RNA–Protein interactions for RNA: ENST00000304623.12

CTNND2-201, Transcript of catenin delta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND2, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-201ENST00000304623 CRIPTQ9P021 101 aa13.01□□□□□ -0.33
CTNND2-201ENST00000304623 GIG44P09565 113 aaPredicted RBP12.99□□□□□ -0.33
CTNND2-201ENST00000304623 SPANXA2-OT1Q8N9U9 137 aa12.98□□□□□ -0.33
CTNND2-201ENST00000304623 KTN1-AS1Q86SY8 53 aa12.97□□□□□ -0.33
CTNND2-201ENST00000304623 C19orf73Q9NVV2 129 aa12.96□□□□□ -0.33
CTNND2-201ENST00000304623 F8P00451 2351 aa12.95□□□□□ -0.34
CTNND2-201ENST00000304623 WWC2-AS2Q96NR7 200 aa12.95□□□□□ -0.34
CTNND2-201ENST00000304623 APLNQ9ULZ1 77 aa12.95□□□□□ -0.34
CTNND2-201ENST00000304623 PCSK5Q92824 1860 aa12.93□□□□□ -0.34
CTNND2-201ENST00000304623 LINC00304Q8N9R0 145 aa12.93□□□□□ -0.34
CTNND2-201ENST00000304623 LCA10Q71F78 164 aa12.93□□□□□ -0.34
CTNND2-201ENST00000304623 OBSCN-AS1Q96MR7 158 aa12.93□□□□□ -0.34
CTNND2-201ENST00000304623 A0A0G2JQZ4 141 aa12.92□□□□□ -0.34
CTNND2-201ENST00000304623 A0A1W2PNN7 141 aa12.92□□□□□ -0.34
CTNND2-201ENST00000304623 A0A1W2PNM2 257 aa12.92□□□□□ -0.34
CTNND2-201ENST00000304623 C9orf163Q8N9P6 203 aa12.92□□□□□ -0.34
CTNND2-201ENST00000304623 KRTAP10-11P60412 298 aa12.89□□□□□ -0.35
CTNND2-201ENST00000304623 ANKRD17O75179 2603 aaKnown RBP12.87□□□□□ -0.35
CTNND2-201ENST00000304623 K7EIL1 84 aa12.85□□□□□ -0.35
CTNND2-201ENST00000304623 A0A087WTM6 91 aa12.85□□□□□ -0.35
CTNND2-201ENST00000304623 SPTBN4Q9H254 2564 aa12.85□□□□□ -0.35
CTNND2-201ENST00000304623 SRCAPQ6ZRS2 3230 aa12.84□□□□□ -0.35
CTNND2-201ENST00000304623 IGLV5-48A0A075B6I7 105 aa12.84□□□□□ -0.35
CTNND2-201ENST00000304623 A0A096LNT2 108 aa12.84□□□□□ -0.35
CTNND2-201ENST00000304623 CDC42SE1Q9NRR8 79 aa12.84□□□□□ -0.35
CTNND2-201ENST00000304623 SPRR4Q96PI1 79 aa12.84□□□□□ -0.35
CTNND2-201ENST00000304623 FAM104AQ969W3 186 aa12.82□□□□□ -0.36
CTNND2-201ENST00000304623 POLQO75417 2590 aa12.82□□□□□ -0.36
CTNND2-201ENST00000304623 CHD8Q9HCK8 2581 aa12.82□□□□□ -0.36
CTNND2-201ENST00000304623 IGLV7-43P04211 117 aa12.81□□□□□ -0.36
CTNND2-201ENST00000304623 CNBPP62633 177 aaKnown RBP12.8□□□□□ -0.36
CTNND2-201ENST00000304623 C9orf92A6NGG3 77 aa12.8□□□□□ -0.36
CTNND2-201ENST00000304623 IGLV5-37A0A075B6J1 123 aa12.79□□□□□ -0.36
CTNND2-201ENST00000304623 ACANP16112 2415 aa12.78□□□□□ -0.36
CTNND2-201ENST00000304623 ANAPC11Q9NYG5 84 aa12.77□□□□□ -0.37
CTNND2-201ENST00000304623 PSORS1C2Q9UIG4 136 aa12.76□□□□□ -0.37
CTNND2-201ENST00000304623 COX6B2Q6YFQ2 88 aa12.76□□□□□ -0.37
CTNND2-201ENST00000304623 OCR1Q9BZK8 76 aa12.76□□□□□ -0.37
CTNND2-201ENST00000304623 KRTAP10-3P60369 221 aa12.75□□□□□ -0.37
CTNND2-201ENST00000304623 Q1T7F1 81 aa12.74□□□□□ -0.37
CTNND2-201ENST00000304623 J3QL48 77 aa12.73□□□□□ -0.37
CTNND2-201ENST00000304623 CASC10Q5T4H9 136 aa12.71□□□□□ -0.37
CTNND2-201ENST00000304623 ZNF575Q86XF7 245 aa12.69□□□□□ -0.38
CTNND2-201ENST00000304623 CENPFP49454 3210 aa12.67□□□□□ -0.38
CTNND2-201ENST00000304623 Q8N1X5 172 aa12.66□□□□□ -0.38
CTNND2-201ENST00000304623 RBM12B-AS1Q9P1G2 102 aa12.65□□□□□ -0.38
CTNND2-201ENST00000304623 WIPF1O43516 503 aa12.64□□□□□ -0.39
CTNND2-201ENST00000304623 PRR26Q8N8Z3 221 aa12.62□□□□□ -0.39
CTNND2-201ENST00000304623 A0A0D9SG42 100 aa12.61□□□□□ -0.39
CTNND2-201ENST00000304623 FASNP49327 2511 aaKnown RBP12.61□□□□□ -0.39
CTNND2-201ENST00000304623 IGLV7-46A0A075B6I9 117 aa12.61□□□□□ -0.39
CTNND2-201ENST00000304623 SMR3BP02814 79 aaPredicted RBP12.58□□□□□ -0.4
CTNND2-201ENST00000304623 Q75L30 129 aa12.55□□□□□ -0.4
CTNND2-201ENST00000304623 LINC01554Q52M75 96 aa12.53□□□□□ -0.4
CTNND2-201ENST00000304623 EP400Q96L91 3159 aa12.5□□□□□ -0.41
CTNND2-201ENST00000304623 HRES1P13985 223 aa12.47□□□□□ -0.41
CTNND2-201ENST00000304623 LUZP6Q538Z0 58 aa12.47□□□□□ -0.41
CTNND2-201ENST00000304623 KRTAP1-3Q8IUG1 177 aa12.46□□□□□ -0.42
CTNND2-201ENST00000304623 A0A1B0GU33 70 aa12.45□□□□□ -0.42
CTNND2-201ENST00000304623 LINC01558Q9Y6Z2 57 aa12.45□□□□□ -0.42
CTNND2-201ENST00000304623 CR1P17927 2039 aa12.41□□□□□ -0.42
CTNND2-201ENST00000304623 Q5XG85 94 aa12.41□□□□□ -0.42
CTNND2-201ENST00000304623 Q8N9P0 234 aaPredicted RBP12.41□□□□□ -0.42
CTNND2-201ENST00000304623 KRTAP1-1Q07627 177 aa12.4□□□□□ -0.42
CTNND2-201ENST00000304623 MMP24-AS1A0A0U1RRL7 71 aa12.4□□□□□ -0.42
CTNND2-201ENST00000304623 FAM229BQ4G0N7 80 aa12.36□□□□□ -0.43
CTNND2-201ENST00000304623 SPRR1AP35321 89 aa12.34□□□□□ -0.43
CTNND2-201ENST00000304623 FP248Q71RG6 208 aaPredicted RBP12.34□□□□□ -0.43
CTNND2-201ENST00000304623 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.33□□□□□ -0.44
CTNND2-201ENST00000304623 USP24Q9UPU5 2620 aa12.33□□□□□ -0.44
CTNND2-201ENST00000304623 Q6ZSA8 131 aa12.3□□□□□ -0.44
CTNND2-201ENST00000304623 TNP2Q05952 138 aa12.3□□□□□ -0.44
CTNND2-201ENST00000304623 CYSTM1Q9H1C7 97 aa12.29□□□□□ -0.44
CTNND2-201ENST00000304623 Q8NDZ9 215 aa12.27□□□□□ -0.44
CTNND2-201ENST00000304623 ZCCHC13Q8WW36 166 aaKnown RBP12.27□□□□□ -0.45
CTNND2-201ENST00000304623 MGAM2Q2M2H8 2515 aa12.26□□□□□ -0.45
CTNND2-201ENST00000304623 EPG5Q9HCE0 2579 aa12.26□□□□□ -0.45
CTNND2-201ENST00000304623 DMAC1Q96GE9 116 aa12.26□□□□□ -0.45
CTNND2-201ENST00000304623 Q5VV11 94 aa12.25□□□□□ -0.45
CTNND2-201ENST00000304623 CAMK2N1Q7Z7J9 78 aa12.25□□□□□ -0.45
CTNND2-201ENST00000304623 SPRR1BP22528 89 aa12.24□□□□□ -0.45
CTNND2-201ENST00000304623 LINC00472Q9H8W2 130 aa12.22□□□□□ -0.45
CTNND2-201ENST00000304623 PLAC8Q9NZF1 115 aa12.22□□□□□ -0.45
CTNND2-201ENST00000304623 LINC00483Q53H64 154 aa12.21□□□□□ -0.45
CTNND2-201ENST00000304623 Q5W150 140 aa12.18□□□□□ -0.46
CTNND2-201ENST00000304623 PRAC1Q96KF2 57 aa12.18□□□□□ -0.46
CTNND2-201ENST00000304623 CSAG1Q6PB30 78 aa12.13□□□□□ -0.47
CTNND2-201ENST00000304623 SPINK7P58062 85 aa12.13□□□□□ -0.47
CTNND2-201ENST00000304623 S4R3F8 94 aa12.1□□□□□ -0.47
CTNND2-201ENST00000304623 HECTD1Q9ULT8 2610 aa12.09□□□□□ -0.47
CTNND2-201ENST00000304623 PRRC2CQ9Y520 2896 aaKnown RBP12.07□□□□□ -0.48
CTNND2-201ENST00000304623 FLNBO75369 2602 aaKnown RBP12.06□□□□□ -0.48
CTNND2-201ENST00000304623 BPTFQ12830 3046 aa12.05□□□□□ -0.48
CTNND2-201ENST00000304623 H3BS24 57 aa12.02□□□□□ -0.49
CTNND2-201ENST00000304623 OXTP01178 125 aa12.01□□□□□ -0.49
CTNND2-201ENST00000304623 KRTAP26-1Q6PEX3 210 aa11.99□□□□□ -0.49
CTNND2-201ENST00000304623 A0A0A0MQY5 61 aa11.97□□□□□ -0.49
CTNND2-201ENST00000304623 FLNAP21333 2647 aaKnown RBP11.96□□□□□ -0.49
CTNND2-201ENST00000304623 RPL37P61927 97 aaKnown RBP11.92□□□□□ -0.5
CTNND2-201ENST00000304623 R4GN34 69 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms