RNA–Protein interactions for RNA: ENST00000307216.10

TMEM87A-201, Transcript of transmembrane protein 87A, humanhuman

TSL 1 (best) BASIC

Gene TMEM87A, Length 1,598 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-201ENST00000307216 C14orf177Q52M58 125 aa9.24□□□□□ -0.93
TMEM87A-201ENST00000307216 PKIGQ9Y2B9 76 aa9.24□□□□□ -0.93
TMEM87A-201ENST00000307216 SERTAD4-AS1Q5TG53 156 aa9.24□□□□□ -0.93
TMEM87A-201ENST00000307216 KRTAP4-8Q9BYQ9 185 aa9.24□□□□□ -0.93
TMEM87A-201ENST00000307216 TENM3Q9P273 2699 aa9.23□□□□□ -0.93
TMEM87A-201ENST00000307216 IGKV3D-7A0A0C4DH55 119 aa9.23□□□□□ -0.93
TMEM87A-201ENST00000307216 UBE2DNLQ8IWF7 75 aa9.23□□□□□ -0.93
TMEM87A-201ENST00000307216 IGLV1-50A0A075B6I6 118 aa9.22□□□□□ -0.93
TMEM87A-201ENST00000307216 FLNBO75369 2602 aaKnown RBP9.22□□□□□ -0.93
TMEM87A-201ENST00000307216 SPRR1AP35321 89 aa9.22□□□□□ -0.93
TMEM87A-201ENST00000307216 UQCRQO14949 82 aa9.21□□□□□ -0.93
TMEM87A-201ENST00000307216 CNBPP62633 177 aaKnown RBP9.21□□□□□ -0.93
TMEM87A-201ENST00000307216 Q6ZRX8 168 aa9.21□□□□□ -0.93
TMEM87A-201ENST00000307216 PKD1L1Q8TDX9 2849 aa9.21□□□□□ -0.93
TMEM87A-201ENST00000307216 ETDCA0A1B0GVM5 59 aa9.2□□□□□ -0.94
TMEM87A-201ENST00000307216 A0A1B0GW54 56 aa9.2□□□□□ -0.94
TMEM87A-201ENST00000307216 CCDC179H3BU77 68 aa9.2□□□□□ -0.94
TMEM87A-201ENST00000307216 CASC10Q5T4H9 136 aa9.2□□□□□ -0.94
TMEM87A-201ENST00000307216 APLNQ9ULZ1 77 aa9.2□□□□□ -0.94
TMEM87A-201ENST00000307216 MRPL55Q7Z7F7 128 aaKnown RBP9.2□□□□□ -0.94
TMEM87A-201ENST00000307216 PSCAO43653 123 aa9.19□□□□□ -0.94
TMEM87A-201ENST00000307216 CXCL6P80162 114 aa9.19□□□□□ -0.94
TMEM87A-201ENST00000307216 C3orf22Q8N5N4 141 aa9.19□□□□□ -0.94
TMEM87A-201ENST00000307216 NUPR2A6NF83 97 aa9.18□□□□□ -0.94
TMEM87A-201ENST00000307216 B5MCH6 92 aa9.18□□□□□ -0.94
TMEM87A-201ENST00000307216 KRTAP4-16G5E9R7 235 aaPredicted RBP9.18□□□□□ -0.94
TMEM87A-201ENST00000307216 BCE1O60756 84 aa9.17□□□□□ -0.94
TMEM87A-201ENST00000307216 COX7CP15954 63 aa9.17□□□□□ -0.94
TMEM87A-201ENST00000307216 C16orf90A8MZG2 172 aa9.16□□□□□ -0.94
TMEM87A-201ENST00000307216 Q6ZVQ6 151 aa9.16□□□□□ -0.94
TMEM87A-201ENST00000307216 IGLV5-48A0A075B6I7 105 aa9.14□□□□□ -0.95
TMEM87A-201ENST00000307216 ANK2Q01484 3957 aa9.13□□□□□ -0.95
TMEM87A-201ENST00000307216 RPL37AP8A6NKH3 93 aa9.13□□□□□ -0.95
TMEM87A-201ENST00000307216 LINC01547P58512 204 aaPredicted RBP9.13□□□□□ -0.95
TMEM87A-201ENST00000307216 C9orf153Q5TBE3 101 aa9.13□□□□□ -0.95
TMEM87A-201ENST00000307216 REG3GQ6UW15 175 aa9.13□□□□□ -0.95
TMEM87A-201ENST00000307216 FAM19A5Q7Z5A7 132 aaPredicted RBP9.13□□□□□ -0.95
TMEM87A-201ENST00000307216 SERP2Q8N6R1 65 aa9.13□□□□□ -0.95
TMEM87A-201ENST00000307216 FAM168BA1KXE4 195 aa9.12□□□□□ -0.95
TMEM87A-201ENST00000307216 Q8N377 158 aa9.12□□□□□ -0.95
TMEM87A-201ENST00000307216 HAMPP81172 84 aa9.12□□□□□ -0.95
TMEM87A-201ENST00000307216 SMIM20Q8N5G0 67 aa9.12□□□□□ -0.95
TMEM87A-201ENST00000307216 KRTAP1-5Q9BYS1 174 aa9.12□□□□□ -0.95
TMEM87A-201ENST00000307216 COL6A5A8TX70 2615 aa9.11□□□□□ -0.95
TMEM87A-201ENST00000307216 A0A087WVE0 104 aa9.11□□□□□ -0.95
TMEM87A-201ENST00000307216 KRTAP7-1Q8IUC3 87 aa9.11□□□□□ -0.95
TMEM87A-201ENST00000307216 MDFIQ99750 246 aa9.11□□□□□ -0.95
TMEM87A-201ENST00000307216 CRYGAP11844 174 aa9.1□□□□□ -0.95
TMEM87A-201ENST00000307216 Q9BRP9 147 aa9.1□□□□□ -0.95
TMEM87A-201ENST00000307216 M0R2N4 97 aa9.09□□□□□ -0.95
TMEM87A-201ENST00000307216 FUSP35637 526 aaKnown RBP eCLIP9.09□□□□□ -0.95
TMEM87A-201ENST00000307216 NOTCH1P46531 2555 aa9.09□□□□□ -0.95
TMEM87A-201ENST00000307216 UBE2BP63146 152 aa9.08□□□□□ -0.96
TMEM87A-201ENST00000307216 LINC00474Q9P2X8 69 aa9.08□□□□□ -0.96
TMEM87A-201ENST00000307216 A0A096LNI7 61 aa9.07□□□□□ -0.96
TMEM87A-201ENST00000307216 NBDYA0A0U1RRE5 68 aa9.07□□□□□ -0.96
TMEM87A-201ENST00000307216 DEFB105AQ8NG35 78 aa9.07□□□□□ -0.96
TMEM87A-201ENST00000307216 HUWE1Q7Z6Z7 4374 aaKnown RBP9.07□□□□□ -0.96
TMEM87A-201ENST00000307216 FAM19A1Q7Z5A9 133 aa9.07□□□□□ -0.96
TMEM87A-201ENST00000307216 KRTAP9-2Q9BYQ4 174 aa9.06□□□□□ -0.96
TMEM87A-201ENST00000307216 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.05□□□□□ -0.96
TMEM87A-201ENST00000307216 TNP2Q05952 138 aa9.05□□□□□ -0.96
TMEM87A-201ENST00000307216 NREPQ16612 68 aa9.05□□□□□ -0.96
TMEM87A-201ENST00000307216 SS18L2Q9UHA2 77 aa9.05□□□□□ -0.96
TMEM87A-201ENST00000307216 C9orf163Q8N9P6 203 aa9.04□□□□□ -0.96
TMEM87A-201ENST00000307216 F8WEM9 126 aa9.03□□□□□ -0.96
TMEM87A-201ENST00000307216 H0Y9J4 135 aa9.03□□□□□ -0.96
TMEM87A-201ENST00000307216 NBEAL1Q6ZS30 2694 aa9.03□□□□□ -0.96
TMEM87A-201ENST00000307216 C1orf137Q5JT78 98 aa9.03□□□□□ -0.96
TMEM87A-201ENST00000307216 IGKV2-24A0A0C4DH68 120 aa9.02□□□□□ -0.97
TMEM87A-201ENST00000307216 TRAV7A0A075B6U4 112 aa9.01□□□□□ -0.97
TMEM87A-201ENST00000307216 KRTAP9-6A0A140TA67 174 aa9.01□□□□□ -0.97
TMEM87A-201ENST00000307216 LRCOL1A6NCL2 159 aa9.01□□□□□ -0.97
TMEM87A-201ENST00000307216 Q8NBF4 154 aa9.01□□□□□ -0.97
TMEM87A-201ENST00000307216 SPRR4Q96PI1 79 aa9□□□□□ -0.97
TMEM87A-201ENST00000307216 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.99□□□□□ -0.97
TMEM87A-201ENST00000307216 A0A1W2PNN7 141 aa8.99□□□□□ -0.97
TMEM87A-201ENST00000307216 DNAH1Q9P2D7 4330 aa8.99□□□□□ -0.97
TMEM87A-201ENST00000307216 BPY2O14599 106 aa8.99□□□□□ -0.97
TMEM87A-201ENST00000307216 Q6ZRN7 208 aaPredicted RBP8.99□□□□□ -0.97
TMEM87A-201ENST00000307216 ST20-AS1Q8NBB2 130 aa8.99□□□□□ -0.97
TMEM87A-201ENST00000307216 ERC2-IT1O76042 136 aa8.98□□□□□ -0.97
TMEM87A-201ENST00000307216 IGLV8-61A0A075B6I0 122 aa8.97□□□□□ -0.97
TMEM87A-201ENST00000307216 TMEM258P61165 79 aa8.97□□□□□ -0.97
TMEM87A-201ENST00000307216 A0A1W2PNM2 257 aa8.96□□□□□ -0.97
TMEM87A-201ENST00000307216 MGAM2Q2M2H8 2515 aa8.95□□□□□ -0.98
TMEM87A-201ENST00000307216 C3orf84H3BNL1 204 aa8.95□□□□□ -0.98
TMEM87A-201ENST00000307216 SMIM29Q86T20 159 aa8.95□□□□□ -0.98
TMEM87A-201ENST00000307216 SPRR1BP22528 89 aa8.94□□□□□ -0.98
TMEM87A-201ENST00000307216 IGKV4-1P06312 121 aa8.92□□□□□ -0.98
TMEM87A-201ENST00000307216 PRLHP81277 87 aa8.92□□□□□ -0.98
TMEM87A-201ENST00000307216 SCXQ7RTU7 201 aa8.92□□□□□ -0.98
TMEM87A-201ENST00000307216 LINC00476Q8WZB0 136 aa8.92□□□□□ -0.98
TMEM87A-201ENST00000307216 HIGD2AQ9BW72 106 aa8.92□□□□□ -0.98
TMEM87A-201ENST00000307216 PHF5AQ7RTV0 110 aaKnown RBP8.91□□□□□ -0.98
TMEM87A-201ENST00000307216 EPM2AB3EWF7 344 aa8.9□□□□□ -0.98
TMEM87A-201ENST00000307216 UBE2AP49459 152 aa8.9□□□□□ -0.98
TMEM87A-201ENST00000307216 DYNC2H1Q8NCM8 4307 aaKnown RBP8.9□□□□□ -0.98
TMEM87A-201ENST00000307216 CHTF8P0CG12 524 aa8.9□□□□□ -0.99
TMEM87A-201ENST00000307216 DNAH9Q9NYC9 4486 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms