RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 IGHV4-30-4P0DP06 118 aa10.91□□□□□ -0.66
CCDC8-201ENST00000307522 C9orf66Q5T8R8 295 aa10.91□□□□□ -0.66
CCDC8-201ENST00000307522 Q8IZM0 81 aa10.91□□□□□ -0.66
CCDC8-201ENST00000307522 ANGP03950 147 aaKnown RBP10.9□□□□□ -0.66
CCDC8-201ENST00000307522 STAB2Q8WWQ8 2551 aa10.9□□□□□ -0.66
CCDC8-201ENST00000307522 CXCL6P80162 114 aa10.89□□□□□ -0.67
CCDC8-201ENST00000307522 KIAA0087Q14695 138 aa10.89□□□□□ -0.67
CCDC8-201ENST00000307522 CHCHD10Q8WYQ3 142 aaPredicted RBP10.88□□□□□ -0.67
CCDC8-201ENST00000307522 DEFB105AQ8NG35 78 aa10.88□□□□□ -0.67
CCDC8-201ENST00000307522 NDUFC1O43677 76 aa10.87□□□□□ -0.67
CCDC8-201ENST00000307522 KRTAP10-11P60412 298 aa10.86□□□□□ -0.67
CCDC8-201ENST00000307522 Q6ZTC4 211 aa10.86□□□□□ -0.67
CCDC8-201ENST00000307522 IGKV4-1P06312 121 aa10.84□□□□□ -0.67
CCDC8-201ENST00000307522 LINC00612Q8N6U2 182 aa10.84□□□□□ -0.67
CCDC8-201ENST00000307522 CMC4P56277 68 aaPredicted RBP10.84□□□□□ -0.67
CCDC8-201ENST00000307522 PMAIP1Q13794 54 aa10.83□□□□□ -0.68
CCDC8-201ENST00000307522 SMIM29Q86T20 159 aa10.83□□□□□ -0.68
CCDC8-201ENST00000307522 CSMD3Q7Z407 3707 aa10.82□□□□□ -0.68
CCDC8-201ENST00000307522 Q6ZRP5 223 aa10.82□□□□□ -0.68
CCDC8-201ENST00000307522 OCR1Q9BZK8 76 aa10.82□□□□□ -0.68
CCDC8-201ENST00000307522 BCE1O60756 84 aa10.81□□□□□ -0.68
CCDC8-201ENST00000307522 SPAG11BQ08648 103 aa10.81□□□□□ -0.68
CCDC8-201ENST00000307522 REG3AQ06141 175 aa10.8□□□□□ -0.68
CCDC8-201ENST00000307522 DIRC1Q969H9 104 aa10.8□□□□□ -0.68
CCDC8-201ENST00000307522 C1orf64Q8NEQ6 169 aa10.79□□□□□ -0.68
CCDC8-201ENST00000307522 ATP5EP56381 51 aaPredicted RBP10.79□□□□□ -0.68
CCDC8-201ENST00000307522 ZNF73O43830 326 aaPredicted RBP10.78□□□□□ -0.68
CCDC8-201ENST00000307522 APOC4P55056 127 aa10.77□□□□□ -0.69
CCDC8-201ENST00000307522 PRO0255Q9UI72 69 aa10.77□□□□□ -0.69
CCDC8-201ENST00000307522 COX7BP24311 80 aa10.77□□□□□ -0.69
CCDC8-201ENST00000307522 DEFB116Q30KQ4 102 aa10.77□□□□□ -0.69
CCDC8-201ENST00000307522 IGLV6-57P01721 117 aa10.76□□□□□ -0.69
CCDC8-201ENST00000307522 HIGD2BQ4VC39 106 aa10.75□□□□□ -0.69
CCDC8-201ENST00000307522 Q8NAQ8 132 aa10.75□□□□□ -0.69
CCDC8-201ENST00000307522 A8MUN3 132 aa10.75□□□□□ -0.69
CCDC8-201ENST00000307522 hDV103S1A0JD37 113 aa10.73□□□□□ -0.69
CCDC8-201ENST00000307522 COX17Q14061 63 aa10.73□□□□□ -0.69
CCDC8-201ENST00000307522 PDE6GP18545 87 aa10.72□□□□□ -0.69
CCDC8-201ENST00000307522 COL7A1Q02388 2944 aa10.72□□□□□ -0.69
CCDC8-201ENST00000307522 TRAV22A0A0B4J277 110 aa10.71□□□□□ -0.69
CCDC8-201ENST00000307522 SPART-AS1P0CW21 52 aa10.7□□□□□ -0.7
CCDC8-201ENST00000307522 A0A0G2JQZ4 141 aa10.7□□□□□ -0.7
CCDC8-201ENST00000307522 A0A0J9YWU9 116 aa10.7□□□□□ -0.7
CCDC8-201ENST00000307522 A0A1W2PNN7 141 aa10.7□□□□□ -0.7
CCDC8-201ENST00000307522 ST20-AS1Q8NBB2 130 aa10.69□□□□□ -0.7
CCDC8-201ENST00000307522 C6orf48Q9UBA6 75 aa10.69□□□□□ -0.7
CCDC8-201ENST00000307522 A0A1B0GUV1 79 aa10.68□□□□□ -0.7
CCDC8-201ENST00000307522 SPTSSBQ8NFR3 76 aa10.68□□□□□ -0.7
CCDC8-201ENST00000307522 PRR15Q8IV56 129 aa10.67□□□□□ -0.7
CCDC8-201ENST00000307522 CMYA5Q8N3K9 4069 aa10.67□□□□□ -0.7
CCDC8-201ENST00000307522 LYSTQ99698 3801 aa10.66□□□□□ -0.7
CCDC8-201ENST00000307522 ELOF1P60002 83 aaKnown RBP10.65□□□□□ -0.7
CCDC8-201ENST00000307522 WFDC10BQ8IUB3 73 aa10.65□□□□□ -0.7
CCDC8-201ENST00000307522 LYRM9A8MSI8 78 aa10.65□□□□□ -0.71
CCDC8-201ENST00000307522 SRRM2Q9UQ35 2752 aaKnown RBP10.64□□□□□ -0.71
CCDC8-201ENST00000307522 ERC2-IT1O76042 136 aa10.63□□□□□ -0.71
CCDC8-201ENST00000307522 KPRPQ5T749 579 aaPredicted RBP10.62□□□□□ -0.71
CCDC8-201ENST00000307522 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.61□□□□□ -0.71
CCDC8-201ENST00000307522 K7EQZ3 153 aa10.61□□□□□ -0.71
CCDC8-201ENST00000307522 Q6ZRU5 148 aa10.6□□□□□ -0.71
CCDC8-201ENST00000307522 WFDC13Q8IUB5 93 aa10.59□□□□□ -0.71
CCDC8-201ENST00000307522 CAMK2N2Q96S95 79 aa10.58□□□□□ -0.72
CCDC8-201ENST00000307522 MDFIQ99750 246 aa10.58□□□□□ -0.72
CCDC8-201ENST00000307522 CHKB-CPT1BH3BT56 60 aa10.58□□□□□ -0.72
CCDC8-201ENST00000307522 SYCNQ0VAF6 134 aa10.58□□□□□ -0.72
CCDC8-201ENST00000307522 Q1T7F1 81 aa10.58□□□□□ -0.72
CCDC8-201ENST00000307522 TGP01266 2768 aa10.57□□□□□ -0.72
CCDC8-201ENST00000307522 RPL37AP8A6NKH3 93 aa10.57□□□□□ -0.72
CCDC8-201ENST00000307522 LINC00528Q8N1L1 170 aa10.57□□□□□ -0.72
CCDC8-201ENST00000307522 VPREB1P12018 145 aa10.56□□□□□ -0.72
CCDC8-201ENST00000307522 DEFB131BA0A096LNP1 70 aa10.56□□□□□ -0.72
CCDC8-201ENST00000307522 A0A1W2PNM2 257 aa10.55□□□□□ -0.72
CCDC8-201ENST00000307522 PSCAO43653 123 aa10.55□□□□□ -0.72
CCDC8-201ENST00000307522 Q8N377 158 aa10.55□□□□□ -0.72
CCDC8-201ENST00000307522 C11orf45Q8TAV5 145 aa10.55□□□□□ -0.72
CCDC8-201ENST00000307522 M0R378 163 aa10.52□□□□□ -0.72
CCDC8-201ENST00000307522 ETDCA0A1B0GVM5 59 aa10.51□□□□□ -0.73
CCDC8-201ENST00000307522 Q5VV11 94 aa10.51□□□□□ -0.73
CCDC8-201ENST00000307522 PRR15LQ9BU68 103 aa10.51□□□□□ -0.73
CCDC8-201ENST00000307522 DSCR10P59022 87 aa10.51□□□□□ -0.73
CCDC8-201ENST00000307522 LINC00208Q96KT6 92 aa10.5□□□□□ -0.73
CCDC8-201ENST00000307522 IGKV2D-24A0A075B6R9 120 aa10.5□□□□□ -0.73
CCDC8-201ENST00000307522 K7EIL1 84 aa10.49□□□□□ -0.73
CCDC8-201ENST00000307522 C1orf137Q5JT78 98 aa10.49□□□□□ -0.73
CCDC8-201ENST00000307522 LELP1Q5T871 98 aa10.48□□□□□ -0.73
CCDC8-201ENST00000307522 C16orf90A8MZG2 172 aa10.48□□□□□ -0.73
CCDC8-201ENST00000307522 RPL37AP61513 92 aaKnown RBP10.48□□□□□ -0.73
CCDC8-201ENST00000307522 MRPL55Q7Z7F7 128 aaKnown RBP10.48□□□□□ -0.73
CCDC8-201ENST00000307522 RBM12B-AS1Q9P1G2 102 aa10.47□□□□□ -0.73
CCDC8-201ENST00000307522 CD164Q04900 197 aa10.46□□□□□ -0.73
CCDC8-201ENST00000307522 SERTAD4-AS1Q5TG53 156 aa10.46□□□□□ -0.73
CCDC8-201ENST00000307522 ZCCHC13Q8WW36 166 aaKnown RBP10.46□□□□□ -0.73
CCDC8-201ENST00000307522 HUWE1Q7Z6Z7 4374 aaKnown RBP10.46□□□□□ -0.73
CCDC8-201ENST00000307522 H3BQ85 93 aa10.45□□□□□ -0.74
CCDC8-201ENST00000307522 FAM168BA1KXE4 195 aa10.45□□□□□ -0.74
CCDC8-201ENST00000307522 EGFEM1PQ0D2K5 195 aa10.45□□□□□ -0.74
CCDC8-201ENST00000307522 CASC10Q5T4H9 136 aa10.44□□□□□ -0.74
CCDC8-201ENST00000307522 HCG22E2RYF7 251 aa10.43□□□□□ -0.74
CCDC8-201ENST00000307522 DNHD1Q96M86 4753 aa10.43□□□□□ -0.74
CCDC8-201ENST00000307522 NKAPP1Q8N9T2 125 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms