PPM1E-201ENST00000308249 CNBPP62633 177 aaKnown RBP9.98□□□□□ -0.81
PPM1E-201ENST00000308249 C10orf142B7Z368 130 aa9.97□□□□□ -0.81
PPM1E-201ENST00000308249 H1FX-AS1Q4G0G2 97 aa9.95□□□□□ -0.82
PPM1E-201ENST00000308249 Q75L30 129 aa9.94□□□□□ -0.82
PPM1E-201ENST00000308249 Q8N9P0 234 aaPredicted RBP9.93□□□□□ -0.82
PPM1E-201ENST00000308249 OCR1Q9BZK8 76 aa9.93□□□□□ -0.82
PPM1E-201ENST00000308249 ZCCHC13Q8WW36 166 aaKnown RBP9.91□□□□□ -0.82
PPM1E-201ENST00000308249 CR1P17927 2039 aa9.9□□□□□ -0.83
PPM1E-201ENST00000308249 COL4A2P08572 1712 aa9.88□□□□□ -0.83
PPM1E-201ENST00000308249 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.88□□□□□ -0.83
PPM1E-201ENST00000308249 FAM229BQ4G0N7 80 aa9.88□□□□□ -0.83
PPM1E-201ENST00000308249 MTORP42345 2549 aa9.84□□□□□ -0.83
PPM1E-201ENST00000308249 PLAC4Q8WY50 150 aa9.84□□□□□ -0.83
PPM1E-201ENST00000308249 LINC01558Q9Y6Z2 57 aa9.83□□□□□ -0.84
PPM1E-201ENST00000308249 USP9YO00507 2555 aaPredicted RBP9.82□□□□□ -0.84
PPM1E-201ENST00000308249 M0QZ58 72 aa9.81□□□□□ -0.84
PPM1E-201ENST00000308249 CHD8Q9HCK8 2581 aa9.8□□□□□ -0.84
PPM1E-201ENST00000308249 KLK9Q2XQG4 91 aa9.8□□□□□ -0.84
PPM1E-201ENST00000308249 ROMO1P60602 79 aa9.78□□□□□ -0.84
PPM1E-201ENST00000308249 Q5W150 140 aa9.77□□□□□ -0.85
PPM1E-201ENST00000308249 MMP24-AS1A0A0U1RRL7 71 aa9.76□□□□□ -0.85
PPM1E-201ENST00000308249 POLQO75417 2590 aa9.76□□□□□ -0.85
PPM1E-201ENST00000308249 WDR87Q6ZQQ6 2873 aa9.75□□□□□ -0.85
PPM1E-201ENST00000308249 FLG2Q5D862 2391 aaPredicted RBP9.75□□□□□ -0.85
PPM1E-201ENST00000308249 RPL37P61927 97 aaKnown RBP9.75□□□□□ -0.85
PPM1E-201ENST00000308249 ANKRD17O75179 2603 aaKnown RBP9.74□□□□□ -0.85
PPM1E-201ENST00000308249 SEC61BP60468 96 aaKnown RBP9.73□□□□□ -0.85
PPM1E-201ENST00000308249 PCNTO95613 3336 aa9.72□□□□□ -0.85
PPM1E-201ENST00000308249 Q5VV11 94 aa9.71□□□□□ -0.86
PPM1E-201ENST00000308249 FP248Q71RG6 208 aaPredicted RBP9.69□□□□□ -0.86
PPM1E-201ENST00000308249 Q5VSD8 79 aa9.68□□□□□ -0.86
PPM1E-201ENST00000308249 SPTBN4Q9H254 2564 aa9.67□□□□□ -0.86
PPM1E-201ENST00000308249 USP24Q9UPU5 2620 aa9.65□□□□□ -0.86
PPM1E-201ENST00000308249 Q5XG85 94 aa9.65□□□□□ -0.87
PPM1E-201ENST00000308249 ADM2Q7Z4H4 148 aa9.64□□□□□ -0.87
PPM1E-201ENST00000308249 SPATA8Q6RVD6 105 aa9.64□□□□□ -0.87
PPM1E-201ENST00000308249 CEP350Q5VT06 3117 aa9.64□□□□□ -0.87
PPM1E-201ENST00000308249 ANKRD11Q6UB99 2663 aaPredicted RBP9.63□□□□□ -0.87
PPM1E-201ENST00000308249 A0A096LNT2 108 aa9.61□□□□□ -0.87
PPM1E-201ENST00000308249 FASNP49327 2511 aaKnown RBP9.6□□□□□ -0.87
PPM1E-201ENST00000308249 PLAC8Q9NZF1 115 aa9.6□□□□□ -0.87
PPM1E-201ENST00000308249 CENPFP49454 3210 aa9.58□□□□□ -0.88
PPM1E-201ENST00000308249 C20orf166-AS1Q96NR2 134 aa9.58□□□□□ -0.88
PPM1E-201ENST00000308249 KRTAP16-1A8MUX0 517 aa9.56□□□□□ -0.88
PPM1E-201ENST00000308249 CYSTM1Q9H1C7 97 aa9.56□□□□□ -0.88
PPM1E-201ENST00000308249 DNAH12Q6ZR08 3092 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms