RNA–Protein interactions for RNA: ENST00000299705.9

TMED3-201, Transcript of transmembrane p24 trafficking protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED3, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-201ENST00000299705 CFC1P0CG37 223 aa11.05□□□□□ -0.64
TMED3-201ENST00000299705 KRTAP4-16G5E9R7 235 aaPredicted RBP11.03□□□□□ -0.64
TMED3-201ENST00000299705 ZNF73O43830 326 aaPredicted RBP11.02□□□□□ -0.65
TMED3-201ENST00000299705 VPS13BQ7Z7G8 4022 aa11.01□□□□□ -0.65
TMED3-201ENST00000299705 BVES-AS1Q5T3Y7 98 aa11.01□□□□□ -0.65
TMED3-201ENST00000299705 RAB37Q96AX2 223 aa11.01□□□□□ -0.65
TMED3-201ENST00000299705 FAM19A1Q7Z5A9 133 aa11□□□□□ -0.65
TMED3-201ENST00000299705 ETDCA0A1B0GVM5 59 aa11□□□□□ -0.65
TMED3-201ENST00000299705 H0Y9J4 135 aa11□□□□□ -0.65
TMED3-201ENST00000299705 M0R143 59 aa11□□□□□ -0.65
TMED3-201ENST00000299705 ZNF861PO60384 105 aa11□□□□□ -0.65
TMED3-201ENST00000299705 KRTAP13-1Q8IUC0 172 aa11□□□□□ -0.65
TMED3-201ENST00000299705 A0A1B0GWB2 263 aa10.99□□□□□ -0.65
TMED3-201ENST00000299705 RPL13AP40429 203 aaKnown RBP10.99□□□□□ -0.65
TMED3-201ENST00000299705 RPL28P46779 137 aaKnown RBP10.99□□□□□ -0.65
TMED3-201ENST00000299705 UBE2AP49459 152 aa10.99□□□□□ -0.65
TMED3-201ENST00000299705 DIRC1Q969H9 104 aa10.99□□□□□ -0.65
TMED3-201ENST00000299705 KRTAP4-5Q9BYR2 181 aa10.99□□□□□ -0.65
TMED3-201ENST00000299705 NHP2Q9NX24 153 aaKnown RBP10.99□□□□□ -0.65
TMED3-201ENST00000299705 SMIM11BQ8TCY0 68 aa10.98□□□□□ -0.65
TMED3-201ENST00000299705 PRO1854Q9UHT4 67 aa10.98□□□□□ -0.65
TMED3-201ENST00000299705 B5MCH6 92 aa10.97□□□□□ -0.65
TMED3-201ENST00000299705 HINT1P49773 126 aaPredicted RBP10.97□□□□□ -0.65
TMED3-201ENST00000299705 SPINK6Q6UWN8 80 aa10.97□□□□□ -0.65
TMED3-201ENST00000299705 TRBV7-6A0A0J9YX20 115 aa10.96□□□□□ -0.65
TMED3-201ENST00000299705 PRLHP81277 87 aa10.96□□□□□ -0.65
TMED3-201ENST00000299705 C6orf99Q4VX62 202 aa10.96□□□□□ -0.65
TMED3-201ENST00000299705 SRRM2Q9UQ35 2752 aaKnown RBP10.96□□□□□ -0.66
TMED3-201ENST00000299705 PCP4L1A6NKN8 68 aa10.95□□□□□ -0.66
TMED3-201ENST00000299705 Q6ZRX8 168 aa10.95□□□□□ -0.66
TMED3-201ENST00000299705 ELOF1P60002 83 aaKnown RBP10.93□□□□□ -0.66
TMED3-201ENST00000299705 H7C2G1 150 aa10.92□□□□□ -0.66
TMED3-201ENST00000299705 COX7BP24311 80 aa10.92□□□□□ -0.66
TMED3-201ENST00000299705 K7ERJ3 54 aa10.91□□□□□ -0.66
TMED3-201ENST00000299705 PCLOQ9Y6V0 5065 aa10.91□□□□□ -0.66
TMED3-201ENST00000299705 INAFM2P0DMQ5 153 aa10.9□□□□□ -0.66
TMED3-201ENST00000299705 VAMP3Q15836 100 aa10.9□□□□□ -0.66
TMED3-201ENST00000299705 Q1RN00 199 aa10.89□□□□□ -0.67
TMED3-201ENST00000299705 SMCR5Q8TEV8 140 aa10.89□□□□□ -0.67
TMED3-201ENST00000299705 Q9BRP9 147 aa10.89□□□□□ -0.67
TMED3-201ENST00000299705 HIGD2AQ9BW72 106 aa10.89□□□□□ -0.67
TMED3-201ENST00000299705 DHRS4-AS1Q9P1J3 65 aa10.87□□□□□ -0.67
TMED3-201ENST00000299705 ABCA13Q86UQ4 5058 aa10.87□□□□□ -0.67
TMED3-201ENST00000299705 TSPAN13O95857 204 aa10.85□□□□□ -0.67
TMED3-201ENST00000299705 BATFQ16520 125 aa10.85□□□□□ -0.67
TMED3-201ENST00000299705 H0YGX0 51 aa10.83□□□□□ -0.68
TMED3-201ENST00000299705 ERC2-IT1O76042 136 aa10.82□□□□□ -0.68
TMED3-201ENST00000299705 LINC00575Q6W349 94 aa10.82□□□□□ -0.68
TMED3-201ENST00000299705 TRIAP1O43715 76 aa10.81□□□□□ -0.68
TMED3-201ENST00000299705 ZNF706Q9Y5V0 76 aaPredicted RBP10.81□□□□□ -0.68
TMED3-201ENST00000299705 PKHD1L1Q86WI1 4243 aa10.81□□□□□ -0.68
TMED3-201ENST00000299705 PSMB2P49721 201 aa10.81□□□□□ -0.68
TMED3-201ENST00000299705 SLC25A20O43772 301 aa10.8□□□□□ -0.68
TMED3-201ENST00000299705 KRTAP1-4P0C5Y4 121 aa10.8□□□□□ -0.68
TMED3-201ENST00000299705 SNHG12Q9BXW3 62 aa10.8□□□□□ -0.68
TMED3-201ENST00000299705 COX6CP09669 75 aa10.79□□□□□ -0.68
TMED3-201ENST00000299705 SPRR4Q96PI1 79 aa10.79□□□□□ -0.68
TMED3-201ENST00000299705 hADV29S1A0JD25 119 aa10.77□□□□□ -0.69
TMED3-201ENST00000299705 SNCGO76070 127 aa10.75□□□□□ -0.69
TMED3-201ENST00000299705 OXTP01178 125 aa10.75□□□□□ -0.69
TMED3-201ENST00000299705 LINC01600Q96MT4 127 aa10.75□□□□□ -0.69
TMED3-201ENST00000299705 A0A1B0GX51 115 aa10.74□□□□□ -0.69
TMED3-201ENST00000299705 LINC00483Q53H64 154 aa10.74□□□□□ -0.69
TMED3-201ENST00000299705 FAM229BQ4G0N7 80 aa10.74□□□□□ -0.69
TMED3-201ENST00000299705 ST20-AS1Q8NBB2 130 aa10.74□□□□□ -0.69
TMED3-201ENST00000299705 FAM218AQ96MZ4 157 aa10.74□□□□□ -0.69
TMED3-201ENST00000299705 GAGE2AQ6NT46 116 aa10.73□□□□□ -0.69
TMED3-201ENST00000299705 FLG2Q5D862 2391 aaPredicted RBP10.72□□□□□ -0.69
TMED3-201ENST00000299705 KRTAP29-1A8MX34 341 aaPredicted RBP10.72□□□□□ -0.69
TMED3-201ENST00000299705 TAX1BP3O14907 124 aa10.72□□□□□ -0.69
TMED3-201ENST00000299705 SCGB1C2P0DMR2 95 aa10.72□□□□□ -0.69
TMED3-201ENST00000299705 SPRR1BP22528 89 aa10.71□□□□□ -0.69
TMED3-201ENST00000299705 COL5A1-AS1Q5SY13 56 aa10.71□□□□□ -0.69
TMED3-201ENST00000299705 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.71□□□□□ -0.69
TMED3-201ENST00000299705 ANAPC11Q9NYG5 84 aa10.71□□□□□ -0.69
TMED3-201ENST00000299705 IGLV5-48A0A075B6I7 105 aa10.7□□□□□ -0.7
TMED3-201ENST00000299705 C9orf118A6NHY6 69 aa10.7□□□□□ -0.7
TMED3-201ENST00000299705 CLEC2BQ92478 149 aa10.7□□□□□ -0.7
TMED3-201ENST00000299705 CRYGAP11844 174 aa10.69□□□□□ -0.7
TMED3-201ENST00000299705 Q6ZQY7 126 aa10.69□□□□□ -0.7
TMED3-201ENST00000299705 NAA38Q9BRA0 125 aaKnown RBP10.69□□□□□ -0.7
TMED3-201ENST00000299705 TEX49A0A1B0GTD5 131 aa10.68□□□□□ -0.7
TMED3-201ENST00000299705 LINC01547P58512 204 aaPredicted RBP10.68□□□□□ -0.7
TMED3-201ENST00000299705 H3BUT2 72 aa10.68□□□□□ -0.7
TMED3-201ENST00000299705 PRR26Q8N8Z3 221 aa10.68□□□□□ -0.7
TMED3-201ENST00000299705 A0A087X002 238 aa10.67□□□□□ -0.7
TMED3-201ENST00000299705 OCIAD2Q56VL3 154 aa10.67□□□□□ -0.7
TMED3-201ENST00000299705 LYRM7Q5U5X0 104 aa10.67□□□□□ -0.7
TMED3-201ENST00000299705 DEFB105AQ8NG35 78 aa10.67□□□□□ -0.7
TMED3-201ENST00000299705 LST1O00453 97 aa10.66□□□□□ -0.7
TMED3-201ENST00000299705 TRACP01848 142 aa10.65□□□□□ -0.7
TMED3-201ENST00000299705 KRTAP10-8P60410 259 aa10.65□□□□□ -0.7
TMED3-201ENST00000299705 Q8N377 158 aa10.65□□□□□ -0.7
TMED3-201ENST00000299705 MYCBP2O75592 4640 aa10.65□□□□□ -0.71
TMED3-201ENST00000299705 PPDPFLQ8WWR9 84 aa10.64□□□□□ -0.71
TMED3-201ENST00000299705 LRP1Q07954 4544 aaKnown RBP10.64□□□□□ -0.71
TMED3-201ENST00000299705 DNAL4O96015 105 aa10.63□□□□□ -0.71
TMED3-201ENST00000299705 MT1HL1P0DM35 61 aa10.63□□□□□ -0.71
TMED3-201ENST00000299705 KRTAP13-2Q52LG2 175 aa10.63□□□□□ -0.71
TMED3-201ENST00000299705 FAT3Q8TDW7 4589 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms